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<prev • 121 results • page 1 of 5 • next >
3
votes
0
answers
283
views
0
answers
Assembly statistics: ABySS & BBMap
assembly bbmap abyss written 8 weeks ago by el97004 • 10
0
votes
1
answer
85
views
1
answer
Removing adapters for assembly
assembly abyss written 4 weeks ago by Ric • 280 • updated 4 weeks ago by Mensur Dlakic • 2.5k
0
votes
1
answer
102
views
1
answer
Convert abyss scaffolds to contigs
contigs abyss written 5 weeks ago by jm440 • 0 • updated 5 weeks ago by h.mon ♦ 28k
1
vote
0
answers
96
views
0
answers
abyss config/scaffold fasta file headers
abyss written 6 weeks ago by jm440 • 0
3
votes
0
answers
145
views
0
answers
Using ABySS to find unitigs in metagenomes
metagenome unitig abyss-pe abyss written 8 weeks ago by nsapoval • 0
3
votes
1
answer
182
views
1
answer
Does Abyss work on single-end Illumina reads only?
abyss written 9 weeks ago by DNAngel • 40 • updated 9 weeks ago by Charles Warden ♦ 7.5k
1
vote
0
answers
168
views
0
answers
abyss-pe crashes when ran on 650k+ reads
software error assembly abyss written 9 weeks ago by nsapoval • 0
2
votes
0
answers
107
views
0
answers
abyss: troubleshoot assembly
assembly abyss written 4 months ago by yp19 • 50
0
votes
0
answers
179
views
0
answers
ABySS OpenMP version
abyss written 5 months ago by daveturner • 0 • updated 5 months ago by lieven.sterck ♦ 6.4k
5
votes
2
answers
498
views
6 follow
2
answers
Assembler for only nanopore data
assembly genomics abyss ont written 8 months ago by ringourquia • 20 • updated 7 months ago by harish • 240
0
votes
0
answers
212
views
0
answers
Checkpointing with abyss after hashing input files
genome assembly abyss de novo sequencing written 8 months ago by Dave • 0
3
votes
1
answer
362
views
1
answer
Abyss genome assembly on several nodes
node abyss written 10 months ago by Igor Lalin • 0
1
vote
0
answers
427
views
0
answers
Abyss (Optimizing the parameter k)
assembly kmer abyss written 13 months ago by Mbillah • 110 • updated 12 months ago by Biostar ♦♦ 20
9
votes
1
answer
637
views
5 follow
1
answer
ABySS path setup for temporary files
assembly abyss written 13 months ago by Mbillah • 110 • updated 13 months ago by colindaven • 1.9k
0
votes
0
answers
394
views
0
answers
Abyss run time
assembly abyss written 13 months ago by Mbillah • 110
0
votes
1
answer
704
views
1
answer
Assembly with ABySS, Kmer optimisation
assembly kmer abyss written 14 months ago by lieven.sterck ♦ 6.4k
0
votes
0
answers
1.7k
views
0
answers
abyss fixmate error
abyss written 4.2 years ago by rebzi87 • 0 • updated 14 months ago by Biostar ♦♦ 20
3
votes
1
answer
994
views
1
answer
"brew install brewsci/bio/abyss" doesn't work - no formula
abyss written 19 months ago by zhaoh • 0 • updated 14 months ago by Shaun Jackman • 420
1
vote
1
answer
331
views
1
answer
Make error for abyss-PE with many libraries
assembly abyss written 15 months ago by ck178807 • 0 • updated 14 months ago by benv • 710
0
votes
0
answers
443
views
0
answers
ABySS min = 500 ; how to change it
de novo assembly abyss sequencing written 17 months ago by philousap10 • 0
1
vote
2
answers
1.3k
views
2
answers
Bosst configure error
assembly abyss written 3.3 years ago by Andrey Yurchenko • 10 • updated 18 months ago by Biostar ♦♦ 20
0
votes
0
answers
574
views
0
answers
Comparing Assemblies and Breaking Inconsistent Contigs
genome quickmerge dbg2olc masurca abyss written 19 months ago by EarlyEvol • 0
0
votes
0
answers
621
views
0
answers
Abyss Error when running Collector
assembly abyss written 20 months ago by claire.morandin • 0 • updated 20 months ago by genomax ♦ 75k
2
votes
0
answers
1.2k
views
0
answers
ABySS 1.9.0 error at bwa index step
assembly abyss written 3.5 years ago by cmstouthamer • 10 • updated 21 months ago by Biostar ♦♦ 20
0
votes
3
answers
1.8k
views
3
answers
abyss-pe reading files endlessly with se command added
assembly paired-end miseq abyss written 3.8 years ago by pepijn.kooij • 0 • updated 22 months ago by Biostar ♦♦ 20
3
votes
1
answer
688
views
1
answer
How does the memory requirements of abyss scale ?
assembly abyss written 22 months ago by lieven.sterck ♦ 6.4k • updated 22 months ago by benv • 710
1
vote
1
answer
595
views
1
answer
Is the Abyss contig and scaffold phased?
genome assembly abyss written 23 months ago by wjar6718 • 0 • updated 23 months ago by benv • 710
2
votes
0
answers
952
views
0
answers
unrecognized error in the abyss assembly software
assembly abyss written 23 months ago by xuchuan • 0
4
votes
1
answer
1.6k
views
1
answer
Assembly with mate-pairs issue
assembly abyss mate-pairs written 3.7 years ago by lieven.sterck ♦ 6.4k • updated 23 months ago by Shaun Jackman • 420
3
votes
1
answer
859
views
1
answer
SNP calling from a scaffold.fa file
fasta snp calling abyss written 2.0 years ago by shynilasanthi • 30 • updated 2.0 years ago by pfs • 270
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