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Tool: Aquaria: simplifying discovery and insight from protein structures

snp tool sequence aquaria 3d structure written 3.9 years ago by Aquaria team • 90

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Recent Replies

A: converting bam file to bed by Alex Reynolds ♦ 26k
Via BEDOPS: $ bam2bed < reads.bam > reads.bed
C: converting bam file to bed by WouterDeCoster ♦ 35k
If you are using Windows 10 I recommend WSL: [the Windows Subsystem for Linux][1]. That will make...
C: converting bam file to bed by azzopardiannalise • 0
Yes I am using windows as this is part of my dissertation for MSc in statistics and I will be usi...
C: converting bam file to bed by WouterDeCoster ♦ 35k
The first question would be why you are trying to do this in R... Looks you are using windows, ca...
A: Split fastq according to barcodes by finswimmer ♦ 8.1k
Here a unix commandline only version: $ paste <(zcat input_1.fastq.gz|paste - - - -) <...
C: Fast LD computation from VCF files using tomahawk by Denis • 30
`include.lowest = T` helped me a lot, otherwise i would get: Warning message: Removed 3...
C: Filter the non-redundant NCBI database based on taxonomy by shenwei356 ♦ 4.3k
[Making nr blastdb for specific taxids](https://bioinf.shenwei.me/taxonkit/tutorial/)
C: Which tool can remove SignalP predicted signal peptides from FASTA file? by arman.vinck • 0
Alright! I have to process this information in order for me to fully understand what you've done ...
C: Problem in using picard.jar by R.A. • 50
Hello WouterDeCoster, No, it doesn't.
C: Split fatsq according to barcodes by Hughie • 10
The first version I wrote is too slow, and I found a python script [paired-end_barcode_splitter][...
C: Retrieve all compound ID, Description from a ko ID by jkkim • 20
I am sorry. For some reason, I removed the post. Sorry again.
C: Split fatsq according to barcodes by Hughie • 10
Thanks, format revised.

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