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72
votes
10
answers
16k
views
40 follow
10
answers
Assessing The Quality Of De Novo Assembled Data
assembly next-gen written 7.2 years ago by Prakki Rama2.3k • updated 12 months ago by Corentin380
81
votes
9
answers
23k
views
31 follow
9
answers
How To Assess The Quality Of An Assembly? (Is There No Magic Formula?)
assembly quality next-gen written 6.6 years ago by diltsjeri440 • updated 13 months ago by alslonik110
48
votes
3
answers
8.7k
views
29 follow
3
answers
Tutorial: Genome Assembly Review Papers
assembly tutorial papers written 7.0 years ago by Istvan Albert ♦♦ 81k • updated 6.5 years ago by lh331k
38
votes
10
answers
13k
views
27 follow
10
answers
Recommendations For Heterozygous Genome Assembly Software
genome assembly miseq illumina written 6.6 years ago by Leszek4.0k • updated 19 months ago by dmathog30
44
votes
7
answers
12k
views
25 follow
7
answers
Best software to assemble bacterial genomes
illumina bacteria assembler assembly written 4.8 years ago by fhsantanna440 • updated 19 months ago by Biostar ♦♦ 20
37
votes
3
answers
2.4k
views
25 follow
3
answers
41
votes
12
answers
12k
views
23 follow
12
answers
Which Assembler To Use For Metagenomic Sequences?
assembly metagenomics written 9.4 years ago by Panos1.7k • updated 6.0 years ago by ugly.betty771.0k
31
votes
2
answers
3.5k
views
23 follow
2
answers
25
votes
0
answers
15k
views
22 follow
0
answers
Tool: Tools to merge overlapping paired-end reads
assembly overlapping ngs fastq tool written 2.7 years ago by Abdul Rafay Khan1.0k • updated 12 months ago by kate.j.mckenzie10
47
votes
5
answers
21k
views
21 follow
5
answers
News: The New Grch38 Human Genome Browser Has Arrived!
assembly news grch38 hg38 ucsc written 5.5 years ago by Giovanni M Dall'Olio26k • updated 3.7 years ago by Jeremy Leipzig18k
48
votes
13
answers
8.1k
views
16 follow
13
answers
What is the best programming language for NGS data analysis pipeline development?
assembly rna-seq written 5.3 years ago by jack760 • updated 5.3 years ago by Bj√∂rn650
26
votes
7
answers
8.5k
views
15 follow
7
answers
What Is The Most Memory-Efficient De Novo Assembler?
assembly memory hiseq written 8.4 years ago by toshnam620 • updated 8.3 years ago by Shaldenby10
15
votes
5
answers
6.1k
views
15 follow
5
answers
How To Assemble Chloroplast Genome?
genome assembly written 7.3 years ago by Biomonika (Noolean)3.1k • updated 4.2 years ago by nicolasdierckxsens30
25
votes
0
answers
6.9k
views
15 follow
0
answers
Tool: Quast Is A Convenient Tool For Assembly Evaluation
assembly quality tool written 6.5 years ago by Nikolay Vyahhi1.2k • updated 3.2 years ago by lakhujanivijay4.3k
51
votes
10
answers
12k
views
14 follow
10
answers
What tools you use or know for PacBio Long Read error correction?
software assembly sequence sequencing written 4.6 years ago by Medhat8.4k • updated 4.3 years ago by pengchy410
8
votes
2
answers
1.7k
views
12 follow
2
answers
Assembling PacBio reads using a reference genome
assembly resequencing reference pacbio written 2.1 years ago by celeste50 • updated 7 months ago by mcsimenc10
19
votes
2
answers
3.0k
views
12 follow
2
answers
36
votes
9
answers
13k
views
11 follow
9
answers
Circular Genome??
genome assembly written 8.5 years ago by Bdv290 • updated 4.2 years ago by 5heikki8.5k
7
votes
1
answer
2.0k
views
11 follow
1
answer
kraken: unable to download the databases from ncbi
genome software error next-gen rna-seq assembly written 19 months ago by karthic100 • updated 19 months ago by Joseph Hughes2.7k
7
votes
3
answers
1.3k
views
11 follow
3
answers
16
votes
4
answers
1.6k
views
11 follow
4
answers
Remove sequences <300 bases from FASTA file
genome assembly next-gen sequencing written 13 months ago by zoppisemma10 • updated 13 months ago by harish220
13
votes
4
answers
3.1k
views
10 follow
4
answers
Variable Length Reads In De Novo Assembly
assembly written 9.3 years ago by Pauln60 • updated 8.6 years ago by Ryan Thompson3.4k
24
votes
2
answers
4.0k
views
10 follow
2
answers
Newbler And Ubuntu?
installation assembly linux written 8.8 years ago by Prohan350 • updated 8.5 years ago by Leonor Palmeira3.7k
24
votes
3
answers
9.4k
views
10 follow
3
answers
Mapping Reads Back To Assembly Contigs
assembly contigs mapping read written 7.4 years ago by David M550 • updated 7.4 years ago by ALchEmiXt1.9k
21
votes
4
answers
3.3k
views
10 follow
4
answers
6
votes
0
answers
3.1k
views
10 follow
0
answers
14
votes
2
answers
3.4k
views
10 follow
2
answers
Oxford Nanopore and Illumina hybrid assembly
assembly nanopore ont written 2.6 years ago by igor8.1k • updated 16 months ago by Carambakaracho1.5k
14
votes
2
answers
2.8k
views
10 follow
2
answers
Bacterial de novo genome assembly
de-novo genome next-gen sequencing assembly written 2.3 years ago by Paul80 • updated 2.3 years ago by Brian Bushnell16k
7
votes
4
answers
1.6k
views
10 follow
4
answers
39
votes
5
answers
7.0k
views
9 follow
5
answers
Cuda/Gpu Processing And Bioinformatics
assembly hardware written 8.8 years ago by Matt110 • updated 8.6 years ago by Alastair Kerr5.2k
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