Showing: assemblyreset
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46
votes
5
answers
18k
views
19 follow
5
answers
News: The New Grch38 Human Genome Browser Has Arrived!
assembly news grch38 hg38 ucsc written 3.7 years ago by Giovanni M Dall'Olio25k • updated 23 months ago by Jeremy Leipzig17k
22
votes
3
answers
16k
views
5 follow
3
answers
What Does The "N50" Mean?
assembly written 7.6 years ago by Bioch'Ti990 • updated 6.9 years ago by Ketil3.8k
74
votes
7
answers
14k
views
24 follow
7
answers
How To Assess The Quality Of An Assembly? (Is There No Magic Formula?)
assembly quality next-gen written 4.8 years ago by diltsjeri400 • updated 4.1 years ago by Prakki Rama2.0k
64
votes
8
answers
11k
views
29 follow
8
answers
41
votes
12
answers
11k
views
23 follow
12
answers
Which Assembler To Use For Metagenomic Sequences?
assembly metagenomics written 7.7 years ago by Panos1.5k • updated 4.3 years ago by ugly.betty771.0k
35
votes
9
answers
11k
views
10 follow
9
answers
Circular Genome??
genome assembly written 6.7 years ago by Bdv290 • updated 2.4 years ago by 5heikki6.9k
38
votes
10
answers
10k
views
25 follow
10
answers
Recommendations For Heterozygous Genome Assembly Software
genome assembly miseq illumina written 4.8 years ago by Leszek3.8k • updated 13 months ago by kingcohn20
12
votes
2
answers
10k
views
2
answers
8
votes
1
answer
9.8k
views
1
answer
what is the difference between GRCh37 and hg19 ?
genome assembly alignment rna-seq written 2.9 years ago by jack680 • updated 2.9 years ago by Dan D6.2k
51
votes
10
answers
9.1k
views
14 follow
10
answers
What tools you use or know for PacBio Long Read error correction?
software assembly sequence sequencing written 2.8 years ago by Medhat7.2k • updated 2.6 years ago by pengchy360
9
votes
0
answers
9.1k
views
0
answers
News: Bio-Linux 8 is now available
assembly next-gen genome news alignment rna-seq written 3.3 years ago by rtliu2.0k • updated 2.6 years ago by liangqinsi20
7
votes
1
answer
8.9k
views
1
answer
Newbler Download
assembly differential-expression written 5.0 years ago by Nino20 • updated 5.0 years ago by Manu Prestat3.8k
39
votes
7
answers
8.8k
views
21 follow
7
answers
Best software to assemble bacterial genomes
illumina bacteria assembler assembly written 3.0 years ago by fhsantanna340 • updated 2.9 years ago by dago2.3k
48
votes
3
answers
7.4k
views
29 follow
3
answers
Tutorial: Genome Assembly Review Papers
assembly tutorial papers written 5.2 years ago by Istvan Albert ♦♦ 74k • updated 4.8 years ago by lh330k
39
votes
5
answers
7.0k
views
8 follow
5
answers
A Question About Hybrid Assembly
assembly illumina written 6.5 years ago by Lhl720 • updated 6.3 years ago by Benm710
26
votes
7
answers
7.0k
views
15 follow
7
answers
What Is The Most Memory-Efficient De Novo Assembler?
assembly memory hiseq written 6.6 years ago by toshnam610 • updated 6.6 years ago by Shaldenby10
22
votes
3
answers
6.9k
views
9 follow
3
answers
Mapping Reads Back To Assembly Contigs
assembly contigs mapping read written 5.7 years ago by David M520 • updated 5.7 years ago by ALchEmiXt1.8k
8
votes
3
answers
6.5k
views
3
answers
Annotate .bed file with gene names
genome assembly next-gen written 3.1 years ago by stevenlang123120 • updated 4 months ago by ilopez.70
46
votes
13
answers
6.4k
views
14 follow
13
answers
What is the best programming language for NGS data analysis pipeline development?
assembly rna-seq written 3.5 years ago by jack680 • updated 3.5 years ago by Bj√∂rn620
10
votes
1
answer
6.4k
views
1
answer
Velvet Assembly Problem
assembly coverage velvet written 7.0 years ago by Ajw30 • updated 6.9 years ago by Jeremy Leipzig17k
20
votes
3
answers
6.3k
views
6 follow
3
answers
What Is The N50 Contig Number (Not N50 Length)?
assembly written 5.8 years ago by Rduncan60 • updated 5.8 years ago by Fabian Bull1.2k
8
votes
4
answers
6.2k
views
6 follow
4
answers
17
votes
4
answers
5.9k
views
7 follow
4
answers
14
votes
2
answers
5.9k
views
8 follow
2
answers
Determining Fpkm Of De Novo Assembly Of Transcriptome
assembly fpkm cufflinks rna gff written 6.3 years ago by James Smith150 • updated 6.3 years ago by Michael Dondrup43k
8
votes
2
answers
5.8k
views
2
answers
Creating reference Index using Bowtie2
genome assembly next-gen alignment written 3.4 years ago by cvu110 • updated 2.9 years ago by peeyushsahu230
20
votes
5
answers
5.8k
views
8 follow
5
answers
Soapdenovo Assembly Quality Assessment
assembly hiseq written 6.5 years ago by toshnam610 • updated 3.1 years ago by Biostar ♦♦ 20
13
votes
2
answers
5.7k
views
2
answers
How does kmer length affect total assembly size?
assembly (velvet) written 2.6 years ago by StarCute110 • updated 2.6 years ago by Antonio R. Franco3.4k
39
votes
5
answers
5.7k
views
9 follow
5
answers
Cuda/Gpu Processing And Bioinformatics
assembly hardware written 7.0 years ago by Matt110 • updated 6.9 years ago by Alastair Kerr5.2k
6
votes
3
answers
5.5k
views
8 follow
3
answers
Are There Any Substitutes For Sequencher By Gene Codes?
software assembly alignment written 6.8 years ago by Blunders1.1k • updated 19 months ago by ablanchetcohen1.1k
14
votes
2
answers
5.4k
views
6 follow
2
answers
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