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<prev • 5,222 results • page 1 of 175 • next >
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Replacing reference with aligned reads
correction alignment written 9 months ago by elena.syp • 0 • updated 52 minutes ago by Biostar ♦♦ 20
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How to find the insertion site of GFP in viral genome using RNA-Seq?
alignment virus chimeric rna-seq gfp written 1 hour ago by Prisca :) • 0
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45
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coverage per gene in mapped reads to genome
genome gene alignment snp written 5 hours ago by Mehmet • 500
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64
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alignment of multiple multifasta files- MAFFT command line
alignment sequence mafft written 23 hours ago by Wilber0x • 10 • updated 23 hours ago by h.mon ♦ 28k
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90
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6 follow
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Running blastX locally
sequencing clustalx alignment local database written 1 day ago by marongiu.luigi • 420 • updated 1 day ago by Asaf ♦ 6.5k
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6 follow
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Cellranger count fails at mapping
alignment rna-seq written 2 days ago by c.blume • 20
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Why does BWA sometimes omit X0 and X1 tags?
burrows-wheeler aligner alignment dna-seq bwa written 1 day ago by b10hazard • 30 • updated 1 day ago by h.mon ♦ 28k
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102
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1
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Local alignment of different lengths in Biopython
alignment written 2 days ago by ognjen011 • 190
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51
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1
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Discrepancy in number of BLAST hits
ncbi alignment blast written 1 day ago by georgeyates1994 • 0 • updated 1 day ago by lakhujanivijay ♦ 4.6k
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Is BWT algorithm suitable for all types of alignment task?
alignment written 1 day ago by wuqingkuangsha • 20 • updated 1 day ago by mark.ziemann • 1.2k
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Minimap2 giving 2 TB sam file as an output
minimap2 sequence alignment written 2 days ago by Inquisitive8995 • 130 • updated 2 days ago by h.mon ♦ 28k
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48
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Output number of SNPs are chaging from run to run
genome alignment next-gen snp written 2 days ago by Bioin • 10
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31
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phagorn:phydat no species name returned
phylogeny phagorn alignment written 2 days ago by ieie • 0
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46
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MUMmer . Global alignment
mummer alignment sequencing written 2 days ago by mejait99 • 0 • updated 2 days ago by lieven.sterck ♦ 6.3k
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567
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6 follow
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Best practices for counting genes with nanopore RNAseq data
alignment rna-seq nanopore written 9 months ago by Florian Bernard • 60 • updated 2 days ago by v.shapovalova1 • 0
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How to do the data imputation of my protein expression data(values)
gene R next-gen rna-seq alignment written 2 days ago by koushikayaluri • 20
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1
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78
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1
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Differentially Expressed Genes Heatmap
R alignment rna-seq sequencing written 3 days ago by sambunga094 • 0
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90
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Getting scientific name (ssciname) in Blastn output
alignment blast written 5 days ago by brianna.flynn • 10 • updated 3 days ago by Amar • 480
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97
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Bowtie2 error RNA seq aligning to genome
assembly alignment rna-seq written 5 days ago by nidhi.vijayan13 • 10 • updated 5 days ago by genomax ♦ 74k
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HIV source bam or cram file for download?
sequence alignment written 3.5 years ago by cristina_sabiers • 70 • updated 5 days ago by Biostar ♦♦ 20
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Is read trimming needed for WGBS (bisulfite) data?
bisufite trimming alignment wgbs written 12 days ago by Chris Miller ♦ 21k • updated 5 days ago by Devon Ryan ♦ 92k
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Mauve program will not open
gene assembly alignment written 5 days ago by hoffmavl1 • 10
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208
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6 follow
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Needleman-Wunsch with Python
gap python alignment blosum62 gap penalty written 22 days ago by salvatoredanilopalumbo • 0 • updated 5 days ago by salihakevserkavuncu • 0
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62
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Quntify Antibiotic resistance gene abundence
alignment rna-seq written 6 days ago by raju.koorakula • 0 • updated 6 days ago by Pierre Lindenbaum ♦ 124k
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2
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79
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SAM flags needed for paired-end strand-specific differential expression
alignment samtools sam rna-seq written 6 days ago by Etstevens • 0 • updated 6 days ago by kristoffer.vittingseerup • 2.6k
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HMMER installed with conda: no tutorial folder
genome installation alignment hmmer written 7 days ago by Wilber0x • 10 • updated 6 days ago by konkelzach • 10
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131
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is there a web-based tool to cross-species compare multiple nucleotide or protein sequences for identity and homology in batches
alignment homology written 6 days ago by CrazyB • 210 • updated 6 days ago by jared.andrews07 • 4.0k
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305
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1
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STAR output soft-clipped reads instead of insertion
alignment written 7 months ago by jasonwufree2012 • 20
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533
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1
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how to make query list and reference list of genome in fastANI tool
genome software error next-gen alignment assembly written 18 months ago by biotechpedia • 0 • updated 7 days ago by Nay Catina Dia • 0
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region amplified by primers designed for bisulfite
gene alignment sequencing written 7 days ago by rezaee.genetic • 0 • updated 7 days ago by Pierre Lindenbaum ♦ 124k
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