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<prev • 6,114 results • page 1 of 204 • next >
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NCBI gtf contains same trasncript id for some trasncripts and giving trouble on htseqcount
assembly alignment rna-seq sequencing written 5 minutes ago by patelbhaumikn • 0
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30
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Sort Sam file by chromosome and position in python
genome python alignment sam written 3 hours ago by hectorbaigessanchez • 0
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32
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1
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PSSM files - relationship between HHBlits .MTX file and Blast .PSSM file?
alignment hhblits psi-blast written 1 day ago by harold.powell • 0
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1
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1
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How to get the sequence differences between multiple bacterial genomes
genome alignment written 12 hours ago by Rose • 0 • updated 9 hours ago by shenwei356 ♦ 5.6k
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Impact of RNAseq read length on non-reference genome alignment
alignment rna-seq written 16 hours ago by rependo • 10
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Alternatives for Staden Package?
software error alignment sequencing written 1 day ago by chinghuang101 • 0
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88
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Knock out genes and TPM
gene alignment next-gen rna-seq gene knock outs written 1 day ago by simang5c • 10
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49
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1
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Embedding Metagenomics Tools onto a Website
bacteria metagenomics alignment fungi sequencing written 1 day ago by stelaanag • 0 • updated 1 day ago by Jean-Karim Heriche ♦ 23k
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5 follow
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Changing chromosome names in BAM files
alignment chip-seq rna-seq written 1 day ago by aodabas20 • 0 • updated 1 day ago by swbarnes2 ♦ 9.1k
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Is there a way to map long fasta reads to short reference sequences?
alignment rna-seq bowtie written 2 days ago by Apex92 • 20 • updated 1 day ago by karl.stamm ♦ 3.9k
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blast query using list instead of single .fa files from command line?
alignment sequence written 2 days ago by goatsrunfaster • 20
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76
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How to map longer reads against a local reference using Bowtie
alignment sequence bowtie rna-seq mismatch written 2 days ago by Apex92 • 20
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1
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51
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1
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Prokka error message
software error alignment written 3 days ago by a.mostafa5050 • 0 • updated 2 days ago by Mensur Dlakic • 7.1k
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10 follow
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Forum: DNA in pixels
genome forum alignment sequencing written 6 days ago by mervsen • 30 • updated 4 days ago by cmarmanjuriya • 0
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Haplotyping Using Whatshap
genome sequence alignment snp written 4 days ago by wangyunyang • 0 • updated 4 days ago by h.mon ♦ 31k
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Ancient genome realignment?
assembly alignment snp written 5 days ago by ermela.paparisto • 0 • updated 4 days ago by Ventrilocus • 80
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How to annotate ChIP peaks base on NCBI sequence name?
annotation sequence chip-seq alignment written 5 days ago by iridha • 0
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83
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5 follow
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RNAseq RSEM and featurecounts
alignment rna-seq written 6 days ago by sidwell • 10 • updated 5 days ago by igor ♦ 11k
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mutli-character self defined alphabet for multisequence alignement
alignment written 6 days ago by Elephantdumbo • 20
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HISAT2 compilation error: cannot find various static files
alignment rna-seq written 6 days ago by limsingwei2 • 0
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reference genome for 16S rDNA sequences in NGS analysis
ref next-gen 16s alignment genome written 4.7 years ago by Ybanet • 0 • updated 6 days ago by jazebe_1461 • 0
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49
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Best way to deal with chimeric reads?
short-reads illumina alignment sequencing chimera written 6 days ago by deniselavezzari • 0
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Changing distance matrix to scoring matrix to use in alignment software ? (attempt to aligning monomers)
alignment sequence written 6 days ago by Elephantdumbo • 20
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56
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How to use bowtie2, reporting only the chromosomal coordinate
sequence alignment written 6 days ago by chloe • 0
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46
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Tools to find similarity and identity via terminal or ubuntu
genome alignment bash sequencing linux written 6 days ago by projetoic • 0
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55
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Trying to understand BWA output and what it could mean? Please help!
alignment written 7 days ago by screadore • 0 • updated 7 days ago by JC ♦ 12k
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2
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Align pacbio subreads against assembled pacbio reads
alignment written 7 days ago by wes • 20 • updated 7 days ago by Istvan Albert ♦♦ 85k
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2
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5 follow
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Sequence Retrieval of SARS-CoV Complete Genomes
genome alignment sarscov written 7 days ago by peifei0418 • 0
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1
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70
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1
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salmon command not found from shell
alignment rna-seq written 7 days ago by martijnhoes5 • 0 • updated 7 days ago by WouterDeCoster ♦ 44k
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bwa aln writing speed became very slow after being very fast. What is the pattern of output size?
alignment next-gen bwa written 14 days ago by Jerry • 0 • updated 7 days ago by d-cameron • 2.3k
<prev • 6,114 results • page 2 of 204 • next >
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