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2
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1
answer
79
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1
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How to figure out which adapter has been used
adapter trimming degradome written 2 days ago by juan.crescente • 20 • updated 2 days ago by genomax ♦ 64k
5
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1
answer
171
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1
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What sequences should I use for ATAC-Seq adapter trimming using trimmomatic 0.36?
trimmomatic trimming adapter atac-seq written 20 days ago by Gary • 450 • updated 19 days ago by h.mon ♦ 24k
9
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2
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632
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2
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When do you strictly need to know the adapter sequence to trim NGS data?
trimming ngs adapter written 7 months ago by MAPK • 1.4k • updated 7 months ago by Gjain ♦ 5.3k
5
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1
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307
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5 follow
1
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How do I completely get rid of adapter sequence
trimming smallrnaseq adapter written 7 months ago by MAPK • 1.4k
2
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1
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350
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1
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How do you decide the minimum length for the adapter that needs trimming for small RNAseq
trimmomatic trimming smallrnaseq adapter written 8 months ago by MAPK • 1.4k
0
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0
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458
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0
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miRNA-seq Trimmomatic adapter file
trimmomatic adapter mirna-seq written 8 months ago by inah • 20 • updated 8 months ago by WouterDeCoster ♦ 37k
11
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2
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716
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5 follow
2
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Adapter trimming of small RNAseq data
adapter smallrnaseq trimming rna-seq written 8 months ago by MAPK • 1.4k • updated 8 months ago by Brad Langhorst • 110
0
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0
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317
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0
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Find adapter sequences
fasta adapter sequencing fastq fastqc written 8 months ago by science_lizard • 0
3
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2
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456
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2
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How to determine which adapter to use while trimming?
trimmomatic ngs fastq adapter written 8 months ago by MAPK • 1.4k • updated 8 months ago by sschmeier • 80
3
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1
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322
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1
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How to trim adapters from fastq having 8mer+8mer bar-code
illumina ngs fastq adapter barcode written 9 months ago by rice.researcher • 130 • updated 9 months ago by Devon Ryan ♦ 88k
0
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1
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308
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1
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What value shoould be filled at Choose Adapter Clip adapter sequences Galaxy
adapter galaxy clip choose adapter written 9 months ago by Kian • 40 • updated 9 months ago by Devon Ryan ♦ 88k
0
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2
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1.1k
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2
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Finding adapters in sequences
16s adapter written 12 months ago by genomics Newbie • 20 • updated 12 months ago by genomax ♦ 64k
1
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1
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1.0k
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1
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trimming RNA-seq reads with adapter sequence?index? using trimmomatic
trimmomatic adapter rna-seq trim written 15 months ago by woongjaej • 10 • updated 15 months ago by Jake Warner • 680
1
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0
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542
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0
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Trim read-specific adapter in paired-end reads
adapter trim written 16 months ago by Nicolas Rosewick ♦ 7.4k
8
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1
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1.0k
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1
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Additional sequences in adapter file cause trimming problem?
trimmomatic adapter trimming bbtools written 19 months ago by Anand Rao • 210
4
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0
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603
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0
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Trimming adapters with custom scoring
reads sequence fastq alignment adapter written 19 months ago by aka001 • 190
0
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0
answers
819
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0
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k-mer overrepresentation of WGS Illumina reads
k-mer trimmomatic adapter trimming fastqc written 19 months ago by Anand Rao • 210
5
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1
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1.4k
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1
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Interpreting pre- and post-trim_galore FastQC results
illumina adapter trimming fastqc written 20 months ago by Anand Rao • 210 • updated 20 months ago by genomax ♦ 64k
0
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0
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811
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0
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Please advise me on PE sequencing reads prepared by NEBNex kit and Hiseq2000
illumina adapter length nebnex kit fastqc written 23 months ago by seta • 1.1k
2
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0
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1.7k
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0
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Help with Trimmomatic 0.36 Error
trimmomatic adapter sequencing written 2.1 years ago by jrh154 • 0
3
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1
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1.4k
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5 follow
1
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TrimGalore parameter form Nextera paired-end reads adapter removal
illumina adapter nextera trimming sequencing written 2.1 years ago by gundalav • 260 • updated 2.1 years ago by Devon Ryan ♦ 88k
3
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2
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1.6k
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2
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Why mapping rate is low after adapter trimming paired-end data?
sequencing adapter alignment trim_galore cutadapt written 2.1 years ago by gundalav • 260 • updated 2.1 years ago by dariober ♦ 9.9k
5
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0
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2.2k
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0
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Problems with Trimmomatic PE output files
trimmomatic adapter rna-seq fastqc written 2.2 years ago by hinkel2 • 10 • updated 2.2 years ago by genomax ♦ 64k
2
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2
answers
612
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2
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Finding foreign sequences in an NGS experiment
ngs adapter blastn written 2.3 years ago by predeus • 860 • updated 2.3 years ago by Farbod • 3.2k
4
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2
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2.5k
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2
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How can I deal with adapter contamination in next-gen sequencing reads?
illumina adapter next-gen sequencing written 3.4 years ago by gbdias • 60 • updated 2.5 years ago by Biostar ♦♦ 20
110
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4
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13k
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4
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Forum: Trimming adapter sequences - is it necessary?
ngs adapter forum rna-seq written 2.5 years ago by Lars • 640 • updated 2.5 years ago by David Langenberger ♦ 8.7k
0
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0
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1.3k
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0
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Trimming adapters from miRNA-seq
trimming micrornas adapter rna-seq sequencing written 2.6 years ago by v82masae • 120
0
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2
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1.4k
views
2
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Adapter trimming in basespace
adapter general written 2.8 years ago by kanwarjag • 930 • updated 2.8 years ago by kirannbishwa01 • 950
0
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2
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1.2k
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2
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How to figure out adapter sequence for Illumina reads?
adapter sequence rna-seq written 3.1 years ago by mmrcksn • 50 • updated 3.1 years ago by genomax ♦ 64k
0
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2.2k
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0
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Which strand does the illumina sequencing platform output into fastq file under pair-end mode
adapter dna sequencing written 3.3 years ago by Roden Luo • 10
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