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Recent Votes
- A: DESeq2 Error: ncol(countData) == nrow(colData) is not TRUE
- A: Is it possible to run haplotypecaller in gnu parallel ?
- Basic normalization, batch correction and visualization of RNA-seq data
- C: Is it possible to run haplotypecaller in gnu parallel ?
- C: Is it possible to run haplotypecaller in gnu parallel ?
- A: RNA-Seq Data analysis
- A: RNA-Seq Data analysis
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Recent Replies
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C: RNA-Seq Data analysis by
sujitsilas • 0
Thank you for your insight!
-
A: Principle component analysis using VCF file as input. by
sayyarsehrish • 0
I run this command but it make only fim Start time: Thu Jan 21 02:35:20 2021 ...
-
C: Is it possible to run haplotypecaller in gnu parallel ? by
dare_devil • 1.3k
Update: When I executed your code one by one it started running. But When I saved your code in a ...
-
C: Is it possible to run haplotypecaller in gnu parallel ? by
dare_devil • 1.3k
Ya I have taken the same code provided by you. It gives an error `export: Illegal option -f`
-
C: RNA-Seq Data analysis by
dsull • 1.8k
Unfortunately no. Your problem is that there are no replicates and there's really nothing you can...
-
A: Is it possible to run haplotypecaller in gnu parallel ? by
dare_devil • 1.3k
The answer given by [Malcolm.Cook][1], [ole.tange][2] and [cpad0112][3] works well Method 1: ...
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C: Is it possible to run haplotypecaller in gnu parallel ? by
ole.tange • 4.0k
Are you writing exactly what I wrote? Because if you change `#!/bin/bash` to `#!/bin/sh` then it ...
-
C: Is it possible to run haplotypecaller in gnu parallel ? by
dare_devil • 1.3k
Cheers !! this works!!
-
C: RNA-Seq Data analysis by
sujitsilas • 0
Thank you! I'll look into that. I also have a .csv file format of the same experiment with FPKM d...
-
C: RNA-Seq Data analysis by
sujitsilas • 0
But is there a way to look at the differences in gene expression between the two days? I also ha...
-
C: RNA-Seq Data analysis by
seidel ♦ 7.1k
You can't use edgeR directly on the data quantified with Salmon because it generates abundance es...
-
A: RNA-Seq Data analysis by
dsull • 1.8k
You can't make volcano plots nor can you perform a statistical differential gene expression analy...
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