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3
votes
2
answers
2.6k
views
2
answers
Parallelize Alignments Using Clustalw-Mpi
alignment clustalw multiple written 9.0 years ago by David M550 • updated 7 months ago by Biostar ♦♦ 20
13
votes
1
answer
14k
views
10 follow
1
answer
Pairwise Sequence Alignment With R
R alignment written 8.9 years ago by Lakshmi50 • updated 7 months ago by gjhansi1110
1
vote
1
answer
1.7k
views
1
answer
Bowtie Accuracy
read next-gen bowtie alignment written 8.3 years ago by Arpssss40 • updated 6 months ago by Biostar ♦♦ 20
2
votes
1
answer
2.8k
views
1
answer
Clustalw Ignoring Custom Weight Matrix
matrix clustalw alignment written 8.1 years ago by interfect0 • updated 6 weeks ago by Biostar ♦♦ 20
7
votes
1
answer
3.2k
views
1
answer
Alignment Software To Only Find Number Of Short Read Alignments?
short read alignment written 7.8 years ago by Click downvote690 • updated 11 months ago by Biostar ♦♦ 20
5
votes
1
answer
1.6k
views
1
answer
What Ever Happened To Alignment Servers?
alignment blat written 7.3 years ago by Jeremy Leipzig19k • updated 4 weeks ago by Biostar ♦♦ 20
5
votes
4
answers
4.7k
views
5 follow
4
answers
Blast Contigs To A Reference Sequence And Obtain An E-Value
assembly alignment blast written 7.2 years ago by ant0422ant0 • updated 7 months ago by Biostar ♦♦ 20
6
votes
2
answers
4.3k
views
6 follow
2
answers
Sequence alignment help: BWA is not my friend!
next-gen alignment written 6.5 years ago by ab.tsubaki50 • updated 7 weeks ago by Biostar ♦♦ 20
10
votes
3
answers
16k
views
10 follow
3
answers
can picard use multiple threads?
alignment written 6.4 years ago by naruto1nrt30 • updated 12 weeks ago by Benedek Dank√≥10
2
votes
1
answer
2.2k
views
1
answer
Translating Nucleotide MSA to Amino Acid MSA
alignment sequence msa written 6.4 years ago by weslfield90 • updated 7 months ago by mrinsmrids0
1
vote
2
answers
1.3k
views
2
answers
Gene Function through sequence homology
gene alignment blast written 6.2 years ago by siddharth.avadhanam30 • updated 11 months ago by skjobs012370
18
votes
2
answers
27k
views
2
answers
what is the difference between GRCh37 and hg19 ?
genome assembly alignment rna-seq written 6.0 years ago by jack830 • updated 11 months ago by Kevin Blighe67k
0
votes
2
answers
2.6k
views
2
answers
stand alone psi-blast
software error alignment sequence blast written 5.9 years ago by crystalrose40 • updated 3 months ago by Biostar ♦♦ 20
12
votes
5
answers
4.6k
views
7 follow
5
answers
Extract reads with variant at given position
alignment sequencing written 5.8 years ago by philip.jonsson30 • updated 3 months ago by Biostar ♦♦ 20
0
votes
0
answers
1.3k
views
0
answers
RaptorX Alignment Method
alignment secondary algorithm raptorx structure written 5.8 years ago by virpatel320 • updated 7 months ago by Biostar ♦♦ 20
7
votes
3
answers
5.3k
views
3
answers
How to filter unique reads from sam file?
bowtie2 next-gen alignment sequencing written 5.7 years ago by Medhat8.8k • updated 3 months ago by Biostar ♦♦ 20
1
vote
2
answers
2.0k
views
2
answers
0
votes
1
answer
1.7k
views
1
answer
gsnap error (Unable to retrieve request for thread)
alignment rna-seq snp written 5.7 years ago by Mohammad Reza Bakhtiarizadeh290 • updated 9 months ago by emccoy500
0
votes
0
answers
1.6k
views
0
answers
2
votes
1
answer
1.8k
views
1
answer
python posterior probability in stockholm file
python alignment biopython msa probability written 5.6 years ago by MAK10 • updated 11 months ago by Biostar ♦♦ 20
0
votes
0
answers
1.5k
views
0
answers
14
votes
1
answer
13k
views
1
answer
Error while running BWA mem
assembly next-gen alignment sequencing written 5.4 years ago by ravi.uhdnis180 • updated 5 months ago by elbakri.fatimazahrae0
2
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3
answers
3.7k
views
3
answers
3
votes
2
answers
4.5k
views
2
answers
How to align DNA reads against a database of protein references
alignment bowtie bwa written 5.4 years ago by bioinfo790 • updated 5 months ago by Biostar ♦♦ 20
0
votes
1
answer
1.4k
views
1
answer
mapping quality for sanger reads
alignment written 5.3 years ago by shinken123100 • updated 7 months ago by Biostar ♦♦ 20
0
votes
1
answer
6.2k
views
1
answer
Phasing using SHAPEIT
assembly sequence snp alignment sequencing written 5.2 years ago by genetic40 • updated 5 months ago by Kevin Blighe67k
7
votes
3
answers
3.2k
views
3
answers
1
vote
1
answer
1.2k
views
1
answer
running an application chromosome by chromosome
genome alignment sequence snp written 4.9 years ago by Bogdan1.1k • updated 9 months ago by Biostar ♦♦ 20
0
votes
0
answers
1.8k
views
0
answers
Help with Mugsy
alignment conservation score mugsy written 4.9 years ago by teresa.noviello890 • updated 5 months ago by Biostar ♦♦ 20
5
votes
2
answers
6.0k
views
2
answers
dxy (Nei 1987) calculation
alignment next-gen sequence snp written 4.9 years ago by modernsynthesis30 • updated 9 months ago by beausoleilmo330
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