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304
votes
10
answers
104k
views
154 follow
10
answers
Tool: Gnu Parallel - Parallelize Serial Command Line Programs Without Changing Them
parallel tools next-gen ngs tool written 5.8 years ago by ole.tange3.3k • updated 6 months ago by suny.bio0
147
votes
3
answers
73k
views
89 follow
3
answers
49
votes
2
answers
3.5k
views
38 follow
2
answers
Tool: karyoploteR: uncircle your genomes
dataviz R next-gen tool karyoploter written 18 months ago by bernatgel1.4k • updated 6 months ago by Vijay Lakhujani3.4k
48
votes
2
answers
5.7k
views
46 follow
2
answers
Tool: list of dockerized bioinformatics apps
forum docker tool written 4.1 years ago by 141341254653464453.4k • updated 3.6 years ago by Andreas2.4k
52
votes
3
answers
3.2k
views
10 follow
3
answers
44
votes
1
answer
21k
views
49 follow
1
answer
55
votes
7
answers
1.9k
views
9 follow
7
answers
Tool: ASCIIGenome: Text Only Genome Viewer!
genome browser java asciigenome tool terminal written 2.4 years ago by dariober9.7k • updated 6 weeks ago by quokka10
49
votes
8
answers
8.7k
views
17 follow
8
answers
56
votes
1
answer
7.3k
views
34 follow
1
answer
33
votes
1
answer
11k
views
14 follow
1
answer
Tool: Aligning Sequence Reads, Clone Sequences And Assembly Contigs With Bwa-Mem
ngs tool bwa written 5.7 years ago by lh331k • updated 5.5 years ago by David Langenberger8.4k
48
votes
2
answers
4.6k
views
30 follow
2
answers
29
votes
1
answer
5.9k
views
12 follow
1
answer
Tool: FASTA and FASTQ tools
fasta python fastq c++ tool written 3.5 years ago by Kamil1.9k
25
votes
0
answers
3.2k
views
13 follow
0
answers
Tool: Dgidb - Mining The Druggable Genome
tool database dgidb interaction gene drug written 5.2 years ago by Obi Griffith17k • updated 4.0 years ago by Malachi Griffith17k
26
votes
1
answer
1.7k
views
1
answer
22
votes
0
answers
4.2k
views
0
answers
Tool: Plotting GSEA output in R
javagsea plot tool rna-seq gsea written 2.3 years ago by t.kuilman710
24
votes
0
answers
6.2k
views
13 follow
0
answers
Tool: Quast Is A Convenient Tool For Assembly Evaluation
assembly quality tool written 5.8 years ago by Nikolay Vyahhi1.2k • updated 2.5 years ago by Vijay Lakhujani3.4k
37
votes
4
answers
6.2k
views
4
answers
Tool: pybam - 100% python BAM reader
htspython python bam pysam tool written 2.7 years ago by John12k
22
votes
2
answers
886
views
21 follow
2
answers
54
votes
10
answers
7.0k
views
9 follow
10
answers
Tool: Bedtools: Analyzing Genomic Features
bedtools tool written 6.6 years ago by Istvan Albert ♦♦ 78k • updated 3.9 years ago by Aaronquinlan10k
20
votes
0
answers
10k
views
10 follow
0
answers
58
votes
1
answer
16k
views
21 follow
1
answer
23
votes
0
answers
4.8k
views
0
answers
Tool: ggtree: phylogenetic tree visualization and annotation
phylogeny ggtree visualization tool written 2.4 years ago by Guangchuang Yu2.0k • updated 3 months ago by abdul.suboor1230
18
votes
0
answers
2.1k
views
10 follow
0
answers
33
votes
2
answers
4.9k
views
9 follow
2
answers
Tool: Bwa-Meth: Align And Tabulate Bs-Seq Reads
methylation tool written 4.8 years ago by brentp22k • updated 4.5 years ago by widlowy0
19
votes
2
answers
5.4k
views
8 follow
2
answers
21
votes
0
answers
757
views
23 follow
0
answers
25
votes
1
answer
2.3k
views
16 follow
1
answer
Tool: Quick statistics from the command line
C tool statistics written 3.4 years ago by Kamil1.9k • updated 3.4 years ago by Istvan Albert ♦♦ 78k
21
votes
1
answer
6.2k
views
1
answer
Tool: Salmon: A fast and versatile new tool for RNA-seq quantification
tool rna-seq written 4.0 years ago by Rob2.9k • updated 3.2 years ago by nico50
17
votes
0
answers
4.0k
views
9 follow
0
answers
17
votes
0
answers
10k
views
16 follow
0
answers
Tool: Tools to merge overlapping paired-end reads
assembly overlapping ngs fastq tool written 2.0 years ago by Abdul Rafay Khan890 • updated 4 months ago by kate.j.mckenzie0
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