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genome assembly vs genome annotation
genome alignment rna-seq written 20 hours ago by Zeinab.mokhtar0 • updated 20 hours ago by lieven.sterck8.0k
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Using magicblast for short sequences
genome alignment magicblast rna-seq blast written 3 days ago by goonerrn0 • updated 3 days ago by genomax85k
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Effects of applying BQSR twice?
qualityscores bqsr alignment sequencing written 5 days ago by Chris Miller21k • updated 5 days ago by h.mon30k
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Mapping reads to combined mouse and human genome
alignment star rna-seq written 5 days ago by biostarukha10 • updated 5 days ago by genomax85k
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Filtering repetitive element during mapping
alignment mapping rna-seq written 7 days ago by dahun7310 • updated 7 days ago by JC10k
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Downsample BAM file according to coverage
assembly alignment samtools written 9 days ago by nalesh_jadhav10 • updated 9 days ago by ATpoint36k
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Detection nucleotide changes in VCF file
linux next-gen alignment mutation vcl written 10 days ago by stan.aanhane30 • updated 10 days ago by Pierre Lindenbaum129k
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Syntax for samtools flagstat on multiple .bam files outputting to .txt file
alignment written 12 days ago by Ada0 • updated 12 days ago by khorms110
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Help with my differential expression analysis (homework)
fastq alignment bioconductor rna-seq written 13 days ago by gatoxos0 • updated 12 days ago by h.mon30k
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High percentage of discordant reads
alignment written 13 days ago by Domu0 • updated 13 days ago by Pierre Lindenbaum129k
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