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<prev • 6,045 results • page 1 of 202 • next >
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how to convert FASTQ to complementary sequences
fastq alignment rna-seq written 1 hour ago by dahun73 • 10
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26
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freebayes running error on public data
variant calling alignment freebayes bam file written 9 hours ago by anithanagaraj93 • 0
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33
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Convert COSMIC VCF coordinates to that of ensembl format?
alignment next-gen snp sequencing written 17 hours ago by simplitia • 40
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48
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1
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How to have the count of reads mapping each transcript of a fasta file ?
alignment rna-seq written 17 hours ago by agtbeeman • 0 • updated 16 hours ago by h.mon ♦ 31k
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1
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37
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1
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Possibility of mapping opposite strand
fastq alignment star rna-seq written 1 day ago by dahun73 • 10 • updated 1 day ago by swbarnes2 ♦ 8.9k
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79
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Tool: Trimviz, a lightweight QC tool to assess impact of read-trimming and aligner soft-clipping
trimming tool fastq clipping alignment qc written 1 day ago by stuart archer • 50
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58
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Indel realignment: GATK vs. BCFtools
sequence alignment snp written 3 days ago by martytriggers • 0 • updated 3 days ago by genomax ♦ 91k
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65
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BWA alignment generating errors
alignment bwa written 3 days ago by MAPK • 1.6k
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1
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72
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1
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Online alignment for large fasta files
genome alignment sequence fasta written 3 days ago by mkh • 40 • updated 3 days ago by hugo.avila • 160
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108
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Job: any remote internship or bioinformatics job offer?
genome job R alignment rna-seq bioinformatics written 3 days ago by Raia262 • 0
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61
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BWA mem minimum read length
short dna alignment bwa mem written 4 days ago by yolek64754 • 10
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59
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Distance matrix based on the whole input alignment
python alignment biopython written 5 days ago by anasjamshed1994 • 20 • updated 5 days ago by ATpoint ♦ 40k
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53
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1
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How do I extract sequences to create a fasta file from an nhmmer .out file?
fasta nhmmer alignment hmm hmmer written 5 days ago by carlee.bettler • 10 • updated 5 days ago by Fatima • 750
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125
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Freebayes 'bamleftalign' function usage issues (Part of the 'Du Novo' Sequencing pipeline)
du novo alignment freebayes written 6 days ago by jmath97 • 0
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91
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how to identify where multi-mappers, or "non primary hits" are mapping to
alignment next-gen rna-seq written 6 days ago by bertb • 10
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1
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68
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1
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CUT&RUN analysis pipeline
alignment sequencing written 6 days ago by pixie@bioinfo • 1.4k • updated 6 days ago by rpolicastro • 2.0k
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33
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How to estimate the running time when using CIPRES ?
alignment next-gen sequence written 7 days ago by yaqinguo629 • 0
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53
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BAM Merger Two Separate References?
assembly alignment written 7 days ago by glew • 0
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49
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Re-evaluating SAM/BAM bitflags after modifying the file
alignment written 7 days ago by elsoja • 120
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81
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many read aligned to the same position but with different variants
reads duplicates alignment written 7 days ago by yliueagle • 220 • updated 7 days ago by genomax ♦ 91k
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90
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Could any one explain about the pairwise alignment matrix.
gene alignment sequence written 7 days ago by saikishoremudhiraj2311 • 0 • updated 7 days ago by h.mon ♦ 31k
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56
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Detection of Novel splice events
alignment rna-seq written 7 days ago by Nelislam4 • 20
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63
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STAR aligner - multimaps vs. strandedness
ribosome profiling alignment star rna-seq riboseq written 8 days ago by cjag • 0
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43
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sortmerna error ref file
indexing sortmerna alignment written 9 days ago by charles.decraene.unistra • 0
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71
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How to get the number of segregating sites from a multiple alignment?
sequence alignment sequencing written 10 days ago by Flávia Rogério • 0 • updated 10 days ago by RamRS ♦ 30k
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1
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95
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1
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bowtie2 using loop on bash with paired-ended reads
bowtie2 sequence alignment bash written 11 days ago by v.berriosfarias • 0 • updated 11 days ago by swbarnes2 ♦ 8.9k
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83
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Need Help designing a workflow
arg resistomes alignment sequencing written 11 days ago by ZBL • 0
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82
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blast+ v2.10.1. error Error: mdb_env_open: Cannot allocate memory
software error alignment sequencing written 12 days ago by MEITUO • 10 • updated 12 days ago by genomax ♦ 91k
2
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66
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1
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How to calculate number of fragment and its coverage from BAM file?
genome bedtools alignment rna-seq written 12 days ago by star • 260
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99
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[Prokaryote] How to go from reads to counts given that there is no exon column in gtf file?
alignment rna-seq written 14 days ago by akibio • 0 • updated 14 days ago by Juke34 • 4.8k
<prev • 6,045 results • page 1 of 202 • next >
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