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RnBeads Greedycut command ???
array greedycut methylation rnbeads written 25 days ago by Ankit • 140
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142
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Batch correction methylation array datasets. any packages?
array methylation batch written 7 weeks ago by Ankit • 140
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142
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cwl: pass array of elements with repeated input flags
array gatk cwl written 9 weeks ago by cocchi.e89 • 110
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100
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OncoScan FFPE - genotype calls
array oncoscan snp genotyping written 3 months ago by a.loka92 • 0
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111
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1
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How to understand Instance and Array in UKB phenotype data
array field ukb instance phenotype written 3 months ago by Shicheng Guo • 8.4k • updated 3 months ago by Sam • 3.2k
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129
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How do I analyze MGMT methylation status from EPIC array data?
mgmt epic array methylation brain tumor written 4 months ago by kwanghoon • 10
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9 follow
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Single-color Agilent array analyzing in R
agilent R array single-color 1-color written 2.9 years ago by Leite • 1.1k • updated 5 months ago by g.felio.rolo • 0
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130
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oncoSNP stops run giving MATLAB function error
array snp-array oncosnp matlab snp written 6 months ago by SJ Basu • 30
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136
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How to annotate illumina HumanHT-12_V3_0_R3_11283641_A.txt data
genome illumina array written 6 months ago by a.james • 210
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215
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1
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pwm matrix from txt file python
array python numpy matrix written 6 months ago by vschultz • 0 • updated 6 months ago by shoujun.gu • 310
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175
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How do I assess the quality control of Clariom_S_Human CEL files?
array R microarray clariom.s.human written 7 months ago by keremwai • 10 • updated 7 months ago by zx8754 ♦ 9.7k
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180
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"Unable to connect to r server" - How can I solve this error in BrB Array Tools?
brbarraytools R array methylation written 8 months ago by andrechristianes • 0
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459
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450k methylation array - 2 raw intensity values for same probe
450k array methylation illumina written 12 months ago by neuro3030 • 10 • updated 12 months ago by Charles Warden ♦ 7.9k
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344
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Question about why Illumina HumanExome SNP arrays appear to detect [A/T] and [C/G] SNPs by using two different probes.
array gwas snp illumina written 12 months ago by curious • 450 • updated 12 months ago by Kevin Blighe ♦ 66k
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213
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Combining different arrays in analysis
array R written 13 months ago by Scott McKay • 20
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470
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1
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Detect gene expression signatures in own dataset
array rna-seq written 17 months ago by SunRise2019 • 0 • updated 15 months ago by vj • 450
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362
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Can I build a phylgenetic tree using SNPs obtained by differen techniques?
array gbs snp population genetics written 18 months ago by rimgubaev • 190
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450
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Aligning SNP array probes to human genome with BLAT -- how to prioritize matches?
array probe alignment snp blat written 18 months ago by croberts377 • 0
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696
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CDF file for Cytoscan arrays
array cystoscan cdf written 19 months ago by jgarces • 20
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627
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Affymetrix A/B allele coding to reference 'forward' allele coding manual conversion
array allele coding snp affymetrix genotypes written 20 months ago by marcusanaymik • 10 • updated 20 months ago by Biostar ♦♦ 20
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samr vs limma packages. How do you decide between them?
array R written 20 months ago by alfonsosaera • 20 • updated 20 months ago by Charles Warden ♦ 7.9k
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Trio SNP data to test script (preferably from Infinium Global Screening Array)
trio array microarray snp illumina written 22 months ago by kurt.cagri • 0
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1
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525
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SNP array - Affy data analysis
array affymetrix 2.0 platform snp written 23 months ago by David_emir • 380
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1.2k
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Co-expression of two genes
array gene expression written 4.4 years ago by rob.costa1234 • 250 • updated 24 months ago by Biostar ♦♦ 20
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699
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5 follow
1
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How to get the gene name with the array as headings in numpy-python?
array python numpy written 24 months ago by S AR • 50 • updated 24 months ago by Bastien Hervé ♦ 4.8k
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588
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designing loop for my Linear model function
array limma rna-seq written 2.0 years ago by rida.rehman • 0 • updated 2.0 years ago by genomax ♦ 91k
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1
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How To Convert Illumina/Affy Array Data To Vcf Format
array data vcf format written 7.1 years ago by sheausean • 0 • updated 2.1 years ago by freeseek • 100
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How Were Snps On The Affy Cytoscan Hd Chosen?
array genotyping written 8.1 years ago by Adam • 1000 • updated 2.1 years ago by ysh • 0
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Error using preprocessNoob (minfi) for processing of Illumina array data
array illumina preprocessnoob minfi written 2.2 years ago by steffanchristiansen • 0
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7 follow
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GDC server down???
tcgabiolinks array methylation gdc written 2.3 years ago by Gabriel Wajnberg • 70 • updated 2.3 years ago by Jade • 40
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