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81
votes
9
answers
25k
views
31 follow
9
answers
How To Assess The Quality Of An Assembly? (Is There No Magic Formula?)
assembly quality next-gen written 7.2 years ago by diltsjeri440 • updated 21 months ago by alslonik130
18
votes
2
answers
24k
views
2
answers
what is the difference between GRCh37 and hg19 ?
genome assembly alignment rna-seq written 5.3 years ago by jack800 • updated 3 months ago by Kevin Blighe56k
48
votes
5
answers
22k
views
21 follow
5
answers
News: The New Grch38 Human Genome Browser Has Arrived!
assembly news grch38 hg38 ucsc written 6.1 years ago by Giovanni M Dall'Olio26k • updated 4.3 years ago by Jeremy Leipzig19k
22
votes
3
answers
20k
views
5 follow
3
answers
What Does The "N50" Mean?
assembly written 10.0 years ago by Bioch'Ti1.0k • updated 9.2 years ago by Ketil4.0k
31
votes
0
answers
19k
views
28 follow
0
answers
Tool: Tools to merge overlapping paired-end reads
assembly overlapping ngs fastq tool written 3.3 years ago by Abdul Rafay Khan1.1k • updated 20 months ago by kate.j.mckenzie10
20
votes
2
answers
18k
views
2
answers
nr- protein database
assembly next-gen blast sequencing written 4.6 years ago by akhilvbioinfo150 • updated 3.0 years ago by gu.fernandezn0
75
votes
10
answers
17k
views
42 follow
10
answers
Assessing The Quality Of De Novo Assembled Data
assembly next-gen written 7.8 years ago by Prakki Rama2.4k • updated 19 months ago by Corentin450
14
votes
3
answers
16k
views
9 follow
3
answers
Bowtie2 parameters for best alignment
genome assembly alignment blog snp written 5.8 years ago by cvu150 • updated 22 months ago by saraholiver3070
0
votes
1
answer
14k
views
1
answer
Kobas.2.0 : KEGG annotation
assembly next-gen go rna-seq sequencing written 3.7 years ago by jinutchirayath0 • updated 3.7 years ago by WouterDeCoster43k
36
votes
9
answers
14k
views
11 follow
9
answers
Circular Genome??
genome assembly written 9.1 years ago by Bdv310 • updated 4.8 years ago by 5heikki8.6k
7
votes
1
answer
13k
views
1
answer
Files ending with .fna.gz, .gbff.gz, .gff.gz, .faa.gz & gpff.gz
assembly sequence written 3.9 years ago by Naresh60 • updated 3.9 years ago by Michael Dondrup47k
38
votes
9
answers
13k
views
27 follow
9
answers
Recommendations For Heterozygous Genome Assembly Software
genome assembly miseq illumina written 7.1 years ago by Leszek4.0k • updated 2.2 years ago by dmathog30
41
votes
12
answers
13k
views
23 follow
12
answers
Which Assembler To Use For Metagenomic Sequences?
assembly metagenomics written 10.0 years ago by Panos1.7k • updated 6.6 years ago by ugly.betty771.0k
47
votes
7
answers
12k
views
27 follow
7
answers
Best software to assemble bacterial genomes
illumina bacteria assembler assembly written 5.4 years ago by fhsantanna460 • updated 2.2 years ago by Biostar ♦♦ 20
51
votes
8
answers
12k
views
16 follow
8
answers
What tools you use or know for PacBio Long Read error correction?
software assembly sequence sequencing written 5.2 years ago by Medhat8.6k • updated 4.9 years ago by pengchy410
9
votes
0
answers
12k
views
0
answers
News: Bio-Linux 8 is now available
assembly next-gen genome news alignment rna-seq written 5.7 years ago by rtliu2.1k • updated 4.9 years ago by liangqinsi20
14
votes
1
answer
11k
views
1
answer
Error while running BWA mem
assembly next-gen alignment sequencing written 4.8 years ago by ravi.uhdnis180 • updated 18 months ago by RamRS26k
7
votes
2
answers
11k
views
2
answers
STAR aligner generating genomes takes long time
assembly rna-seq written 4.3 years ago by xcalle9120 • updated 23 months ago by msimmer92230
4
votes
1
answer
11k
views
1
answer
Where can I download the NCBI reference genome for mouse GRCm38
genome assembly written 4.8 years ago by lojomorris0 • updated 4.8 years ago by Evgeniia Golovina1.0k
7
votes
1
answer
10k
views
1
answer
Newbler Download
assembly differential-expression written 7.3 years ago by Nino20 • updated 7.3 years ago by Manu Prestat4.0k
2
votes
2
answers
10k
views
2
answers
24
votes
3
answers
10k
views
10 follow
3
answers
Mapping Reads Back To Assembly Contigs
assembly contigs mapping read written 8.0 years ago by David M550 • updated 8.0 years ago by ALchEmiXt1.9k
11
votes
3
answers
10k
views
3
answers
Annotate .bed file with gene names
genome assembly next-gen written 5.4 years ago by stevenlang123170 • updated 2.7 years ago by windsur20
16
votes
2
answers
9.7k
views
2
answers
How does kmer length affect total assembly size?
assembly (velvet) written 4.9 years ago by StarCute110 • updated 4.9 years ago by Antonio R. Franco4.4k
8
votes
4
answers
9.5k
views
6 follow
4
answers
8
votes
2
answers
9.3k
views
5 follow
2
answers
6
votes
2
answers
9.2k
views
2
answers
Generate consensus from BAM file
consensus assembly galaxy sam-tools written 5.2 years ago by blur110 • updated 5.1 years ago by thackl2.8k
14
votes
1
answer
9.1k
views
1
answer
HISAT2 build index
assembly rna-seq written 2.5 years ago by saj98110 • updated 2.5 years ago by h.mon29k
8
votes
2
answers
9.0k
views
2
answers
Creating reference Index using Bowtie2
genome assembly next-gen alignment written 5.8 years ago by cvu150 • updated 5.3 years ago by SP250
48
votes
3
answers
9.0k
views
29 follow
3
answers
Tutorial: Genome Assembly Review Papers
assembly tutorial papers written 7.6 years ago by Istvan Albert ♦♦ 83k • updated 7.1 years ago by lh332k
<prev • 3,528 results • page 1 of 118 • next >

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