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How to have the count of reads mapping each transcript of a fasta file ?
alignment rna-seq written 18 hours ago by agtbeeman0 • updated 17 hours ago by h.mon31k
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Possibility of mapping opposite strand
fastq alignment star rna-seq written 1 day ago by dahun7310 • updated 1 day ago by swbarnes28.9k
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What Ever Happened To Alignment Servers?
alignment blat written 7.2 years ago by Jeremy Leipzig19k • updated 2 days ago by Biostar ♦♦ 20
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Remove invariant sites from large MSA
alignment sequence written 9 weeks ago by lkatz0 • updated 2 days ago by Biostar ♦♦ 20
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Indel realignment: GATK vs. BCFtools
sequence alignment snp written 3 days ago by martytriggers0 • updated 3 days ago by genomax91k
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BWA alignment generating errors
alignment bwa written 3 days ago by MAPK1.6k
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Online alignment for large fasta files
genome alignment sequence fasta written 3 days ago by mkh40 • updated 3 days ago by hugo.avila160
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Distance matrix based on the whole input alignment
python alignment biopython written 5 days ago by anasjamshed199420 • updated 5 days ago by ATpoint40k
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CUT&RUN analysis pipeline
alignment sequencing written 7 days ago by pixie@bioinfo1.4k • updated 6 days ago by rpolicastro2.0k
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many read aligned to the same position but with different variants
reads duplicates alignment written 7 days ago by yliueagle220 • updated 7 days ago by genomax91k
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bowtie2 using loop on bash with paired-ended reads
bowtie2 sequence alignment bash written 11 days ago by v.berriosfarias0 • updated 11 days ago by swbarnes28.9k
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Small RNA data analysis
alignment rna-seq written 7 weeks ago by jkkbuddika160 • updated 11 days ago by Biostar ♦♦ 20
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