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51
votes
13
answers
8.5k
views
19 follow
13
answers
What is the best programming language for NGS data analysis pipeline development?
assembly rna-seq written 5.9 years ago by jack800 • updated 5.9 years ago by Bj√∂rn650
41
votes
12
answers
13k
views
23 follow
12
answers
Which Assembler To Use For Metagenomic Sequences?
assembly metagenomics written 10.0 years ago by Panos1.7k • updated 6.6 years ago by ugly.betty771.0k
75
votes
10
answers
17k
views
42 follow
10
answers
Assessing The Quality Of De Novo Assembled Data
assembly next-gen written 7.8 years ago by Prakki Rama2.4k • updated 19 months ago by Corentin450
36
votes
9
answers
14k
views
11 follow
9
answers
Circular Genome??
genome assembly written 9.1 years ago by Bdv310 • updated 4.8 years ago by 5heikki8.6k
81
votes
9
answers
25k
views
31 follow
9
answers
How To Assess The Quality Of An Assembly? (Is There No Magic Formula?)
assembly quality next-gen written 7.2 years ago by diltsjeri440 • updated 21 months ago by alslonik130
38
votes
9
answers
13k
views
27 follow
9
answers
Recommendations For Heterozygous Genome Assembly Software
genome assembly miseq illumina written 7.1 years ago by Leszek4.0k • updated 2.2 years ago by dmathog30
15
votes
8
answers
3.1k
views
8
answers
What to do after an genome assembly?
assembly next-gen rna-seq written 5.3 years ago by ol_ucla40 • updated 5.3 years ago by Bioinformatics_NewComer320
51
votes
8
answers
12k
views
16 follow
8
answers
What tools you use or know for PacBio Long Read error correction?
software assembly sequence sequencing written 5.2 years ago by Medhat8.6k • updated 4.9 years ago by pengchy410
26
votes
7
answers
8.8k
views
15 follow
7
answers
What Is The Most Memory-Efficient De Novo Assembler?
assembly memory hiseq written 8.9 years ago by toshnam620 • updated 8.9 years ago by Shaldenby10
47
votes
7
answers
12k
views
27 follow
7
answers
Best software to assemble bacterial genomes
illumina bacteria assembler assembly written 5.4 years ago by fhsantanna460 • updated 2.2 years ago by Biostar ♦♦ 20
26
votes
6
answers
2.3k
views
8 follow
6
answers
First thing to do when you receive your sequenced genome of interest.
genome assembly next-gen sequence written 5.8 years ago by Medhat8.6k • updated 5.8 years ago by lexnederbragt1.2k
16
votes
6
answers
5.4k
views
6
answers
paired end illumina reads
assembly paired end written 4.4 years ago by midox250 • updated 4.1 years ago by jomo018540
3
votes
6
answers
1.8k
views
6
answers
Standalone Multiple Sequence alignment tool
assembly alignment sequencing written 3.5 years ago by akhilvbioinfo150 • updated 2.4 years ago by Cupton70
21
votes
5
answers
5.9k
views
7 follow
5
answers
What Assembler To Use For Eukaryotes?
software assembly next-gen sequencing written 9.4 years ago by Ketil4.0k • updated 9.2 years ago by Yannick Wurm2.3k
39
votes
5
answers
7.4k
views
9 follow
5
answers
Cuda/Gpu Processing And Bioinformatics
assembly hardware written 9.4 years ago by Matt110 • updated 9.2 years ago by Alastair Kerr5.2k
20
votes
5
answers
7.0k
views
8 follow
5
answers
Soapdenovo Assembly Quality Assessment
assembly hiseq written 8.9 years ago by toshnam620 • updated 5.4 years ago by Biostar ♦♦ 20
39
votes
5
answers
8.1k
views
8 follow
5
answers
A Question About Hybrid Assembly
assembly illumina written 8.8 years ago by Lhl730 • updated 8.7 years ago by Benm710
25
votes
5
answers
5.1k
views
9 follow
5
answers
Detecting Polyploidy Using An Assembly
assembly written 8.6 years ago by Fabian Bull1.3k • updated 8.6 years ago by Philippe1.9k
19
votes
5
answers
3.8k
views
7 follow
5
answers
How To Deal With Un-Used Reads After De Novo Assembly?
assembly denovo read written 8.4 years ago by Lhl730 • updated 8.0 years ago by Michael Dondrup47k
4
votes
5
answers
2.6k
views
7 follow
5
answers
Small Genome Mapping Assembly
genome assembly mapping written 8.4 years ago by Nicolas Rosewick8.7k • updated 5.6 years ago by Joseph Hughes2.8k
15
votes
5
answers
6.4k
views
15 follow
5
answers
How To Assemble Chloroplast Genome?
genome assembly written 7.9 years ago by Biomonika (Noolean)3.1k • updated 4.8 years ago by nicolasdierckxsens30
17
votes
5
answers
3.9k
views
8 follow
5
answers
Applying Patches To Grch Assembly
genome assembly human written 7.8 years ago by Nikolay Vyahhi1.3k • updated 4.6 years ago by shuoguo0
14
votes
5
answers
4.8k
views
8 follow
5
answers
Tool Recommendations For Human Genome Assembly
genome assembly tools human written 7.1 years ago by Chris Cole740 • updated 3.0 years ago by always_learning1.0k
11
votes
5
answers
5.5k
views
8 follow
5
answers
Can Rnaseq Reads Be Used For Genome Assembly
assembly written 6.4 years ago by Lhl730 • updated 2.3 years ago by balaji40
48
votes
5
answers
22k
views
21 follow
5
answers
News: The New Grch38 Human Genome Browser Has Arrived!
assembly news grch38 hg38 ucsc written 6.1 years ago by Giovanni M Dall'Olio26k • updated 4.3 years ago by Jeremy Leipzig19k
6
votes
5
answers
5.0k
views
5 follow
5
answers
Metavelvet fails at Scaffolding stage
genome assembly velvet written 5.6 years ago by jamesT30 • updated 2.8 years ago by alfbenpa10
7
votes
5
answers
2.5k
views
5
answers
Forum: Suggested genome assembly workshop
assembly next-gen genome forum sequencing ngs written 5.4 years ago by Medhat8.6k • updated 4.4 years ago by David Langenberger9.3k
16
votes
5
answers
5.5k
views
8 follow
5
answers
6
votes
5
answers
1.9k
views
5
answers
Post Genome Assembly
sequencing alignment next-gen sequence assembly written 5.0 years ago by div60 • updated 5.0 years ago by orange30
4
votes
5
answers
5.2k
views
5
answers
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