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65
votes
8
answers
11k
views
31 follow
8
answers
48
votes
3
answers
7.2k
views
29 follow
3
answers
Tutorial: Genome Assembly Review Papers
assembly tutorial papers written 5.1 years ago by Istvan Albert ♦♦ 73k • updated 4.6 years ago by lh330k
38
votes
10
answers
10k
views
25 follow
10
answers
Recommendations For Heterozygous Genome Assembly Software
genome assembly miseq illumina written 4.6 years ago by Leszek3.8k • updated 10 months ago by kingcohn20
74
votes
7
answers
14k
views
24 follow
7
answers
How To Assess The Quality Of An Assembly? (Is There No Magic Formula?)
assembly quality next-gen written 4.7 years ago by diltsjeri400 • updated 3.9 years ago by Prakki Rama2.0k
41
votes
12
answers
11k
views
23 follow
12
answers
Which Assembler To Use For Metagenomic Sequences?
assembly metagenomics written 7.5 years ago by Panos1.5k • updated 4.1 years ago by ugly.betty771.1k
31
votes
2
answers
1.3k
views
23 follow
2
answers
39
votes
7
answers
8.4k
views
21 follow
7
answers
Best software to assemble bacterial genomes
illumina bacteria assembler assembly written 2.8 years ago by fhsantanna340 • updated 2.8 years ago by dago2.3k
46
votes
5
answers
18k
views
19 follow
5
answers
News: The New Grch38 Human Genome Browser Has Arrived!
assembly news grch38 hg38 ucsc written 3.5 years ago by Giovanni M Dall'Olio25k • updated 21 months ago by Jeremy Leipzig17k
26
votes
7
answers
6.8k
views
15 follow
7
answers
What Is The Most Memory-Efficient De Novo Assembler?
assembly memory hiseq written 6.4 years ago by toshnam610 • updated 6.4 years ago by Shaldenby10
15
votes
5
answers
4.7k
views
15 follow
5
answers
How To Assemble Chloroplast Genome?
genome assembly written 5.4 years ago by Biomonika (Noolean)3.0k • updated 2.3 years ago by nicolasdierckxsens30
46
votes
13
answers
6.2k
views
14 follow
13
answers
What is the best programming language for NGS data analysis pipeline development?
assembly rna-seq written 3.4 years ago by jack680 • updated 3.3 years ago by Björn620
50
votes
10
answers
8.8k
views
12 follow
10
answers
What tools you use or know for PacBio Long Read error correction?
software assembly sequence sequencing written 2.7 years ago by Medhat6.9k • updated 2.4 years ago by pengchy350
24
votes
2
answers
3.2k
views
10 follow
2
answers
Newbler And Ubuntu?
installation assembly linux written 6.8 years ago by Prohan340 • updated 6.5 years ago by Leonor Palmeira3.5k
35
votes
9
answers
10k
views
10 follow
9
answers
Circular Genome??
genome assembly written 6.5 years ago by Bdv290 • updated 2.2 years ago by 5heikki6.6k
21
votes
4
answers
2.3k
views
10 follow
4
answers
13
votes
2
answers
461
views
10 follow
2
answers
Bacterial de novo genome assembly
de-novo genome next-gen sequencing assembly written 4 months ago by Paul50 • updated 4 months ago by Brian Bushnell14k
39
votes
5
answers
5.6k
views
9 follow
5
answers
Cuda/Gpu Processing And Bioinformatics
assembly hardware written 6.8 years ago by Matt110 • updated 6.7 years ago by Alastair Kerr5.2k
22
votes
3
answers
6.6k
views
9 follow
3
answers
Mapping Reads Back To Assembly Contigs
assembly contigs mapping read written 5.5 years ago by David M520 • updated 5.5 years ago by ALchEmiXt1.8k
19
votes
0
answers
4.8k
views
9 follow
0
answers
Tool: Quast Is A Convenient Tool For Assembly Evaluation
assembly quality tool written 4.6 years ago by Nikolay Vyahhi1.1k • updated 15 months ago by Vijay Lakhujani1.2k
6
votes
2
answers
4.1k
views
9 follow
2
answers
Assessing Quality And Accuracy Of De Novo Genome Assembly
assembly quality genome similarity contigs blast written 3.9 years ago by a81526a60 • updated 2.4 years ago by h.mon8.6k
8
votes
2
answers
1.3k
views
9 follow
2
answers
10x Supernova de novo assembly
10x assembly written 9 months ago by igor4.5k • updated 11 weeks ago by amnoronha101640
3
votes
2
answers
322
views
9 follow
2
answers
Assembling PacBio reads using a reference genome
assembly resequencing reference pacbio written 10 weeks ago by celeste20 • updated 5 weeks ago by tjduncan0
27
votes
4
answers
3.9k
views
8 follow
4
answers
6
votes
3
answers
5.3k
views
8 follow
3
answers
Are There Any Substitutes For Sequencher By Gene Codes?
software assembly alignment written 6.7 years ago by Blunders1.1k • updated 17 months ago by ablanchetcohen1.1k
20
votes
5
answers
5.7k
views
8 follow
5
answers
Soapdenovo Assembly Quality Assessment
assembly hiseq written 6.4 years ago by toshnam610 • updated 2.9 years ago by Biostar ♦♦ 20
39
votes
5
answers
6.9k
views
8 follow
5
answers
A Question About Hybrid Assembly
assembly illumina written 6.3 years ago by Lhl720 • updated 6.1 years ago by Benm710
14
votes
2
answers
5.8k
views
8 follow
2
answers
Determining Fpkm Of De Novo Assembly Of Transcriptome
assembly fpkm cufflinks rna gff written 6.1 years ago by James Smith150 • updated 6.1 years ago by Michael Dondrup43k
25
votes
5
answers
3.5k
views
8 follow
5
answers
Detecting Polyploidy Using An Assembly
assembly written 6.0 years ago by Fabian Bull1.3k • updated 6.0 years ago by Philippe1.8k
8
votes
4
answers
4.1k
views
8 follow
4
answers
Denovo Assembly Of Paired And Mate Paired Reads
assembly metagenomics denovo written 4.6 years ago by sebabiokr10 • updated 4.6 years ago by Philipp Bayer4.6k
14
votes
5
answers
3.5k
views
8 follow
5
answers
Tool Recommendations For Human Genome Assembly
genome assembly tools human written 4.6 years ago by Chris Cole630 • updated 5 months ago by always_learning790
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