Showing: apereset
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10
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196
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Using ape package in R to pull genbank sequences
ncbi R genbank ape written 3 months ago by krc30040 • updated 3 months ago by Kevin Blighe25k
2
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0
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223
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0
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0
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0
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446
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Phyloseq Weighted Unifrac Ordination Error
unifrac phyloseq pcoa ordination ape written 7 months ago by mzmd40 • updated 6 months ago by Kevin Blighe25k
0
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1
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284
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How to convert phylo object to hclust object in R
ape alignment R written 6 months ago by ttsutsui102810 • updated 6 months ago by felipelira30
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dist.alignment vs dist.dna for DNA distance calculation
R ape seqinr distance dna written 2.5 years ago by rimjhim.roy.ch70 • updated 8 months ago by sagitaninta0
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Trimming an alignment in R
R alignment ape written 2.9 years ago by Gon10 • updated 8 months ago by Biostar ♦♦ 20
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580
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1
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0
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0
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491
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dist.dna in ape package proportion of invariant sites
R dist.dna ape written 19 months ago by matthews.alix0 • updated 18 months ago by Biostar ♦♦ 20
1
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1.2k
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Phylogenetics in R: obtaining internal branch lengths
R phylogenetics ape written 2.3 years ago by spiral0170 • updated 2.2 years ago by Klaus S40
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1
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761
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Polytomies and tree comparison
phylogeny polytomy tree-comparison bioperl ape written 2.4 years ago by Lee Katz2.9k • updated 2.3 years ago by jhc2.7k
2
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1.0k
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annotating Multiple Phylogenetic trees on the basis of color
phylogenetic analyses R ape written 2.4 years ago by Sourabh J0 • updated 2.4 years ago by Dan Gaston7.0k
3
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4
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1.5k
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4
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How to get the outgroup of a rooted tree in R
R phylogenetics ape phangorn written 2.6 years ago by Gon10 • updated 2.5 years ago by guptapayal8150
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627
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0
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913
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4.1k
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Bootstrapping => consensus tree construction based on distance matrices
R phylogenetics bootstrap ape written 4.1 years ago by kaaschr0 • updated 4.1 years ago by David W4.7k
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2.2k
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APE (R) package NJ tree - what's the scale?
phylogeny R neighbor-joining ape written 4.3 years ago by biogirl140 • updated 4.3 years ago by David W4.7k
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