Showing: atac-seqreset
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ATAC-seq vs Bisulfite-sequencing
epigenomics atac-seq bisulfite-seq rna-seq written 23 days ago by rtrende0 • updated 11 days ago by Charles Warden6.8k
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94
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ATAC-seq library preparation, and the number of cells
atac-seq written 18 days ago by deepseany0 • updated 17 days ago by ATpoint17k
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ATAC-seq fragment length distribution
atac-seq written 10 months ago by Grinch60
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84
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235
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282
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4
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Insert size of ~20bp with ATAC-seq?
alignment atac-seq sequencing written 3 months ago by a.rex190 • updated 3 months ago by ATpoint17k
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189
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Question about combining (technical?) replicates
merge atac-seq written 3 months ago by collmerr20 • updated 3 months ago by JC7.9k
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225
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5
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409
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270
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Iterative trimming using bowtie
bowtie2 iterative trimming alignment atac-seq written 4 months ago by ancient_learner610 • updated 3 months ago by Biostar ♦♦ 20
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137
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198
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8
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0
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ATAC-seq transcription factor binding prediction
transcription factor atac-seq rna-seq written 7 months ago by Lucy0 • updated 4 months ago by am26220
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250
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1
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177
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Differential Binding in Partek
partek chip-seq atac-seq written 4 months ago by DVA520 • updated 4 months ago by kgosche0
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367
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Duplicated ATAC-Seq peaks called by MACS2
macs peak calling macs2 atac-seq written 4 months ago by Gary450 • updated 4 months ago by geek_y9.7k
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240
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Merging peak files for unionized set
bedtools next-gen atac-seq written 4 months ago by aam4580 • updated 4 months ago by trausch1.3k
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219
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267
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Homer annotatePeaks.pl custom GTF
gtf homer atac-seq written 4 months ago by Lucy0
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330
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1
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2
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comparing ATAC-seq/ChIP-seq peaks
chip-seq atac-seq written 5 months ago by sckinta510 • updated 5 months ago by ATpoint17k
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375
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Finding motifs with Homer for obscure species.
genome homer atac-seq written 7 months ago by a.rex190 • updated 5 months ago by Biostar ♦♦ 20
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6 follow
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Explaining fragment distribution plots from ATAC-seq
atac-seq written 7 months ago by a.rex190 • updated 5 months ago by Biostar ♦♦ 20
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CENTIPEDE - values from fitCentipede
R atac-seq centipede written 7 months ago by Lucy0 • updated 5 months ago by Biostar ♦♦ 20
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