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Tool: Aquaria: simplifying discovery and insight from protein structures

snp tool sequence aquaria 3d structure written 6.1 years ago by Aquaria team • 90

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Recent Replies

A: Biomart mmusculus_gene_ensembl mm39 by Emily_Ensembl ♦ 21k
This was announced in our latest [release blog](https://www.ensembl.info/2021/02/15/ensembl-103-h...
C: Problems removing specific contig from .bam file by USA_225478 • 0
Hi Pierre, sorry for the late reply I've been off work for a few days. Thank you so much, this w...
C: LEfSe for multiple samples by Lila M • 880
You can use `lefser` for that propose. Have a look into the argument `one.against.one : for mu...
C: Get gene symbols from gene ids for mouse using BioMart by Kevin Blighe ♦ 71k
Hi, please take a look at functions such as `which()` and `match()`, and other functions from *dp...
C: Split multiallelic SNPs to biallelic from vcf by cpad0112 ♦ 15k
Thanks.
C: Split multiallelic SNPs to biallelic from vcf by User000 • 430
I updated the question, thanks a lot
C: Split multiallelic SNPs to biallelic from vcf by cpad0112 ♦ 15k
can you try posting example vcf with headers?
A: Convert Braker2 gff3 to EMBL flat file for ENA submission by m.eitel • 0
Thank you very much. I will give it a try on the latest annotation...
A: hapcut2 output and figures by Peter Chung • 130
the allele column will change / to | which means phased
C: Split multiallelic SNPs to biallelic from vcf by User000 • 430
It is OK if the tool would give a split results for GT, what I was meaning is I dont care about G...
C: Split multiallelic SNPs to biallelic from vcf by Pierre Lindenbaum ♦ 134k
> I need to get HF values split accordingly as well, like this: >> chrX 29 . G A...
C: How do I effectively automate BLAST searches without using a local database? by geosmin • 0
I have around 600 snippets for a phylogenetic analysis of cyanobacterial proteins. Right now I'm ...

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