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302
votes
10
answers
102k
views
152 follow
10
answers
Tool: Gnu Parallel - Parallelize Serial Command Line Programs Without Changing Them
parallel tools next-gen ngs tool written 5.6 years ago by ole.tange3.2k • updated 4 months ago by suny.bio0
142
votes
3
answers
69k
views
87 follow
3
answers
47
votes
2
answers
3.2k
views
36 follow
2
answers
Tool: karyoploteR: uncircle your genomes
dataviz R next-gen tool karyoploter written 15 months ago by bernatgel1.2k • updated 4 months ago by Vijay Lakhujani3.0k
48
votes
2
answers
5.5k
views
46 follow
2
answers
Tool: list of dockerized bioinformatics apps
forum docker tool written 3.9 years ago by 141341254653464453.4k • updated 3.3 years ago by Andreas2.4k
52
votes
3
answers
3.1k
views
10 follow
3
answers
49
votes
8
answers
8.5k
views
17 follow
8
answers
42
votes
1
answer
19k
views
47 follow
1
answer
50
votes
7
answers
1.7k
views
7
answers
54
votes
1
answer
6.1k
views
30 follow
1
answer
33
votes
1
answer
10k
views
14 follow
1
answer
Tool: Aligning Sequence Reads, Clone Sequences And Assembly Contigs With Bwa-Mem
ngs tool bwa written 5.5 years ago by lh331k • updated 5.3 years ago by David Langenberger8.2k
48
votes
2
answers
4.3k
views
30 follow
2
answers
29
votes
1
answer
5.4k
views
12 follow
1
answer
Tool: FASTA and FASTQ tools
fasta python fastq c++ tool written 3.3 years ago by Kamil1.8k
26
votes
1
answer
1.5k
views
1
answer
25
votes
0
answers
3.0k
views
13 follow
0
answers
Tool: Dgidb - Mining The Druggable Genome
tool database dgidb interaction gene drug written 4.9 years ago by Obi Griffith17k • updated 3.8 years ago by Malachi Griffith16k
22
votes
0
answers
3.5k
views
0
answers
Tool: Plotting GSEA output in R
javagsea plot tool rna-seq gsea written 2.1 years ago by t.kuilman470
24
votes
0
answers
6.0k
views
13 follow
0
answers
Tool: Quast Is A Convenient Tool For Assembly Evaluation
assembly quality tool written 5.6 years ago by Nikolay Vyahhi1.2k • updated 2.2 years ago by Vijay Lakhujani3.0k
54
votes
10
answers
6.8k
views
9 follow
10
answers
Tool: Bedtools: Analyzing Genomic Features
bedtools tool written 6.4 years ago by Istvan Albert ♦♦ 77k • updated 3.7 years ago by Aaronquinlan10k
37
votes
4
answers
5.5k
views
4
answers
Tool: pybam - 100% python BAM reader
htspython python bam pysam tool written 2.4 years ago by John12k
58
votes
1
answer
16k
views
21 follow
1
answer
33
votes
2
answers
4.7k
views
9 follow
2
answers
Tool: Bwa-Meth: Align And Tabulate Bs-Seq Reads
methylation tool written 4.6 years ago by brentp22k • updated 4.3 years ago by widlowy0
19
votes
0
answers
9.9k
views
9 follow
0
answers
18
votes
0
answers
2.0k
views
10 follow
0
answers
23
votes
0
answers
4.3k
views
0
answers
Tool: ggtree: phylogenetic tree visualization and annotation
phylogeny ggtree visualization tool written 2.2 years ago by Guangchuang Yu1.9k • updated 4 weeks ago by abdul.suboor1230
19
votes
2
answers
5.2k
views
8 follow
2
answers
25
votes
1
answer
2.2k
views
16 follow
1
answer
Tool: Quick statistics from the command line
C tool statistics written 3.2 years ago by Kamil1.8k • updated 3.2 years ago by Istvan Albert ♦♦ 77k
17
votes
0
answers
3.9k
views
9 follow
0
answers
21
votes
1
answer
6.1k
views
1
answer
Tool: Salmon: A fast and versatile new tool for RNA-seq quantification
tool rna-seq written 3.8 years ago by Rob2.6k • updated 3.0 years ago by nico50
17
votes
0
answers
8.7k
views
16 follow
0
answers
Tool: Tools to merge overlapping paired-end reads
assembly overlapping ngs fastq tool written 21 months ago by Abdul Rafay Khan880 • updated 7 weeks ago by kate.j.mckenzie0
27
votes
2
answers
2.4k
views
2
answers
27
votes
0
answers
6.4k
views
13 follow
0
answers
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