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<prev • 1,900 results • page 1 of 64 • next >
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40
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Assembly comparisons and reordering scaffolds
genome assembly sequence alignment written 2 hours ago by Mehmet • 170
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2
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100
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2
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Improving existing assembly using PacBIo reads
assembly alignment tool sequencing written 2 days ago by bhagyathimmappa • 0
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0
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69
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TopHat BAM file explanation
assembly rna-seq written 8 hours ago by qudrat • 0 • updated 8 hours ago by Pierre Lindenbaum ♦ 98k
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1
answer
80
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1
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PFM for CTCF in mm9 extremely difficult to find- or does one exist?
assembly written 23 hours ago by chrisclarkson100 • 50 • updated 23 hours ago by jared.andrews07 • 90
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0
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85
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samtools mpileup error
software error assembly next-gen sequence written 1 day ago by teresayahu • 0
2
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0
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108
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Sorted scaffolds of a draft genome according to a reference genome
genome assembly sequence alignment written 1 day ago by Mehmet • 170
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2
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146
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2
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separating bed file into separate files for every 100000 base pairs
assembly written 2 days ago by chrisclarkson100 • 50 • updated 2 days ago by Kevin Blighe • 1.2k
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2
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4.4k
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Which version of UCSC annotation are used in TCGA RNASeqV2 isoforms expression data ?
genome assembly next-gen rna-seq annotation written 3.3 years ago by jack • 680 • updated 3 days ago by -_- • 470
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0
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95
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Illumina paired end read header difference- SPAdes bwa run ERROR
software error assembly spades genome written 3 days ago by ranjeet.maurya • 0 • updated 3 days ago by genomax ♦ 33k
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2
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577
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2
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Assembly and annotation statistics collection of various eukaryote genomes
assembly n50 assembly size annotation written 3.3 years ago by Prakki Rama • 2.0k • updated 3 days ago by colindaven • 280
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2
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128
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2
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gc content file for human genome large and difficult to parse into separate chromosome files
assembly written 4 days ago by chrisclarkson100 • 50 • updated 4 days ago by igor • 4.5k
1
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2
answers
415
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2
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Bosst configure error
assembly abyss written 13 months ago by Andrey Yurchenko • 10 • updated 4 days ago by mike • 0
0
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0
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103
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0
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Regarding K mer analysis
genome assembly next-gen sequence written 4 days ago by lakhwanideepika • 0 • updated 4 days ago by WouterDeCoster ♦ 21k
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1
answer
110
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1
answer
Augustus/Maker2 failing due to invalid nucleotides in sequence
augustus assembly maker2 annotation written 4 days ago by harishk0201 • 10
1
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1
answer
140
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1
answer
Question: Normalization of read counts for Metagenomics data
genome R next-gen sequencing assembly written 5 days ago by phongphak.06 • 10 • updated 5 days ago by colindaven • 280
0
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1
answer
144
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1
answer
denovo pacbio assembly
assembly written 6 days ago by 1234anjalianjali1234 • 0 • updated 5 days ago by colindaven • 280
0
votes
0
answers
83
views
0
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require upload file into TRAPID
assembly written 7 days ago by majeedaasim • 20
1
vote
0
answers
149
views
5 follow
0
answers
refseq transcriptome annotation
assembly rna-seq sequencing written 9 days ago by Joe.waldron • 0
1
vote
1
answer
129
views
1
answer
how to show geographical relationship of contigs from the two assemblies
gene assembly alignment sequencing written 9 days ago by Mehmet • 170 • updated 9 days ago by h.mon ♦ 8.7k
1
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0
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136
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0
answers
sense versus antisense (plus or minus) sequence alignment
assembly sequence blast alignment sequencing written 17 days ago by a.alsayed.phd • 0
1
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2
answers
210
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2
answers
fastQC for Oxford Nanopore reads
assembly sequencing written 16 days ago by efratk • 0
2
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0
answers
104
views
0
answers
Subgenomes separation in hybrid species
genome assembly snp rna-seq sequencing written 12 days ago by Macspider • 1.5k
0
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0
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163
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0
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How to re-run ALLPATH-LG without OVERWRITE=True
assembly written 6 weeks ago by huangziyan11111 • 0 • updated 13 days ago by Biostar ♦♦ 20
7
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3
answers
1.6k
views
5 follow
3
answers
454 Gap Closures
assembly written 6.8 years ago by Lee Katz • 2.8k • updated 13 days ago by Biostar ♦♦ 20
0
votes
1
answer
699
views
1
answer
extract predicted gene sequences from gilmmer output
genome assembly gene myposts written 2.1 years ago by akhilvbioinfo • 100 • updated 14 days ago by Biostar ♦♦ 20
0
votes
1
answer
149
views
1
answer
What happened after coverage.hist in Abyss?
assembly abyss written 15 days ago by wangzz.email • 0 • updated 15 days ago by Jean-Karim Heriche ♦ 13k
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1
answer
109
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1
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Normalizing Human Samples in .bam format
assembly next-gen illumnia sequencing written 16 days ago by mittu1602 • 10 • updated 16 days ago by Devon Ryan ♦ 70k
0
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0
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143
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0
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ERROR: File supplied on command line; use -s, -pacbio-raw, -pacbio-corrected, -nanopore-raw, or -nanopore-corrected
assembly canu written 17 days ago by knudnornielsen • 0
1
vote
0
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370
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7 follow
0
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Canu ERROR: File supplied on command line; use -s, -pacbio-raw, -pacbio-corrected, -nanopore-raw, or -nanopore-corrected.
assembly pacbio canu written 5 months ago by lbrutscher • 10 • updated 17 days ago by knudnornielsen • 0
1
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1
answer
118
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1
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a script to be used with qsub command
assembly next-gen alignment written 18 days ago by Mehmet • 170 • updated 18 days ago by genomax ♦ 33k
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