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0
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answer
17
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1
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A tool or algorithm to unify (combine) two sequences based on their global alignment?
alignment written 1 hour ago by ehsansepahi • 0
5
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2
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2.3k
views
2
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Running BLAST on huge files
alignment blast written 6.1 years ago by User000 • 420 • updated 3 hours ago by Biostar ♦♦ 20
2
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1
answer
75
views
1
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Bowtie2 command does not produce output file
genome assembly alignment chip-seq rna-seq written 11 hours ago by a.hayat20 • 0 • updated 4 hours ago by seidel ♦ 7.2k
0
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0
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43
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0
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RNA-seq pipeline for degraded RNA
alignment pipeline rna-seq degraded written 15 hours ago by ogola89 • 10
0
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0
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38
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0
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Should I use the same reference file for alignment and variant calling?
software error genome alignment written 16 hours ago by qhtjrmin • 0
1
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1
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37
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1
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Read counts for peak file
alignment rna-seq written 17 hours ago by Romylland • 0 • updated 16 hours ago by ATpoint ♦ 44k
0
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0
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133
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0
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Blastn extension parameters and sequence results to act like mismatch specification?
sequence alignment blast written 6 weeks ago by djgbjj91 • 0 • updated 20 hours ago by lieven.sterck ♦ 9.5k
3
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2
answers
69
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2
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remove mitochondrial reads using Bowtie2
alignment written 2 days ago by pt.taklifi • 60 • updated 1 day ago by Antonio R. Franco • 4.5k
0
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0
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76
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0
answers
How to covert fasta file into pandas dataframe with parallel running python script?
alignment written 2 days ago by sunyeping • 30
0
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0
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50
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0
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Tool: GMAP gff wrong direction of transcripts?
assembly alignment tool rna-seq written 2 days ago by maria • 0
0
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1
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69
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1
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How to add the amount of conservation (*);(:);(.) to an established multiple sequences alignment?
conservation alignment msa written 3 days ago by cornflower.9aceeb • 0 • updated 2 days ago by Mensur Dlakic • 8.4k
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0
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62
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0
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How to use samtools faidx
gene alignment written 2 days ago by florian.grosmaire • 0
1
vote
2
answers
146
views
2
answers
Problem with MAFFT Multiple Sequence Alignment
genome alignment msa error mafft written 5 weeks ago by peifei0418 • 0 • updated 2 days ago by wook • 0
1
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0
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132
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0
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How to confirm if VCF file is normalized and Left aligned ?
vcf normalization alignment bcftools ukbb written 3 days ago by vaibhash • 0
3
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1
answer
59
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1
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Message Error : Blastdbcmd
gene sequence alignment written 4 days ago by florian.grosmaire • 0 • updated 4 days ago by GenoMax ♦ 95k
0
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0
answers
59
views
0
answers
Error in Blast+
alignment sequence written 4 days ago by a.mostafa5050 • 0
3
votes
1
answer
523
views
6 follow
1
answer
Too many unmapped reads - STAR alignment
alignment written 8 months ago by codsorre • 10 • updated 5 days ago by jdmontenegroc • 0
1
vote
1
answer
69
views
1
answer
Module trait association in wgcna
assembly alignment rna-seq R written 5 days ago by guliasitu40 • 80 • updated 5 days ago by Kevin Blighe ♦ 69k
6
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1
answer
80
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5 follow
1
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How to Run IGV on Linux Remote Machine
alignment rna-seq sequencing written 5 days ago by Aynur • 40 • updated 5 days ago by i.sudbery ♦ 10k
0
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1
answer
2.1k
views
1
answer
Running splign just like NCBI
gnomon alignment splign written 5.8 years ago by Reece • 310
7
votes
2
answers
144
views
2
answers
Unexpected gene polymorphism using Salmon-tximeta-DESeq2
alignment rna-seq written 13 days ago by raywong.chn • 10
2
votes
2
answers
67
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2
answers
How can I visualize the Pileup to determine if there is a 5 BP deletion?
genome sequence alignment sequencing written 6 days ago by screadore • 0 • updated 6 days ago by Kevin Blighe ♦ 69k
2
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1
answer
133
views
1
answer
What is the difference between Average Nucleotide Identity (ANI) and blastn analysis?
sequence bioinformatics alignment blast written 7 days ago by Kumar • 40
0
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1
answer
46
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1
answer
IGV pop up file interpretation
alignment written 7 days ago by wes • 40 • updated 7 days ago by Pierre Lindenbaum ♦ 133k
2
votes
1
answer
85
views
1
answer
Blast + Alignement Shell Script
blast tutorial alignment script shell written 7 days ago by florian.grosmaire • 0 • updated 7 days ago by brian.fristensky • 140
0
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0
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54
views
0
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Human contamination in Chimpanzee or Bonobo data
next-gen alignment contamination sequencing written 7 days ago by rah • 20
0
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0
answers
66
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0
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how to interpret htseq output
gene assembly alignment rna-seq sequencing written 8 days ago by javad.sadeghi1 • 0 • updated 8 days ago by rpolicastro ♦ 3.3k
0
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0
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51
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0
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Pairwise2 Gap penalty function for insertion errors
python alignment biopython sequencing written 8 days ago by trinityduke100 • 10
11
votes
1
answer
131
views
1
answer
K-mer sequencing vs sequence-alignment
k-mer next-gen tutorial alignment short-reads written 8 days ago by GoldenRetriever • 40 • updated 8 days ago by ATpoint ♦ 44k
0
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2
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203
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2
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Remove invariant sites from large MSA
alignment sequence written 5 months ago by lkatz • 0 • updated 9 days ago by Mensur Dlakic • 8.4k
<prev • 6,248 results • page 1 of 209 • next >
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