Showing: alignmentreset
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105
votes
8
answers
39k
views
50 follow
8
answers
Workflow Or Tutorial For Snp Calling?
alignment next-gen samtools snp sequencing written 7.9 years ago by Matthieu430 • updated 3.1 years ago by alexisdereeper30
55
votes
6
answers
37k
views
29 follow
6
answers
Estimate Insert Size In Paired-End/Mate-Pair
next-gen paired alignment sequencing written 7.2 years ago by Ric140 • updated 7.2 years ago by Ketil3.9k
75
votes
5
answers
24k
views
27 follow
5
answers
Star Or Tophat?
rnaseq tophat alignment written 5.3 years ago by lkmklsmn870 • updated 5.0 years ago by super60
92
votes
15
answers
31k
views
26 follow
15
answers
What Is The Quickest Algorithm For Range Overlap?
python database next-gen alignment sequencing written 8.7 years ago by User 1586270 • updated 10 months ago by endrebak740
37
votes
5
answers
24k
views
23 follow
5
answers
How to extract unique mapped results from Bowtie2 bam results?
alignment written 4.9 years ago by zhwjmch70 • updated 2.9 years ago by merodev140
72
votes
5
answers
12k
views
22 follow
5
answers
Tutorial: For Short Reads, Which Aligners Find All Hits Given Certain Edit Distance Threshold?
ngs alignment tutorial bwa written 6.2 years ago by lh331k • updated 6.1 years ago by pan.alexiou10
35
votes
3
answers
1.6k
views
21 follow
3
answers
34
votes
1
answer
11k
views
18 follow
1
answer
bash loop for alignment RNA-seq data
next-gen alignment rna-seq written 5.0 years ago by Paul1.3k • updated 17 months ago by parmarsachinsingh0
68
votes
5
answers
8.6k
views
16 follow
5
answers
What Should I Use Blat For?
alignment written 6.4 years ago by KCC3.9k • updated 6.4 years ago by David Quigley11k
36
votes
7
answers
1.3k
views
16 follow
7
answers
18
votes
1
answer
498
views
16 follow
1
answer
Forum: Review of the CIGAR string format
forum alignment written 5 months ago by Juke-342.1k
55
votes
1
answer
1.1k
views
16 follow
1
answer
32
votes
3
answers
7.3k
views
15 follow
3
answers
Which Aligners Recognize Soft-Masked Repeats In Reference Sequences?
alignment written 8.5 years ago by Jeremy Leipzig18k • updated 6.0 years ago by Ali R. Vahdati190
14
votes
2
answers
2.9k
views
15 follow
2
answers
Best tool for variant calling
genome alignment next-gen snp written 11 months ago by williamsbrian5064160 • updated 5 months ago by claire0
38
votes
6
answers
7.8k
views
14 follow
6
answers
Multiple Sequence Alignment For Cdnas
alignment cdna clustalw multiple written 8.6 years ago by Haibao Tang3.0k • updated 3.0 years ago by kissaj90
15
votes
6
answers
6.0k
views
14 follow
6
answers
27
votes
1
answer
4.5k
views
14 follow
1
answer
Grch38 And Reference Alignment
alignment human written 5.2 years ago by aniketd86150 • updated 5.2 years ago by deanna.church1.1k
37
votes
8
answers
3.7k
views
13 follow
8
answers
33
votes
5
answers
5.8k
views
13 follow
5
answers
Should I Strip Alignment Columns Before Making A Tree?
phylogenetics alignment tree written 8.1 years ago by John750 • updated 5.7 years ago by Biostar ♦♦ 20
16
votes
2
answers
4.8k
views
13 follow
2
answers
10
votes
5
answers
10k
views
13 follow
5
answers
Finding a sequence in a fasta file
sequence alignment written 4.9 years ago by mbk0asis410 • updated 4.9 years ago by PoGibas4.8k
37
votes
6
answers
6.6k
views
12 follow
6
answers
Best Spliced Aligner To Human Genome With Limited Rna-Seq Reads
splicing alignment rna written 8.8 years ago by Wjeck480 • updated 8.5 years ago by Zee40
32
votes
3
answers
8.3k
views
12 follow
3
answers
18
votes
2
answers
7.8k
views
12 follow
2
answers
38
votes
2
answers
5.1k
views
12 follow
2
answers
38
votes
6
answers
11k
views
11 follow
6
answers
Pairwise Genome Alignment
pairwise genome alignment written 8.4 years ago by Andrea_Bio2.5k • updated 7.6 years ago by Larry_Parnell16k
22
votes
5
answers
9.1k
views
11 follow
5
answers
Bam : Extract Only Alignment With A Specific Length
alignment extraction length rna bam written 7.6 years ago by Nicolas Rosewick7.5k • updated 7.6 years ago by Marvin840
13
votes
5
answers
3.0k
views
11 follow
5
answers
An Alternative To Blastx With Speed Similar To Bowtie
nucleotide alignment protein blast bowtie written 7.2 years ago by Tianyang Li490 • updated 6 months ago by h.mon24k
18
votes
10
answers
3.8k
views
11 follow
10
answers
Manual Msa Editor
alignment multiple written 7.1 years ago by Arjen Ten Have340 • updated 2.9 years ago by Suzanne50
20
votes
5
answers
5.3k
views
11 follow
5
answers
Aligning One Protein Sequence With A Multiple Sequence Alignment
sequence alignment multiple msa written 6.9 years ago by Reyhaneh480 • updated 20 months ago by kamr1002000
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