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75
votes
10
answers
17k
views
42 follow
10
answers
Assessing The Quality Of De Novo Assembled Data
assembly next-gen written 7.8 years ago by Prakki Rama2.4k • updated 19 months ago by Corentin450
48
votes
3
answers
4.1k
views
34 follow
3
answers
81
votes
9
answers
25k
views
31 follow
9
answers
How To Assess The Quality Of An Assembly? (Is There No Magic Formula?)
assembly quality next-gen written 7.2 years ago by diltsjeri440 • updated 21 months ago by alslonik130
48
votes
3
answers
9.0k
views
29 follow
3
answers
Tutorial: Genome Assembly Review Papers
assembly tutorial papers written 7.6 years ago by Istvan Albert ♦♦ 83k • updated 7.1 years ago by lh332k
31
votes
0
answers
19k
views
28 follow
0
answers
Tool: Tools to merge overlapping paired-end reads
assembly overlapping ngs fastq tool written 3.3 years ago by Abdul Rafay Khan1.1k • updated 20 months ago by kate.j.mckenzie10
38
votes
9
answers
13k
views
27 follow
9
answers
Recommendations For Heterozygous Genome Assembly Software
genome assembly miseq illumina written 7.1 years ago by Leszek4.0k • updated 2.2 years ago by dmathog30
47
votes
7
answers
12k
views
27 follow
7
answers
Best software to assemble bacterial genomes
illumina bacteria assembler assembly written 5.4 years ago by fhsantanna460 • updated 2.2 years ago by Biostar ♦♦ 20
41
votes
12
answers
13k
views
23 follow
12
answers
Which Assembler To Use For Metagenomic Sequences?
assembly metagenomics written 10.0 years ago by Panos1.7k • updated 6.6 years ago by ugly.betty771.0k
31
votes
2
answers
3.9k
views
23 follow
2
answers
48
votes
5
answers
22k
views
21 follow
5
answers
News: The New Grch38 Human Genome Browser Has Arrived!
assembly news grch38 hg38 ucsc written 6.1 years ago by Giovanni M Dall'Olio26k • updated 4.3 years ago by Jeremy Leipzig19k
51
votes
13
answers
8.5k
views
19 follow
13
answers
What is the best programming language for NGS data analysis pipeline development?
assembly rna-seq written 5.9 years ago by jack800 • updated 5.9 years ago by Bj√∂rn650
27
votes
0
answers
7.4k
views
17 follow
0
answers
Tool: Quast Is A Convenient Tool For Assembly Evaluation
assembly quality tool written 7.1 years ago by Nikolay Vyahhi1.3k • updated 3.8 years ago by lakhujanivijay4.8k
60
votes
3
answers
2.3k
views
17 follow
3
answers
51
votes
8
answers
12k
views
16 follow
8
answers
What tools you use or know for PacBio Long Read error correction?
software assembly sequence sequencing written 5.2 years ago by Medhat8.6k • updated 4.9 years ago by pengchy410
26
votes
7
answers
8.8k
views
15 follow
7
answers
What Is The Most Memory-Efficient De Novo Assembler?
assembly memory hiseq written 8.9 years ago by toshnam620 • updated 8.9 years ago by Shaldenby10
15
votes
5
answers
6.4k
views
15 follow
5
answers
How To Assemble Chloroplast Genome?
genome assembly written 7.9 years ago by Biomonika (Noolean)3.1k • updated 4.8 years ago by nicolasdierckxsens30
22
votes
2
answers
4.5k
views
13 follow
2
answers
8
votes
2
answers
2.0k
views
12 follow
2
answers
Assembling PacBio reads using a reference genome
assembly resequencing reference pacbio written 2.7 years ago by celeste50 • updated 14 months ago by mcsimenc10
31
votes
4
answers
543
views
12 follow
4
answers
36
votes
9
answers
14k
views
11 follow
9
answers
Circular Genome??
genome assembly written 9.1 years ago by Bdv310 • updated 4.8 years ago by 5heikki8.6k
9
votes
2
answers
4.5k
views
11 follow
2
answers
10x Supernova de novo assembly
10x assembly written 3.3 years ago by igor9.8k • updated 4 months ago by samnioue0
14
votes
2
answers
3.8k
views
11 follow
2
answers
Oxford Nanopore and Illumina hybrid assembly
assembly nanopore ont written 3.2 years ago by igor9.8k • updated 23 months ago by Carambakaracho2.0k
7
votes
1
answer
2.4k
views
11 follow
1
answer
kraken: unable to download the databases from ncbi
genome software error next-gen rna-seq assembly written 2.2 years ago by karthic100 • updated 2.2 years ago by Joseph Hughes2.8k
7
votes
3
answers
1.7k
views
11 follow
3
answers
18
votes
4
answers
3.3k
views
11 follow
4
answers
Remove sequences <300 bases from FASTA file
genome assembly next-gen sequencing written 20 months ago by zoppisemma10 • updated 20 months ago by harish260
13
votes
4
answers
3.3k
views
10 follow
4
answers
Variable Length Reads In De Novo Assembly
assembly written 9.9 years ago by Pauln60 • updated 9.2 years ago by Ryan Thompson3.4k
24
votes
2
answers
4.2k
views
10 follow
2
answers
Newbler And Ubuntu?
installation assembly linux written 9.4 years ago by Prohan350 • updated 9.0 years ago by Leonor Palmeira3.7k
24
votes
3
answers
10k
views
10 follow
3
answers
Mapping Reads Back To Assembly Contigs
assembly contigs mapping read written 8.0 years ago by David M550 • updated 8.0 years ago by ALchEmiXt1.9k
21
votes
4
answers
3.5k
views
10 follow
4
answers
6
votes
0
answers
3.7k
views
10 follow
0
answers
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