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Confused about the AF tag in VCF from samtools/bcftools mpileup
vcf gatk samtools af variants written 25 days ago by Makplus T70 • updated 25 days ago by Renesh1.9k
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VEP and gnomAD AF inconsistencies
ensembl vep gnomad af dbnsfp written 11 weeks ago by cocchi.e8980 • updated 11 weeks ago by Ben_Ensembl1.5k
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How to use bcftools to calculate AF INFO field from AC and AN in VCF?
vcf samtools bcftools af written 4.4 years ago by Nicholas Blackburn100 • updated 5 months ago by Ks-seq10
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Plotting Allele Frequencies
ad causative variant variant analysis af dp written 12 months ago by kristina.mahan60 • updated 12 months ago by h.mon30k
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How to extract total allele frequency from gnomAD annotation
allelefrequency af gnmoad written 18 months ago by yasminsoareslima10 • updated 16 months ago by lecob0
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computing the AF (allele fraction) for SV
sv structural variants af cancer genome written 2.6 years ago by Bogdan1000 • updated 2.6 years ago by Biostar ♦♦ 20
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strange rules from VCF file
vcf gq qd af written 3.5 years ago by wendy19888160 • updated 3.4 years ago by Biostar ♦♦ 20
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