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<prev • 35 results • page 1 of 2 • next >
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Statistical Genetics - What information is required for haplotype phasing in a novel, admixed population?
exome haplotype admixture phasing written 9 days ago by anp375 • 120
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3
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899
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Admixture cv error
cv error rates admixture structure written 2.1 years ago by s.bourne • 0 • updated 12 days ago by Biostar ♦♦ 20
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Generating an ADMIXTURE plot that stacks the different values of K using R
R admixture written 2.2 years ago by devenvyas • 480 • updated 4 months ago by Biostar ♦♦ 20
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How long does it takes to get Admixture analysis done?
admixture snp written 7 months ago by lionair • 10
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Estimating heritability using GCTA or LDAK in an admixed population
heritability admixture gcta written 18 months ago by GabrielMontenegro • 360 • updated 8 months ago by akang • 90
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762
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Should replicate analyses of ADMIXTURE all have the same cross-validation values
admixture written 2.2 years ago by devenvyas • 480 • updated 10 months ago by Santiago Montero-Mendieta • 90
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364
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1
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Convert and filter VCF by a pre-existing BIM
vcf admixture plink written 10 months ago by jlawlor • 0 • updated 10 months ago by chrchang523 ♦ 3.1k
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1
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Converting a big SNP genotype table to plink (.ped) file for ADMIXTURE
perl snp admixture plink ped format written 11 months ago by Santiago Montero-Mendieta • 90 • updated 11 months ago by Philipp Bayer ♦ 5.4k
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378
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Power of ADMXITURE mapping
gwas admixture power written 14 months ago by GabrielMontenegro • 360 • updated 12 months ago by Petr Ponomarenko • 2.5k
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353
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Running R for an individual; checking admixture
R admixture plink individual written 14 months ago by beneficii • 30
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1
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1
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Problem using plink file with ADMIXTURE
genome admixture plink linux written 14 months ago by beneficii • 30 • updated 14 months ago by Philipp Bayer ♦ 5.4k
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ADMIXTURE: "Invalid chromosome code. Use integers!"
genome admixture written 14 months ago by beneficii • 30
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Checking admixture with VCF and BAM files
admixture human written 14 months ago by beneficii • 30
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How to order Admixture (ancestry) plot in R
R admixture q plot written 15 months ago by beausoleilmo • 180 • updated 15 months ago by Joseph Hughes • 2.5k
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799
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Can't figure out order of output rows in ADMIXTURE
admixture written 17 months ago by jenn.drummond • 30 • updated 15 months ago by beausoleilmo • 180
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1.4k
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Help making ADMIXTURE output digestible
admixture written 2.7 years ago by devenvyas • 480 • updated 15 months ago by beausoleilmo • 180
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495
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ADMIXTURE, size of .bed file not matching number of individuals in analysis
admixture written 15 months ago by beausoleilmo • 180
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722
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Placing labels in the plot
R label admixture plot written 20 months ago by akang • 90
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542
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Correcting for multiple testing in Admixture Mapping in Latinos
genome gwas admixture written 21 months ago by GabrielMontenegro • 360
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533
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CV error in admixture and submiting the job on the cluster
human population genetics cv error admixture hpc written 22 months ago by dirranrak • 10
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634
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Admixture cv = -nan
software error sequence admixture snp written 2.0 years ago by jcolella.jc • 0
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Why is my ADMIXTURE random seed always 43
admixture written 2.2 years ago by devenvyas • 480 • updated 2.2 years ago by Chris Miller ♦ 19k
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752
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Perplexing ADMIXTURE results - one component present at K =10 disappears at 11, reappears at 12
admixture snp written 2.3 years ago by devenvyas • 480
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F3 test for admixture
f3-test treeness admixture written 2.4 years ago by abascalfederico • 1.0k • updated 2.3 years ago by Biostar ♦♦ 20
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Formulating the best imputation strategy for multiple GWAS chips in an admixed population
gwas imputation admixture meta analysis written 2.5 years ago by Vincent Laufer • 880
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Standard error of cross-validation estimates in software ADMIXTURE
admixture written 2.5 years ago by manfred.mayer5 • 0
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769
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Looking for a quick way of consistently order components between different ADMIXTURE analyses
admixture written 2.6 years ago by devenvyas • 480
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994
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Change output name for ADMIXTURE analysis
admixture written 2.6 years ago by devenvyas • 480
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admixture mapping of african americans
admixture structure written 2.6 years ago by PJ8900 • 0
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What is a bad lowest-CV value for Admixture?
cv admixture snp written 2.7 years ago by devenvyas • 480 • updated 2.7 years ago by Vincent Laufer • 880
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