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450k methylation array - 2 raw intensity values for same probe
450k array methylation illumina written 11 days ago by neuro3030 • 0 • updated 9 days ago by Charles Warden ♦ 7.3k
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173
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Question about why Illumina HumanExome SNP arrays appear to detect [A/T] and [C/G] SNPs by using two different probes.
array gwas snp illumina written 12 days ago by brett.vanderwerff • 140 • updated 11 days ago by Kevin Blighe ♦ 49k
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Combining different arrays in analysis
array R written 5 weeks ago by Scott McKay • 20
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241
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Detect gene expression signatures in own dataset
array rna-seq written 4 months ago by SunRise2019 • 0 • updated 3 months ago by vj • 410
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175
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Can I build a phylgenetic tree using SNPs obtained by differen techniques?
array gbs snp population genetics written 5 months ago by rimgubaev • 140
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Aligning SNP array probes to human genome with BLAT -- how to prioritize matches?
array probe alignment snp blat written 6 months ago by croberts377 • 0
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343
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CDF file for Cytoscan arrays
array cystoscan cdf written 7 months ago by jgarces • 10
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345
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Affymetrix A/B allele coding to reference 'forward' allele coding manual conversion
array allele coding snp affymetrix genotypes written 8 months ago by marcusanaymik • 10 • updated 8 months ago by Biostar ♦♦ 20
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340
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samr vs limma packages. How do you decide between them?
array R written 8 months ago by alfonsosaera • 0 • updated 8 months ago by Charles Warden ♦ 7.3k
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Trio SNP data to test script (preferably from Infinium Global Screening Array)
trio array microarray snp illumina written 10 months ago by kurt.cagri • 0
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329
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SNP array - Affy data analysis
array affymetrix 2.0 platform snp written 10 months ago by David_emir • 360
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Co-expression of two genes
array gene expression written 3.4 years ago by rob.costa1234 • 180 • updated 11 months ago by Biostar ♦♦ 20
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How to get the gene name with the array as headings in numpy-python?
array python numpy written 11 months ago by S AR • 50 • updated 11 months ago by Bastien Hervé ♦ 4.4k
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389
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designing loop for my Linear model function
array limma rna-seq written 12 months ago by rida.rehman • 0 • updated 12 months ago by genomax ♦ 73k
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How To Convert Illumina/Affy Array Data To Vcf Format
array data vcf format written 6.1 years ago by sheausean • 0 • updated 13 months ago by freeseek • 40
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How Were Snps On The Affy Cytoscan Hd Chosen?
array genotyping written 7.1 years ago by Adam • 990 • updated 13 months ago by ysh • 0
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407
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Error using preprocessNoob (minfi) for processing of Illumina array data
array illumina preprocessnoob minfi written 14 months ago by steffanchristiansen • 0
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7 follow
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GDC server down???
tcgabiolinks array methylation gdc written 16 months ago by Gabriel Wajnberg • 70 • updated 16 months ago by Jade • 40
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EPIC array annotation
array epic methylation written 16 months ago by bruce.moran • 650 • updated 16 months ago by andrew.j.skelton73 ♦ 5.8k
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Agilent single color array
array R microarray single color written 18 months ago by Leite • 420 • updated 17 months ago by Biostar ♦♦ 20
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Problem with adding element in a array (Perl script)
perl array script written 19 months ago by ArusjakGevorgyan • 20 • updated 19 months ago by Pierre Lindenbaum ♦ 123k
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426
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Missing Rate within arrays
array call rate plink snp written 21 months ago by vgenepi • 10
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514
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Using expression array data to predict ethnicty
array expression ethnicity written 20 months ago by Joe • 40 • updated 20 months ago by Kevin Blighe ♦ 49k
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457
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1
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txt normalized in r
array R txt normalized in r written 20 months ago by Joe Kherery • 60
8
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1
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2.5k
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7 follow
1
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Single-color Agilent array analyzing in R
agilent R array single-color 1-color written 22 months ago by Leite • 420
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1
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921
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"Studying R" Why don't I find the same results of the articles?
genome array expression gene written 23 months ago by Leite • 420
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How to generate .db package from a custom cdf?
array cdf written 3.4 years ago by Nachocab • 100 • updated 2.0 years ago by lessismore • 710
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1.6k
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what is 0 in the plink .bim file under allele1/2 column?
array chip allele plink microarray written 2.1 years ago by miaowzai • 170 • updated 2.1 years ago by chrchang523 ♦ 5.6k
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847
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Difference of CN probes and SNP probes on genotyping microchip arrays
array affymetrix snp cnv written 2.2 years ago by Jimbou • 690 • updated 2.2 years ago by Biostar ♦♦ 20
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No T base in the Illumina report file
array illumina snp written 2.3 years ago by nehal1610.ranabhatt • 0 • updated 2.3 years ago by Istvan Albert ♦♦ 81k
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