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<prev • 2,626 results • page 1 of 88 • next >
1
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1
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49
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Need help to resolve trinity error
assembly written 8 hours ago by ashokkumar.mb • 0 • updated 8 hours ago by RamRS ♦ 19k
4
votes
0
answers
90
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0
answers
Submitting RNA-seq to Supercomputer
fasta assembly next-gen rna-seq written 12 hours ago by matthew.sinton • 0 • updated 12 hours ago by genomax ♦ 58k
0
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1
answer
73
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1
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How much data and how many libraries do we need for de-novo assembly?
genome assembly next-gen sequencing written 1 day ago by ahmad mousavi • 310 • updated 1 day ago by Carambakaracho • 570
8
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1
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189
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5 follow
1
answer
looping a list of trimed fasta files to run spades assembler
assembly loop sequence loop a list spades written 3 days ago by m.al_amiri • 20
7
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2
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1.8k
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2
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Find All K-Mers In One Set Of Sequences Not In The Other Set
assembly comparison written 6.8 years ago by David M • 550 • updated 1 day ago by Biostar ♦♦ 20
0
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1
answer
719
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1
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WGS for mtDNA variation
mtdna sequencing snp assembly written 2.1 years ago by waqasnayab • 160 • updated 1 day ago by Jeremy Leipzig ♦ 18k
0
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0
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93
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0
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How to Determine Which Bacterial Assembly to Use from NCBI database?
ncbi assembly written 2 days ago by zuhaibzulfiqarahmed • 0
6
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0
answers
120
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5 follow
0
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Too many contig after genome assembly with Spades
genome assembly sequence written 2 days ago by ahmad mousavi • 310
0
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0
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116
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0
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SPAdes/QUAST how many reads contribute to a contig
genome assembly written 26 days ago by bio171 • 0 • updated 3 days ago by Biostar ♦♦ 20
0
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1
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109
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1
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Annotation with de novo or genome guided transcriptome assembly
funannotate assembly trinity rna-seq annotation written 3 days ago by EarlyEvol • 0 • updated 3 days ago by h.mon ♦ 21k
3
votes
1
answer
83
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1
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Converting Blast output to GFF
genome assembly blast written 4 days ago by ahmad mousavi • 310 • updated 4 days ago by h.mon ♦ 21k
0
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1
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91
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1
answer
Where can I find Intergenic regions (non-rRNA), retrotransposons and Ribosomal RNA sequences?
assembly next-gen written 5 days ago by MAPK • 1.3k • updated 4 days ago by h.mon ♦ 21k
4
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1
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65
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1
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how to create a gff3 file of gap regions in an assembly?
assembly written 4 days ago by m.eitel • 0 • updated 4 days ago by Vijay Lakhujani ♦ 3.2k
3
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1
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2.0k
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1
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Split VCF to individual scaffolds
genome assembly sequence snp vcf written 3.3 years ago by krp0001 • 20 • updated 4 days ago by zx8754 ♦ 5.7k
6
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2
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225
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2
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plasmid assemby from Illumina reads - help!
assembly written 5 months ago by rebeccarenberg • 20
2
votes
1
answer
86
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1
answer
E coli Sequencing & Analysis
genome assembly alignment sequencing written 8 days ago by aw_gibbs • 0 • updated 5 days ago by rebeccarenberg • 20
0
votes
0
answers
92
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0
answers
From where should I retrieve the reference genomes of human microbiota?
assembly written 5 days ago by vitor.eca • 0
1
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0
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94
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0
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How to convert chrM variants from NC_001807.4 version coordinates to NC_012920.1 coordinates?
assembly snp written 5 days ago by bioinfo89 • 40
10
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1
answer
288
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1
answer
Exporting data from Genevestigator
gene genome assembly genevestigator written 3 months ago by bweil2 • 10
2
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2
answers
94
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2
answers
Batch rename RefSeq assembly for the corresponding organism name
genome assembly written 11 days ago by joaobotelho9 • 0
1
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1
answer
67
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1
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Need help to do single denovo assembly with multiple RNA seq data
assembly rna-seq written 6 days ago by ashokkumar.mb • 0 • updated 6 days ago by kristoffer.vittingseerup • 830
0
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0
answers
84
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0
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why I used bcftools mpilup and call commond, no indel variance were genearte?
assembly sequence bcftools tool snp written 6 days ago by lemon • 0 • updated 6 days ago by finswimmer ♦ 7.0k
1
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1
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106
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7 follow
1
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How to perform SOAPdenovo for many samples
assembly written 8 days ago by michaelijesse • 0 • updated 7 days ago by h.mon ♦ 21k
0
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0
answers
53
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0
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Can I create a GAF file from gff3?
genome annotation assembly written 7 days ago by bgbrink • 20
0
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2
answers
688
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2
answers
Annotate SNPs called from Trinity transcriptome assembly using annotations from Trinotate pipeline
assembly rna-seq blast written 14 months ago by TrentGenomics • 30 • updated 7 days ago by jfo • 0
1
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1
answer
88
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1
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Create a pseudo-haploid fasta file based genotype calls for an individual (vcf file)
vcf assembly sequence snp written 8 days ago by Jautis • 270 • updated 7 days ago by Len Trigg • 1.2k
0
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0
answers
73
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0
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Tools for integrating the long reads transcriptomic data into reference genome with gaps in specific region
genome assembly tool written 8 days ago by divinomas • 0 • updated 8 days ago by ATpoint ♦ 9.4k
7
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3
answers
171
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3
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Python script for generating Genomic windows of intervals 50kbp for Human reference genome Hg19
genome assembly written 10 days ago by nk778 • 0
3
votes
0
answers
88
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0
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Question converting different genetic file formats into another file
genome assembly alignment written 12 days ago by john.anderson.ivy • 0 • updated 9 days ago by Biostar ♦♦ 20
0
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0
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103
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0
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Reference database for shotgun metagenomics
assembly next-gen sequencing written 28 days ago by mrudhulaks • 0 • updated 9 days ago by Biostar ♦♦ 20
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