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Arrayexpress processed data
annotation next-gen beadchip R arrayexpress written 2 days ago by alessandro.palma • 20
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1
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93
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1
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build37 against hg19
vcf annotation annovar written 4 days ago by Daisy • 10 • updated 4 days ago by igor • 5.6k
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1
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89
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1
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How to annotate repeats?
sine annotation repeats line normalization written 4 days ago by Zee_S • 0 • updated 4 days ago by Beuss • 70
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how to annotate (rRNA, tRNA, Mt_rRNA, Mt_tRNA, etc) sequenced small RNA reads
annotation small rna rna-seq written 5 days ago by bioinforesearchquestions • 120
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2
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118
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KEGG mapping from de novo transcriptome annotation
rnaseq annotation kegg kobas written 19 days ago by pablo61991 • 40
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64
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best CDS prediction tool for online annotation submission
fasta annotation ghostkoala prodigal cds written 6 days ago by willnotburn • 20
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How to integrate interproscan results into a fasta file
sequence annotation alignment written 8 days ago by kamel • 0 • updated 8 days ago by Ram ♦ 14k
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46
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Gene calling and annotation for soil community
gene calling annotation written 10 days ago by xuling2015 • 10
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1
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78
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1
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Problems left-normalizing variants with bctools, GATK, combining with ANNOVAR annotations
annotation variant written 11 days ago by steve • 1.4k
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pheatmap: how to use legend information as row annotation?
legend R pheatmap annotation written 11 days ago by n85825 • 0
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1
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61
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1
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Annotation Term Overrepresentation/Enrichment Analysis
annotation kegg go written 11 days ago by Benni • 20 • updated 11 days ago by n85825 • 0
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81
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RNAseq data with no replicates.What novel or different analysis can be done??
annotation no replicates rna-seq written 12 days ago by ppnana • 0
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55
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Masking repeats in fungal genomes
annotation repeat masking fungi written 12 days ago by msobol • 0 • updated 12 days ago by WouterDeCoster ♦ 27k
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45
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Snpeff: clarification on gene fusion annotation
annotation fusion genefusion written 12 days ago by laura.mannarino • 0
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1
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489
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1
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Option -categorize in SNAP gene prediction.
annotation snap maker written 18 months ago by Picasa • 340 • updated 16 days ago by janneke.aylward • 0
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Genome Annotation shows more no. of Genes and less no. of proteins.
genome annotation bacterial genomics written 19 days ago by namgyalwangstuklama • 0
1
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1
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149
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1
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Query SwissProt using Java based on Annotation Score and Publication Number
swissprot java query protein annotation written 25 days ago by taojincs • 10
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101
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0
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Could this function that maps gene pairs to STRING Database be more efficient?
annotation stringdb R microarray written 6 weeks ago by arronar • 140 • updated 22 days ago by Biostar ♦♦ 20
2
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1
answer
132
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1
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Annotate transposon VCF file
annotation transposon written 26 days ago by cy.tang • 0 • updated 25 days ago by WouterDeCoster ♦ 27k
1
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2
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118
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2
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match gives me all NA in annotating my genes
gene R annotation written 5 weeks ago by F • 3.0k • updated 5 weeks ago by Satyajeet Khare • 1.2k
2
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1
answer
151
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1
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Difference between gene-based, region-based and filter-based annotation in ANNOVAR
gene R next-gen sequence annotation written 5 weeks ago by vivekruhela • 10 • updated 5 weeks ago by Kevin Blighe ♦ 16k
1
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1
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125
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Are there any similar alternatives to VEP and wAnnovar to annotate and postprocess a human genome Illumina VCF?
human genome annotation wannovar vep vcf written 5 weeks ago by mathisdead • 0 • updated 5 weeks ago by Pierre Lindenbaum ♦ 106k
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109
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Gene loss in subsequent round of maker for fungal genome annotation
annotation genome assembly maker written 5 weeks ago by urmi208 • 30
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167
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Annovar Annotation Dificulties
annotation indels written 6 weeks ago by hdtms • 10 • updated 5 weeks ago by Biostar ♦♦ 20
1
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1
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113
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1
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What web services can annotate and postprocess a complete human genome VCF coming from Illumina Tru-seq machine?
vcf illumina postprocessing annotation written 5 weeks ago by mathisdead • 0 • updated 5 weeks ago by andrew • 420
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Analysis Of Snps In Gene Deserts
annotation snp gwas written 7.5 years ago by Khader Shameer ♦ 17k • updated 5 weeks ago by Biostar ♦♦ 20
1
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1
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116
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1
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Variants with multiple functional annotations -- counting occurrences
vcf annotation written 5 weeks ago by olavur • 40 • updated 5 weeks ago by Kevin Blighe ♦ 16k
2
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1
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219
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5 follow
1
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Where I can download separate complete human chromosome genomes in GenBank format to do alignment?
genome annotation human genbank written 5 weeks ago by mathisdead • 0 • updated 5 weeks ago by a.zielezinski ♦ 8.2k
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92
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Genome Annotation, specific pipeline
annotation written 6 weeks ago by ohon.kin • 0
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137
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0
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Fungal genome annotation with or without RNA seq data
genome annotation fungi rna-seq written 6 weeks ago by msobol • 0
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