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Recent Votes
- C: Overlap two variable
- Which program, tool, or strategy do you use to visualize genomic rearrangements?
- FastQC kmer content output
- A: Analysing BAM files
- A: Down sampling BAM files for CNV detection
- A: converting Ovis aries Ensembl gene IDs into human orthologue Ensembl gene IDs
- A: Interpretting a p-value from a fisher exact test?
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Recent Replies
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C: Distinguish between homo- or heterozygote alleles if you sequence for a gene by
myrrlicht • 0
How should I know the differences in few nucleotides in the two alleles if this is what i want to...
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C: Overlap two variable by
zx8754 ♦ 8.7k
I think "PDD3 70-90" is already covered by "50-100", so it drops off. Might be a job for [Genomi...
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C: Analysing BAM files by
User000 • 270
The 5 genomes are just different varieties of the same species... So, just to be sure the methods...
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C: converting Ovis aries Ensembl gene IDs into human orthologue Ensembl gene IDs by
taghizadehkobra • 0
Thank you dear Emily
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C: QUAST ignoring bam files by
liorglic • 110
Yes they are - there is a .bam.bai file for every bam.
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C: QUAST ignoring bam files by
julien.fouret.fr • 20
Are you bam files indexed ( with samtools index ) ?
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A: QIIME 2 Denoising using DADA2 by
rahul.yadav • 10
Thank You so much gb for sharing your knowledge.
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A: Reference set ExomeDepth by
Bouzid.a • 0
Hi Angele, Did you find clarifications to your questions? I encountered the same ambiguity in my ...
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A: Definition of an isoform switching? by
adityasingharoy1 • 0
A single eukaryotic gene can give rise to different messenger RNA transcripts (mRNA) which are ca...
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A: converting Ovis aries Ensembl gene IDs into human orthologue Ensembl gene IDs by
Emily_Ensembl ♦ 20k
The easiest way to do this is [BioMart](http://www.ensembl.org/biomart/martview). Use the sheep g...
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A: GENCODE and untranslated regions by
Emily_Ensembl ♦ 20k
The UTRs are part of the transcript, and their positions within the cDNA are annotated. In the br...
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C: Deseq2 error,RNA-seq, usegalaxy by
anjuraas • 10
i checked the whole count files. but can't see any negative values. all the values are 0 and >0.
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