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<prev • 5,779 results • page 1 of 193 • next >
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BBMap Statistics Evaluation
gene assembly alignment sequencing written 11 minutes ago by Ada • 0
2
votes
1
answer
52
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1
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genome assembly vs genome annotation
genome alignment rna-seq written 20 hours ago by Zeinab.mokhtar • 0 • updated 20 hours ago by lieven.sterck ♦ 8.0k
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48
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Distribution of multi mapped reads
alignment samtools rna-seq bam written 23 hours ago by biogrin • 0
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28
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0
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Better way for speedup of Humann3 metagenomics analysis pipeline?
humann metagenomics alignment pipeline written 1 day ago by boaty • 110
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1
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65
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1
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Checking whether the reads aligned to specific gene have the specific exon in BAM file
alignment samtools rna-seq sequencing written 1 day ago by dh.han • 0 • updated 1 day ago by geek_y ♦ 11k
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44
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Using magicblast for short sequences
genome alignment magicblast rna-seq blast written 3 days ago by goonerrn • 0 • updated 3 days ago by genomax ♦ 85k
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37
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0
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Samtools flagstat with sncRNA (single-end reads)
sequence alignment rna-seq written 4 days ago by morteza.aslanzadeh • 10
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1
answer
59
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1
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Effects of applying BQSR twice?
qualityscores bqsr alignment sequencing written 5 days ago by Chris Miller ♦ 21k • updated 5 days ago by h.mon ♦ 30k
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1
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59
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1
answer
Mapping reads to combined mouse and human genome
alignment star rna-seq written 5 days ago by biostarukha • 10 • updated 5 days ago by genomax ♦ 85k
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1
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67
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1
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How to find mapped regions in the reference genome
genome alignment longreads bwa sequencing written 6 days ago by Ashi • 0
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57
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0
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Difference between workflow and module in Nextflow?
alignment written 6 days ago by eternalshadowrose • 0
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0
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85
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0
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targeted DNA sequencing
next-gen alignment dna-seq targeted sequencing written 6 days ago by Pettorato • 0
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1
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44
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1
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Filtering repetitive element during mapping
alignment mapping rna-seq written 7 days ago by dahun73 • 10 • updated 7 days ago by JC ♦ 10k
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36
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0
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How to confirm NTC template contamination in WGS data?
genome next-gen alignment sequencing written 7 days ago by esha.joshi • 0
1
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0
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63
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0
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Aligning two genomes
genome alignment written 7 days ago by Nicolas Carter • 10
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1
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62
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1
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Differences between "gene prediction" vs. "transcript reconstruction"
assembly gene prediction alignment rna-seq written 7 days ago by ljason2020 • 0 • updated 7 days ago by lieven.sterck ♦ 8.0k
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1
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68
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1
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Downsample BAM file according to coverage
assembly alignment samtools written 9 days ago by nalesh_jadhav • 10 • updated 9 days ago by ATpoint ♦ 36k
1
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1
answer
73
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1
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Detection nucleotide changes in VCF file
linux next-gen alignment mutation vcl written 10 days ago by stan.aanhane • 30 • updated 10 days ago by Pierre Lindenbaum ♦ 129k
1
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1
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100
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1
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Developing script that loops through multiple reference genomes...
genome gene alignment written 11 days ago by Ada • 0
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0
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64
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0
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Assemblers and tools for MetaGenome and Metatranscriptomcs analysis
assembly next-gen alignment written 11 days ago by glady • 260
1
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1
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61
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1
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Syntax for samtools flagstat on multiple .bam files outputting to .txt file
alignment written 12 days ago by Ada • 0 • updated 12 days ago by khorms • 110
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75
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minimap2: aligning ambigious sequence containing N to fastq reads.
gene alignment next-gen sequencing written 12 days ago by vnyksm • 10 • updated 12 days ago by genomax ♦ 85k
1
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77
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Different mapping results between HISAT and TopHat
alignment rna-seq written 12 days ago by concetta • 0
1
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1
answer
66
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1
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De novo alignement with smrttools
alignment smrttools denovo written 12 days ago by vincentpailler • 140
3
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1
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74
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1
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Convert .sam to .bam without producing writing .sam file to storage space
alignment written 12 days ago by Ada • 0
0
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0
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65
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0
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Conservation between sequences with a specific window size
sequence python alignment written 12 days ago by ms_highvoltage • 0
7
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1
answer
121
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1
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Help with my differential expression analysis (homework)
fastq alignment bioconductor rna-seq written 13 days ago by gatoxos • 0 • updated 12 days ago by h.mon ♦ 30k
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70
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0
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High percentage of discordant reads
alignment written 13 days ago by Domu • 0 • updated 13 days ago by Pierre Lindenbaum ♦ 129k
1
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0
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73
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0
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Visualizing pacbio-derived alignment in IGV
alignment igv pbi bam written 13 days ago by cugopal • 0
10
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2
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103
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8 follow
2
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How to extract genome from iontorent bam file?
genome assembly alignment written 14 days ago by Shaminur • 40
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