Showing: alignmentreset
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105
votes
8
answers
39k
views
50 follow
8
answers
Workflow Or Tutorial For Snp Calling?
alignment next-gen samtools snp sequencing written 7.9 years ago by Matthieu430 • updated 3.1 years ago by alexisdereeper30
92
votes
15
answers
31k
views
26 follow
15
answers
What Is The Quickest Algorithm For Range Overlap?
python database next-gen alignment sequencing written 8.7 years ago by User 1586270 • updated 10 months ago by endrebak740
35
votes
3
answers
1.6k
views
21 follow
3
answers
72
votes
5
answers
12k
views
22 follow
5
answers
Tutorial: For Short Reads, Which Aligners Find All Hits Given Certain Edit Distance Threshold?
ngs alignment tutorial bwa written 6.2 years ago by lh331k • updated 6.1 years ago by pan.alexiou10
40
votes
1
answer
6.7k
views
1
answer
Burrow-Wheeler Alignment
alignment bwa bowtie written 7.7 years ago by Bioscientist1.6k • updated 2.5 years ago by Biostar ♦♦ 20
44
votes
6
answers
2.3k
views
6 follow
6
answers
55
votes
6
answers
37k
views
29 follow
6
answers
Estimate Insert Size In Paired-End/Mate-Pair
next-gen paired alignment sequencing written 7.2 years ago by Ric140 • updated 7.2 years ago by Ketil3.9k
75
votes
5
answers
24k
views
27 follow
5
answers
Star Or Tophat?
rnaseq tophat alignment written 5.3 years ago by lkmklsmn870 • updated 5.0 years ago by super60
13
votes
2
answers
7.1k
views
5 follow
2
answers
21
votes
3
answers
5.6k
views
6 follow
3
answers
27
votes
1
answer
4.5k
views
14 follow
1
answer
Grch38 And Reference Alignment
alignment human written 5.2 years ago by aniketd86150 • updated 5.2 years ago by deanna.church1.1k
21
votes
4
answers
3.2k
views
10 follow
4
answers
18
votes
1
answer
498
views
16 follow
1
answer
Forum: Review of the CIGAR string format
forum alignment written 5 months ago by Juke-342.1k
27
votes
2
answers
4.4k
views
2
answers
Programming Challange: Pairwise Alignments To Multiple Alignment
perl indel alignment scripting programming written 8.5 years ago by Rm7.8k • updated 8.5 years ago by Haibao Tang3.0k
32
votes
3
answers
7.3k
views
15 follow
3
answers
Which Aligners Recognize Soft-Masked Repeats In Reference Sequences?
alignment written 8.5 years ago by Jeremy Leipzig18k • updated 6.0 years ago by Ali R. Vahdati190
18
votes
2
answers
7.8k
views
12 follow
2
answers
8
votes
1
answer
4.7k
views
1
answer
Best Bwa Parameters For Mirna Alignment
alignment bwa mirna written 8.4 years ago by Doctoroots760 • updated 8.3 years ago by Michael Dondrup46k
27
votes
4
answers
2.1k
views
4
answers
Aligning Two Proteins With Their Domains/Annotations
annotation alignment protein written 8.4 years ago by Pierre Lindenbaum118k • updated 8.1 years ago by Michael Schubert6.9k
5
votes
2
answers
3.4k
views
5 follow
2
answers
Principal Component Analysis On A Multiple Alignment
alignment multiple statistics written 8.3 years ago by Jamand110 • updated 8.3 years ago by User 0063210
15
votes
3
answers
2.0k
views
7 follow
3
answers
Classify Or Align ?
classification metagenomics alignment hmm blast written 7.3 years ago by Manu Prestat3.9k • updated 3 months ago by lagartija60
68
votes
5
answers
8.6k
views
16 follow
5
answers
What Should I Use Blat For?
alignment written 6.4 years ago by KCC3.9k • updated 6.4 years ago by David Quigley11k
16
votes
2
answers
4.8k
views
13 follow
2
answers
13
votes
1
answer
2.5k
views
7 follow
1
answer
Mapq Scores Inside Repeats
alignment written 5.1 years ago by 141341254653464453.4k
37
votes
5
answers
24k
views
23 follow
5
answers
How to extract unique mapped results from Bowtie2 bam results?
alignment written 4.9 years ago by zhwjmch70 • updated 2.9 years ago by merodev140
55
votes
1
answer
1.1k
views
16 follow
1
answer
37
votes
8
answers
3.7k
views
13 follow
8
answers
38
votes
6
answers
7.8k
views
14 follow
6
answers
Multiple Sequence Alignment For Cdnas
alignment cdna clustalw multiple written 8.6 years ago by Haibao Tang3.0k • updated 3.0 years ago by kissaj90
31
votes
6
answers
2.6k
views
7 follow
6
answers
Determining Which New Snps In 1000G Data Result In Coding Changes
genome linkage alignment protein prediction written 8.5 years ago by Ryan D3.3k • updated 3 months ago by Biostar ♦♦ 20
8
votes
1
answer
13k
views
5 follow
1
answer
Short And Long Read Sequencing
short next-gen alignment sequencing written 8.2 years ago by Higherdefender110 • updated 8.1 years ago by Istvan Albert ♦♦ 80k
33
votes
5
answers
5.8k
views
13 follow
5
answers
Should I Strip Alignment Columns Before Making A Tree?
phylogenetics alignment tree written 8.1 years ago by John750 • updated 5.7 years ago by Biostar ♦♦ 20
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