Showing: atac-seqreset
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Chromvar for single cell ATAC seq
chromvar single-cell atac-seq atac-seq written 10 days ago by jmah10 • updated 10 days ago by AidanQuinn30
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Heterogeneity from bulk ChIP-seq or ATAC-seq data
heterogeneity chip-seq atac-seq clustering written 5 weeks ago by msimmer92210 • updated 5 weeks ago by jared.andrews074.2k
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DESeq2 design matrix
deseq2 de analysis atac-seq written 6 weeks ago by mickey_9510 • updated 6 weeks ago by ATpoint26k
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PeakNarrow ATAC-Seq analysis
atac-seq narrowpeak written 2.2 years ago by Spacebio180 • updated 8 weeks ago by ATpoint26k
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ATAC-seq peak calling
peak calling macs2 atac-seq written 10 weeks ago by mickey_9510 • updated 10 weeks ago by ATpoint26k
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Bowtie2 alignment help for ATAC-seq
bowtie2 alignment data analysis atac-seq written 11 weeks ago by mrs.whirly0 • updated 10 weeks ago by ATpoint26k
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Finding differences in motif enrichment between ATAC peak samples?
homer atac-seq written 14 months ago by a.rex190 • updated 12 weeks ago by danvoronov10
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ATAC-seq macs2 peak splitting in sliding windows
atac-seq written 3 months ago by nancy0 • updated 12 weeks ago by danvoronov10
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ATAC-seq : strategies to have the list of the expressed genes
atac-seq sequencing written 19 months ago by anais139620 • updated 4 months ago by bm1160
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Number of Tn5 insertions in TCGA ATAC-Seq data
tcga atac-seq sequencing written 4 months ago by Mike1.4k • updated 4 months ago by ATpoint26k
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How can I find motifs under individual ATAC-peaks?
atac-seq written 14 months ago by a.rex190 • updated 4 months ago by gable_works20
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Assignment of distal regions to genes
atac-seq rna-seq tad written 4 months ago by ATpoint26k • updated 4 months ago by geek_y10k
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ATAC-Seq trimming reads to 36bp
atac-seq written 4 months ago by Bioinfo_2006110
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Peak calling for multiple replicates with Genrich
atac-seq peak-caling genrich written 7 months ago by linelr0 • updated 4 months ago by Friederike5.2k
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csaw - Htslib import errors and missing reads/chromosomes
csaw bam chip-seq atac-seq library written 17 months ago by reskejak20 • updated 5 months ago by xuzhougeng0
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Insert Size Metrics of ATAC-Seq data
picard atac-seq written 5 months ago by Bioinfo_2006110 • updated 5 months ago by igor8.9k
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Spikes in Insertsize too high
atac-seq written 5 months ago by xpan0 • updated 5 months ago by ATpoint26k
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ATAC-seq vs Bisulfite-sequencing
epigenomics atac-seq bisulfite-seq rna-seq written 6 months ago by rtrende10 • updated 6 months ago by Charles Warden7.5k
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