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304
votes
10
answers
105k
views
154 follow
10
answers
Tool: Gnu Parallel - Parallelize Serial Command Line Programs Without Changing Them
parallel tools next-gen ngs tool written 5.8 years ago by ole.tange3.3k • updated 6 months ago by suny.bio0
147
votes
3
answers
73k
views
89 follow
3
answers
44
votes
1
answer
21k
views
49 follow
1
answer
58
votes
1
answer
16k
views
21 follow
1
answer
25
votes
3
answers
13k
views
10 follow
3
answers
18
votes
16
answers
12k
views
14 follow
16
answers
33
votes
1
answer
11k
views
14 follow
1
answer
Tool: Aligning Sequence Reads, Clone Sequences And Assembly Contigs With Bwa-Mem
ngs tool bwa written 5.7 years ago by lh331k • updated 5.5 years ago by David Langenberger8.4k
5
votes
0
answers
11k
views
0
answers
17
votes
0
answers
11k
views
16 follow
0
answers
Tool: Tools to merge overlapping paired-end reads
assembly overlapping ngs fastq tool written 2.0 years ago by Abdul Rafay Khan890 • updated 4 months ago by kate.j.mckenzie0
20
votes
0
answers
10k
views
10 follow
0
answers
49
votes
8
answers
8.7k
views
17 follow
8
answers
7
votes
0
answers
8.7k
views
6 follow
0
answers
Tool: Art: Simulation Tools To Generate Synthetic Next-Generation Sequencing Reads.
sequence tool written 6.5 years ago by Istvan Albert ♦♦ 78k • updated 3.8 years ago by geek_y8.8k
4
votes
0
answers
8.5k
views
0
answers
Tool: LinkedIn PubMed Importer
pubmed linkedin tool doi greasemonkey written 3.3 years ago by Jorge Amigo11k
56
votes
1
answer
7.4k
views
34 follow
1
answer
13
votes
5
answers
7.2k
views
11 follow
5
answers
54
votes
10
answers
7.0k
views
9 follow
10
answers
Tool: Bedtools: Analyzing Genomic Features
bedtools tool written 6.6 years ago by Istvan Albert ♦♦ 78k • updated 4.0 years ago by Aaronquinlan10k
27
votes
2
answers
6.9k
views
19 follow
2
answers
28
votes
0
answers
6.8k
views
16 follow
0
answers
Tool: Snakemake--Python-Based Workflow Management
python workflow tool written 5.0 years ago by Sean Davis25k • updated 6 weeks ago by carlopecoraro2780
21
votes
3
answers
6.4k
views
7 follow
3
answers
Tool: Segemehl: A Fast One-Stop-Shop Mapping Tool
next-gen mapping tool written 6.2 years ago by David Langenberger8.4k • updated 4.3 years ago by enxxx23200
21
votes
1
answer
6.3k
views
1
answer
Tool: Salmon: A fast and versatile new tool for RNA-seq quantification
tool rna-seq written 4.0 years ago by Rob2.9k • updated 3.2 years ago by nico50
24
votes
0
answers
6.2k
views
13 follow
0
answers
Tool: Quast Is A Convenient Tool For Assembly Evaluation
assembly quality tool written 5.8 years ago by Nikolay Vyahhi1.2k • updated 2.5 years ago by Vijay Lakhujani3.4k
9
votes
0
answers
6.2k
views
0
answers
37
votes
4
answers
6.2k
views
4
answers
Tool: pybam - 100% python BAM reader
htspython python bam pysam tool written 2.7 years ago by John12k
7
votes
2
answers
6.2k
views
10 follow
2
answers
15
votes
0
answers
6.1k
views
8 follow
0
answers
Tool: Vcflib Documentation
vcf tool written 5.7 years ago by Erik Garrison2.1k • updated 13 months ago by DataFanatic110
5
votes
0
answers
6.0k
views
0
answers
29
votes
1
answer
5.9k
views
12 follow
1
answer
Tool: FASTA and FASTQ tools
fasta python fastq c++ tool written 3.5 years ago by Kamil1.9k
4
votes
1
answer
5.8k
views
1
answer
Tool: Masc - A Tool For Calculating Mean Fragment Size For Chip-Seq Peak Calling Analysis
chip-seq tool written 5.8 years ago by Ian5.3k • updated 2.3 years ago by DataFanatic110
15
votes
5
answers
5.7k
views
17 follow
5
answers
2
votes
0
answers
5.7k
views
0
answers
Tool: Snprelate: A Toolset For Relatedness And Principal Component Analysis Of Snp Data
R parallel pca tool written 5.8 years ago by zx87546.1k • updated 5.8 years ago by Istvan Albert ♦♦ 78k
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