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Recent Votes
- what's the best sequencing read length based NGS for HLA typing ?
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Recent Replies
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C: Mothur: following SOP, received a weird alignment, screen.seqs failing by
gwrathe • 0
I downloaded the silva.nr_v132.align file and used pcr.seqs with my primer start and end points. ...
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C: Mothur: following SOP, received a weird alignment, screen.seqs failing by
Asaf ♦ 5.6k
Are you using a V4 file you downloaded or did you generate it to your region (v1-v3)?
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A: what's the best sequencing read length based NGS for HLA typing ? by
Charles Warden ♦ 6.8k
Maybe it depends upon which HLA gene you are trying to type? For example, I could get consistent...
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A: What are the best set of options to use while aligning using STAR? by
Charles Warden ♦ 6.8k
I have to admit that I am mostly using what has been recommended, more so than testing with sever...
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A: How do you rbind two data frames with a different number of columns without loos by
RamRS ♦ 22k
This is a pure R question, but here we go: use [tidyverse](https://www.tidyverse.org/) packages ...
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Hello Dineshkumar K! It appears that your post has been cross-posted to another site: https://bi...
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lieven.sterck ♦ 5.2k
A small educational note: if an answer was helpful you should upvote it, if the answer resolved y...
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C: BLAST database with local sequences by
Rashedul Islam • 310
That was very helpful, worked for me.
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RamRS ♦ 22k
No need for the sorry, it's just a bit of a learning curve :-)
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I found the answer to the problem. ---------- Problem 1: Path to blast was not right giving the...
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Hi, it seems like the bedtools command has changed. The correct command should be: bedtools ...
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Yep its quite common to get multiples with PDB, this can be because theres multiple internal matc...
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