Recent Locations •
All
Denmark, 2 minutes ago
United States, 3 minutes ago
United States, 3 minutes ago
United States, 6 minutes ago
London, 8 minutes ago
United States, 8 minutes ago
EMBL Heidelberg, Germany, 9 minutes ago
Recent Awards •
All
Popular Question to
Alexander
▴
200
Popular Question to
Matteo Schiavinato
★
3.6k
Commentator to
Michael Love
★
2.5k
Great Question to
xqyn
•
0
Recent Replies
Comment: How to convert data in r?
by
Ram
40k
> tidyr does not make anything tidy at all
I don't get your point. The code does not use tidyr (`%>%` is from `magrittr`) and there is no …
Comment: Unmapped Reads in Kallisto
by
GenoMax
134k
https://www.biostars.org/u/30020/ you can add a solution to this thread. It looks like this poster has a similar issue described in origina…
Comment: Network analysis with cytoscape
by
Chris
▴
200
Thanks xanderpico! That is great resources. There are many bioinformatics tools now which is hard to choose an appropriate one. I found thi…
Comment: Frustrated with DEA results
by
dsull
★
4.7k
Great suggestion on visualizing the data as well as doing DE between variables that you know should result in different gene expression pro…
Answer: Network analysis with cytoscape
by
xanderpico
▴
500
Hi Chris.
There are dozens of different directions you could go using Cytoscape. There is not just one analysis path. You mention "tran…
Comment: How to convert data in r?
by
Jeremy
▴
840
Great answer bk11.
star, you'll need the dplyr package to run this code. Just make the following the first line of code:
library(dpl…
Comment: Troubles launch IGV on Linux(Debian)
by
PoscaXVIII
•
0
Hi barslmn,
Thank you so much for your help it works perfectly. No more frozen black screen.
I just changed from wayland to Xorg (On the pa…
Comment: Complex multifactorial DE analysis with limma/edgeR based on rnaseq data
by
LChart
3.4k
> I tried a general "overall" group comparison of the "general" conditions, trying to model the "donor" effect and including it into the de…
Comment: How to convert data in r?
by
Kevin Blighe
86k
Funny how *tidyr* does not make anything tidy at all.
Why not just use (actually less characters):
data <- data.frame(c(
"A \t 22…
Comment: Frustrated with DEA results
by
Jeremy Leipzig
21k
If the FDR is killing your results, it's ok to filter out genes that are not informative
https://www.bioconductor.org/help/course-materials…
Comment: Github access with token headache
by
Begonia_pavonina
▴
110
I will post it in StackOverflow, should I delete this thread?
Comment: How to convert data in r?
by
bk11
★
1.2k
Hope OP will add biological context to this query and answering-
data <- c(
"A \t 2212 \t 2267 \t 2299",
" \t 2015 \t 2068…
Comment: Github access with token headache
by
Ram
40k
This post does not fit the theme of this forum. Just because you're trying to upload a bioinformatics pipeline does not mean this needs bio…
Traffic: 1765 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6