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Tool: Aquaria: simplifying discovery and insight from protein structures

snp tool sequence aquaria 3d structure written 3.9 years ago by Aquaria team • 90

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Recent Replies

A: BSmooth.tstat error due to NA by 897776177 • 0
hello，Taiki I use bsseq package for WGBS data analysis. and i meet the same problem just as you,d...
A: GMAP error - Problem Sequence: TRINITY_DN422143_c0_g1_i1 (301 bp) by tengwen2018 • 0
Dear TrentGenomics and dukecomeback, I have just encountered the same situations. Do you fix it?...
C: How to retrieve sets of protein sequences? by RamRS ♦ 19k
It's Ensembl, there's no `e` at the end.
C: bash & quickGO to download gene symbols of a GO term by Adrian Pelin • 2.2k
This is pretty sweet! Thanks!
C: Analysing two SNPs and their association with phenotypes, and co-occurence by abdi_g96 • 0
What do you mean by how many independent tests? The sample size is ~1500 if I've understood you c...
C: annotation - biomaRt - getBM - multiple entrez ID by Learner • 110
@Kevin Blighe instead the gene_name, please now try this one, you will see that you get error ...
C: How to retrieve sets of protein sequences? by vkkodali • 690
If you just want to extract the IDs and not care about the order they are in then you can skip th...
C: Analysing two SNPs and their association with phenotypes, and co-occurence by Kevin Blighe ♦ 33k
I see. So, how many independent tests are we talking about? - a few?; tens?; hundreds?; thousands...
C: Analysing two SNPs and their association with phenotypes, and co-occurence by abdi_g96 • 0
So these SNPs have been highlighted by other studies as possibly having an implication in food al...
C: Split fastq according to barcodes by genomax ♦ 59k
Index sequences are in both R1/R2 headers (see example you posted above). As suggested by @finswi...
C: Analysing two SNPs and their association with phenotypes, and co-occurence by Kevin Blighe ♦ 33k
Can you elaborate on what exactly you want to do? Do you want to test *every* SNP as pairs?; or, ...
C: annotation - biomaRt - getBM - multiple entrez ID by Kevin Blighe ♦ 33k
This is the first time that you mention *GO id*. What do you mean? Please try to explain in detai...

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