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46
votes
13
answers
6.4k
views
14 follow
13
answers
What is the best programming language for NGS data analysis pipeline development?
assembly rna-seq written 3.5 years ago by jack680 • updated 3.5 years ago by Bj√∂rn620
41
votes
12
answers
11k
views
23 follow
12
answers
Which Assembler To Use For Metagenomic Sequences?
assembly metagenomics written 7.7 years ago by Panos1.5k • updated 4.3 years ago by ugly.betty771.0k
38
votes
10
answers
10k
views
25 follow
10
answers
Recommendations For Heterozygous Genome Assembly Software
genome assembly miseq illumina written 4.8 years ago by Leszek3.8k • updated 13 months ago by kingcohn20
51
votes
10
answers
9.1k
views
14 follow
10
answers
What tools you use or know for PacBio Long Read error correction?
software assembly sequence sequencing written 2.8 years ago by Medhat7.2k • updated 2.6 years ago by pengchy360
35
votes
9
answers
11k
views
10 follow
9
answers
Circular Genome??
genome assembly written 6.7 years ago by Bdv290 • updated 2.4 years ago by 5heikki6.9k
64
votes
8
answers
11k
views
29 follow
8
answers
14
votes
8
answers
1.9k
views
8
answers
What to do after an genome assembly?
assembly next-gen rna-seq written 2.9 years ago by ol_ucla40 • updated 2.9 years ago by Bioinformatics_NewComer210
26
votes
7
answers
7.0k
views
15 follow
7
answers
What Is The Most Memory-Efficient De Novo Assembler?
assembly memory hiseq written 6.6 years ago by toshnam610 • updated 6.6 years ago by Shaldenby10
74
votes
7
answers
14k
views
24 follow
7
answers
How To Assess The Quality Of An Assembly? (Is There No Magic Formula?)
assembly quality next-gen written 4.8 years ago by diltsjeri400 • updated 4.1 years ago by Prakki Rama2.0k
39
votes
7
answers
8.8k
views
21 follow
7
answers
Best software to assemble bacterial genomes
illumina bacteria assembler assembly written 3.0 years ago by fhsantanna340 • updated 2.9 years ago by dago2.3k
26
votes
6
answers
1.6k
views
8 follow
6
answers
First thing to do when you receive your sequenced genome of interest.
genome assembly next-gen sequence written 3.5 years ago by Medhat7.2k • updated 3.5 years ago by lexnederbragt1.2k
16
votes
6
answers
3.2k
views
6
answers
paired end illumina reads
assembly paired end written 2.1 years ago by midox190 • updated 21 months ago by jomo018130
3
votes
6
answers
707
views
6
answers
Standalone Multiple Sequence alignment tool
assembly alignment sequencing written 14 months ago by akhilvbioinfo110 • updated 22 days ago by Cupton40
21
votes
5
answers
4.4k
views
7 follow
5
answers
What Assembler To Use For Eukaryotes?
software assembly next-gen sequencing written 7.1 years ago by Ketil3.8k • updated 6.9 years ago by Yannick Wurm2.2k
39
votes
5
answers
5.7k
views
9 follow
5
answers
Cuda/Gpu Processing And Bioinformatics
assembly hardware written 7.0 years ago by Matt110 • updated 6.9 years ago by Alastair Kerr5.2k
9
votes
5
answers
4.9k
views
6 follow
5
answers
20
votes
5
answers
5.8k
views
8 follow
5
answers
Soapdenovo Assembly Quality Assessment
assembly hiseq written 6.5 years ago by toshnam610 • updated 3.1 years ago by Biostar ♦♦ 20
39
votes
5
answers
7.0k
views
8 follow
5
answers
A Question About Hybrid Assembly
assembly illumina written 6.5 years ago by Lhl720 • updated 6.3 years ago by Benm710
25
votes
5
answers
3.6k
views
8 follow
5
answers
Detecting Polyploidy Using An Assembly
assembly written 6.2 years ago by Fabian Bull1.2k • updated 6.2 years ago by Philippe1.8k
19
votes
5
answers
3.2k
views
7 follow
5
answers
How To Deal With Un-Used Reads After De Novo Assembly?
assembly denovo read written 6.1 years ago by Lhl720 • updated 5.7 years ago by Michael Dondrup43k
4
votes
5
answers
1.9k
views
7 follow
5
answers
Small Genome Mapping Assembly
genome assembly mapping written 6.0 years ago by Nicolas Rosewick5.7k • updated 3.2 years ago by Joseph Hughes2.3k
15
votes
5
answers
4.8k
views
15 follow
5
answers
How To Assemble Chloroplast Genome?
genome assembly written 5.6 years ago by Biomonika (Noolean)3.0k • updated 2.4 years ago by nicolasdierckxsens30
17
votes
5
answers
2.7k
views
7 follow
5
answers
Applying Patches To Grch Assembly
genome assembly human written 5.5 years ago by Nikolay Vyahhi1.1k • updated 2.3 years ago by shuoguo0
14
votes
5
answers
3.6k
views
8 follow
5
answers
Tool Recommendations For Human Genome Assembly
genome assembly tools human written 4.7 years ago by Chris Cole640 • updated 7 months ago by always_learning800
46
votes
5
answers
18k
views
19 follow
5
answers
News: The New Grch38 Human Genome Browser Has Arrived!
assembly news grch38 hg38 ucsc written 3.7 years ago by Giovanni M Dall'Olio25k • updated 23 months ago by Jeremy Leipzig17k
6
votes
5
answers
3.6k
views
5 follow
5
answers
Metavelvet fails at Scaffolding stage
genome assembly velvet written 3.3 years ago by jamesT30 • updated 5 months ago by alfbenpa10
7
votes
5
answers
1.8k
views
5
answers
Forum: Suggested genome assembly workshop
assembly next-gen genome forum sequencing ngs written 3.1 years ago by Medhat7.2k • updated 2.1 years ago by David Langenberger8.0k
15
votes
5
answers
3.8k
views
8 follow
5
answers
6
votes
5
answers
1.2k
views
5
answers
Post Genome Assembly
sequencing alignment next-gen sequence assembly written 2.6 years ago by div40 • updated 2.6 years ago by orange30
8
votes
5
answers
1.5k
views
5
answers
NaS (Nanopore Synthetic-long) help
assembly preprocessing program written 2.5 years ago by midox190 • updated 2.4 years ago by guillaume.gautreau44140
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