Showing: apereset
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5
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104
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Using ape package in R to pull genbank sequences
ncbi R genbank ape written 17 days ago by krc30040 • updated 17 days ago by Kevin Blighe19k
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0
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94
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0
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298
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Phyloseq Weighted Unifrac Ordination Error
unifrac phyloseq pcoa ordination ape written 4 months ago by mzmd40 • updated 3 months ago by Kevin Blighe19k
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1
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179
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How to convert phylo object to hclust object in R
ape alignment R written 4 months ago by ttsutsui102810 • updated 4 months ago by felipelira30
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1
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dist.alignment vs dist.dna for DNA distance calculation
R ape seqinr distance dna written 2.2 years ago by rimjhim.roy.ch50 • updated 5 months ago by sagitaninta0
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1.5k
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Trimming an alignment in R
R alignment ape written 2.7 years ago by Gon10 • updated 6 months ago by Biostar ♦♦ 20
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487
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0
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449
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dist.dna in ape package proportion of invariant sites
R dist.dna ape written 16 months ago by matthews.alix0 • updated 16 months ago by Biostar ♦♦ 20
1
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1.0k
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Phylogenetics in R: obtaining internal branch lengths
R phylogenetics ape written 2.0 years ago by spiral0170 • updated 2.0 years ago by Klaus S40
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700
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1
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Polytomies and tree comparison
phylogeny polytomy tree-comparison bioperl ape written 2.1 years ago by Lee Katz2.9k • updated 2.1 years ago by jhc2.7k
2
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931
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annotating Multiple Phylogenetic trees on the basis of color
phylogenetic analyses R ape written 2.2 years ago by Sourabh J0 • updated 2.2 years ago by Dan Gaston7.0k
3
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4
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1.3k
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4
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How to get the outgroup of a rooted tree in R
R phylogenetics ape phangorn written 2.3 years ago by Gon10 • updated 2.3 years ago by guptapayal8150
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593
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857
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3.9k
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Bootstrapping => consensus tree construction based on distance matrices
R phylogenetics bootstrap ape written 3.9 years ago by kaaschr0 • updated 3.9 years ago by David W4.7k
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APE (R) package NJ tree - what's the scale?
phylogeny R neighbor-joining ape written 4.0 years ago by biogirl140 • updated 4.0 years ago by David W4.7k
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