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<prev • 110 results • page 1 of 4 • next >
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Surrogate variable, celltype composition correction and overfitting in DNA methylation data
array sva methylation limma written 7 days ago by Papyrus • 620
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51
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Genotyping: array variants from WGS
array wgs written 10 days ago by German.M.Demidov • 1.9k
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5 follow
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Where Can I Find Ngs/Arrays Sample Datasets?
array dataset next-gen sequencing written 10.8 years ago by Jarretinha ♦ 3.3k • updated 15 days ago by Biostar ♦♦ 20
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Deviance in allele frequencies between arrays and WGS
array gwas prs wgs written 21 days ago by German.M.Demidov • 1.9k
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154
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About GEO2R microarray analysis
geo array geo2r microarray written 6 weeks ago by pedramasadi21 • 0
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[Newbie question] Best way to replace nucleotides in fasta files, numpy array or dictionaries?
fasta python array numpy dictionary written 8 weeks ago by Baeb • 0
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129
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Plink command to remove complementary SNPs
array chip plink snp written 9 weeks ago by irieljoerin • 40
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125
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Remove NA values gset result in 0 features
array microrna written 9 weeks ago by eleramos10 • 0 • updated 9 weeks ago by GenoMax ♦ 95k
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147
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RnBeads Greedycut command ???
array greedycut methylation rnbeads written 4 months ago by Ankit • 160
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274
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Batch correction methylation array datasets. any packages?
array methylation batch written 5 months ago by Ankit • 160
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208
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cwl: pass array of elements with repeated input flags
array gatk cwl written 5 months ago by cocchi.e89 • 120
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140
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OncoScan FFPE - genotype calls
array oncoscan snp genotyping written 6 months ago by a.loka92 • 0
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1
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221
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1
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How to understand Instance and Array in UKB phenotype data
array field ukb instance phenotype written 6 months ago by Shicheng Guo • 8.5k • updated 6 months ago by Sam • 3.3k
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How do I analyze MGMT methylation status from EPIC array data?
mgmt epic array methylation brain tumor written 7 months ago by kwanghoon • 20
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Single-color Agilent array analyzing in R
agilent R array single-color 1-color written 3.2 years ago by Leite • 1.1k • updated 8 months ago by g.felio.rolo • 0
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177
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oncoSNP stops run giving MATLAB function error
array snp-array oncosnp matlab snp written 9 months ago by SJ Basu • 30
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How to annotate illumina HumanHT-12_V3_0_R3_11283641_A.txt data
genome illumina array written 9 months ago by a.james • 210
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1
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282
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1
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pwm matrix from txt file python
array python numpy matrix written 9 months ago by vschultz • 0 • updated 9 months ago by shoujun.gu • 310
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How do I assess the quality control of Clariom_S_Human CEL files?
array R microarray clariom.s.human written 10 months ago by keremwai • 10 • updated 10 months ago by zx8754 ♦ 9.9k
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"Unable to connect to r server" - How can I solve this error in BrB Array Tools?
brbarraytools R array methylation written 11 months ago by andrechristianes • 0
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540
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1
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450k methylation array - 2 raw intensity values for same probe
450k array methylation illumina written 15 months ago by neuro3030 • 10 • updated 15 months ago by Charles Warden ♦ 8.0k
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Question about why Illumina HumanExome SNP arrays appear to detect [A/T] and [C/G] SNPs by using two different probes.
array gwas snp illumina written 15 months ago by curious • 470 • updated 15 months ago by Kevin Blighe ♦ 69k
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Combining different arrays in analysis
array R written 16 months ago by Scott McKay • 20
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525
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Detect gene expression signatures in own dataset
array rna-seq written 20 months ago by SunRise2019 • 10 • updated 18 months ago by vj • 450
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Can I build a phylgenetic tree using SNPs obtained by differen techniques?
array gbs snp population genetics written 21 months ago by rimgubaev • 190
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Aligning SNP array probes to human genome with BLAT -- how to prioritize matches?
array probe alignment snp blat written 22 months ago by croberts377 • 0
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803
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CDF file for Cytoscan arrays
array cystoscan cdf written 23 months ago by jgarces • 20
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Affymetrix A/B allele coding to reference 'forward' allele coding manual conversion
array allele coding snp affymetrix genotypes written 23 months ago by marcusanaymik • 10 • updated 23 months ago by Biostar ♦♦ 20
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954
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samr vs limma packages. How do you decide between them?
array R written 23 months ago by alfonsosaera • 20 • updated 23 months ago by Charles Warden ♦ 8.0k
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Trio SNP data to test script (preferably from Infinium Global Screening Array)
trio array microarray snp illumina written 2.1 years ago by kurt.cagri • 0
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