Showing: alignerreset
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To screen for a good aligner
aligner blast written 13 days ago by deepti1rao0 • updated 13 days ago by Macspider1.2k
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INDEL left alignment in bam and vcf
indel aligner bowtie bwa blasr written 6 months ago by mark.rose10 • updated 6 months ago by Brian Bushnell13k
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Problem installing STAR on Mac OSX
installation aligner star written 9 months ago by cristian70 • updated 9 months ago by khericlim330
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760
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Annoying STAR aligner problem
aligner star written 12 months ago by Biogeek240
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HTS protein to protein aligner or DNA to Protein aligner
alignment parameters aligner scoring matrix written 13 months ago by swttalyan10 • updated 13 months ago by Asaf4.1k
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Mapping mate-pairs reads with bowtie2
bowtie2 mate-pair aligner written 2.3 years ago by Biomonika (Noolean)2.9k • updated 2.3 years ago by arnstrm1.5k
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1.5k
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Which Aligner Would You Recommend For Transcriptome Assembly
aligner transcriptome assembly written 4.3 years ago by Nicolas Rosewick5.2k • updated 3.3 years ago by mikhail.shugay3.2k
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Different Results Of Tophat And Bowtie2
alignment tophat bowtie2 mapping aligner tophat2 written 3.5 years ago by Mohammad Reza Bakhtiarizadeh250 • updated 3.5 years ago by Neilfws47k
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6 follow
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Which Short Read Mappers Can Handle Overlapping Paired-End Reads?
short aligner paired written 6.5 years ago by Ryan Thompson3.2k • updated 3.8 years ago by Adrian Pelin2.0k
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8
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30 follow
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What Methods Do You Use For In/Del/Snp Calling?
short aligner snp sequencing written 7.4 years ago by Pierre Lindenbaum96k • updated 3.8 years ago by Biostar ♦♦ 20
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Aligning Short Reads To Homologous Sequences?
short aligner transcriptome written 6.2 years ago by Goldbear130 • updated 3.8 years ago by rob234king530
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Shrimp2 On Galaxy Instance
aligner written 4.0 years ago by kanwarjag750 • updated 4.0 years ago by Matt Shirley7.8k
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A Map(?) Of Sequence Alignment
sequence aligner alignment written 4.2 years ago by Karol Pal jr.20 • updated 4.2 years ago by zam.iqbal.genome1.6k
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Shrimp Uniquely Aligned Reads
aligner samtools rna-seq written 4.4 years ago by vj310 • updated 4.4 years ago by Ashutosh Pandey11k
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6
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2.6k
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7 follow
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Need Recommendations For Aligning Longer (2X250Bp) Reads
aligner written 4.9 years ago by Richard500 • updated 4.5 years ago by kanwarjag750
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Mapping 454 Rnaseq To A Genome
aligner rna-seq written 4.6 years ago by Darked894.1k • updated 4.5 years ago by Rohit1.2k
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Aligner That Preserves Case?
aligner bioperl msa written 4.6 years ago by Fwip470 • updated 4.6 years ago by Manu Prestat3.8k
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Mate Pair Alignment Summary
illumina aligner written 5.0 years ago by Richard500 • updated 5.0 years ago by Rm7.5k
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9 follow
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Aligning Reads From Small Rna-Seq Onto Human Genome
next-gen small sequencing short aligner alignment rna written 5.5 years ago by Leszek3.7k • updated 5.5 years ago by Vikas Bansal2.2k
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Ngs: How Many Reads Should Be Expected To Map To The Reference Sequence
short aligner next-gen sequencing written 7.3 years ago by Allpowerde1.2k • updated 5.6 years ago by Darked894.1k
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5 follow
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Why Longer Reads Must Be Trimmed Or Divided Into 36Bp ?
short aligner cnv written 5.6 years ago by Liuyunlong130 • updated 5.6 years ago by Gustavo510
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7 follow
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Bwa Aligner: How To Get Percentage Of Reads Aligned?
short aligner rna written 5.7 years ago by Doo220 • updated 5.7 years ago by Kanne400
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Can Soap2 Be Used For Rna-Seq Analysis
short aligner rna written 5.8 years ago by Wligtenberg10 • updated 5.8 years ago by Malachi Griffith15k
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How Does Bowtie Handle Colorspace Data?
short solid alignment bowtie aligner written 6.1 years ago by Bioinfo320 • updated 5.8 years ago by Istvan Albert ♦♦ 73k
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9 follow
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What Is The Fastest Alignment Tool To Map Reads To A Big Genome Over 4Gb?
short aligner written 5.9 years ago by Dejian1.2k • updated 5.9 years ago by Istvan Albert ♦♦ 73k
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6 follow
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Aligner For Allowing Multiple Matches (#N) For A Read
short aligner written 6.0 years ago by Abhi1.4k • updated 6.0 years ago by Lee Brooks10
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