Showing: snpreset
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105
votes
8
answers
40k
views
50 follow
8
answers
Workflow Or Tutorial For Snp Calling?
alignment next-gen samtools snp sequencing written 8.6 years ago by Matthieu430 • updated 3.7 years ago by alexisdereeper30
66
votes
7
answers
28k
views
36 follow
7
answers
Plotting Density Of Snps On Chromosomes
snp plot written 7.7 years ago by Leszek4.0k • updated 2.4 years ago by kaixian1100
96
votes
8
answers
26k
views
30 follow
8
answers
What Methods Do You Use For In/Del/Snp Calling?
short aligner snp sequencing written 9.7 years ago by Pierre Lindenbaum124k • updated 6.1 years ago by Biostar ♦♦ 20
52
votes
4
answers
35k
views
30 follow
4
answers
Filtering Vcf File
vcf indel vcftools snp written 7.3 years ago by bioinfo740 • updated 2.1 years ago by DataFanatic140
59
votes
4
answers
34k
views
28 follow
4
answers
How To Analyze Imputed Gwas Data
gwas imputation plink snp R written 8.7 years ago by Stephen2.7k • updated 3.0 years ago by ShirleyDai40
30
votes
6
answers
20k
views
26 follow
6
answers
Amino Acid Change To Genomic Location
amino-acids snp written 7.9 years ago by Preethi110 • updated 3.9 years ago by michael.d.mclellan150
23
votes
2
answers
5.2k
views
25 follow
2
answers
Best tool for variant calling
genome alignment next-gen snp written 18 months ago by williamsbrian5064210 • updated 12 months ago by claire0
84
votes
8
answers
15k
views
24 follow
8
answers
Good Gwas Papers / Resources
gwas literature snp written 9.4 years ago by brentp23k • updated 9.4 years ago by Larry_Parnell16k
50
votes
6
answers
21k
views
24 follow
6
answers
Get rs number based on position
mysql snp ucsc written 8.5 years ago by Zach Stednick650 • updated 13 months ago by zx87548.8k
53
votes
4
answers
18k
views
23 follow
4
answers
How To Map A Snp To A Gene Around +/- 60Kb ?
data snp human annotation written 9.7 years ago by Khader Shameer18k • updated 9.7 years ago by Aaronquinlan11k
18
votes
6
answers
10k
views
22 follow
6
answers
Where Can I Download Vcf Files For Publicly Available Data?
vcf snp download written 8.0 years ago by Kevin630 • updated 5.5 years ago by e.cirillo89230
51
votes
3
answers
15k
views
22 follow
3
answers
1000 Genomes Snps' Ancestral Allele
1000genomes snp written 6.9 years ago by seaboy120
81
votes
5
answers
33k
views
21 follow
5
answers
Ti/Tv Ratio Confirms Snp Discovery. Is This A General Rule?
snp written 8.9 years ago by Yahan200 • updated 6.1 years ago by Biostar ♦♦ 20
31
votes
3
answers
6.6k
views
19 follow
3
answers
LD-decay in a r2 vs distance(cm) plot
R snp written 21 months ago by adele40 • updated 21 months ago by hewm200820
97
votes
11
answers
21k
views
18 follow
11
answers
Disease Associated Snps
gwas database snp written 9.5 years ago by pixie@bioinfo1.4k • updated 5.9 years ago by vaibhav0
49
votes
7
answers
34k
views
18 follow
7
answers
How Can I Merge A Large Amount Of Vcf Files?
vcf merge vcftools snp written 7.4 years ago by Matt W240 • updated 17 months ago by ATpoint26k
31
votes
7
answers
8.6k
views
18 follow
7
answers
Variant Function Prediction
variant effect snp written 5.7 years ago by User 1933340 • updated 3.7 years ago by christopher medway440
25
votes
3
answers
2.4k
views
18 follow
3
answers
How to get sample names and genotype for SNP in multi-sample VCF file
gatk genotype snp written 22 months ago by hellbio380 • updated 17 months ago by Pierre Lindenbaum124k
65
votes
12
answers
13k
views
17 follow
12
answers
Mapping Snps To Pathways
pathway gene genotyping snp enrichment written 9.8 years ago by Pierre Lindenbaum124k • updated 8.3 years ago by Vova Naumov220
39
votes
6
answers
23k
views
17 follow
6
answers
Sift Or Polyphen
non mutation snp written 8.7 years ago by Dataminer2.6k • updated 17 days ago by always_learning1000
28
votes
3
answers
20k
views
17 follow
3
answers
How Can I Count Snps In My Vcf Files?
vcf snp awk written 7.4 years ago by Matt W240 • updated 4.3 years ago by ravi.uhdnis170
35
votes
5
answers
11k
views
16 follow
5
answers
Visualize Effect Of Snp Variant On Protein Structure
protein visualization structure snp written 9.6 years ago by Hanif Khalak1.2k • updated 2.8 years ago by GabrielMontenegro540
40
votes
6
answers
56k
views
16 follow
6
answers
Synonymous And Non-Synonymous Snps
non snp written 8.9 years ago by Elena240 • updated 4.8 years ago by HG1.1k
34
votes
2
answers
20k
views
15 follow
2
answers
Homozygous Indel/Snp & Heterozygous Indel/Snp
snp written 6.3 years ago by always_learning1000 • updated 2.4 years ago by ibseq120
40
votes
7
answers
9.0k
views
14 follow
7
answers
Eqtl Database Available?
gene database eqtl snp written 8.7 years ago by Krisr460 • updated 8.7 years ago by Argossy40
12
votes
3
answers
16k
views
14 follow
3
answers
How To Construct Phylogenetic Tree Using Snps
phylogenetics snp written 7.8 years ago by Zhu100 • updated 4.9 years ago by Biostar ♦♦ 20
34
votes
3
answers
21k
views
14 follow
3
answers
33
votes
5
answers
5.2k
views
13 follow
5
answers
Short Read Aligners/ Snp Calling Comparison
sequencing next-gen mapping snp comparison written 9.1 years ago by Pierre Lindenbaum124k • updated 6.0 years ago by Biostar ♦♦ 20
26
votes
3
answers
2.8k
views
13 follow
3
answers
29
votes
4
answers
12k
views
13 follow
4
answers
Get Flanking Sequence Given A List Of Positions
sequence biomart galaxy snp ucsc written 8.7 years ago by Stephen2.7k • updated 6.2 years ago by Biostar ♦♦ 20
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