Latest
Open
RNA-Seq
ChIP-Seq
SNP
Assembly
Tutorials
Tools
Jobs
Forum
Planet
All »
Home
Log In
Showing: atac-seq • reset
or   Classic search
<prev • 45 results • page 1 of 2 • next >
2
votes
2
answers
279
views
5 follow
2
answers
ATACseq with STAR and macs2
macs2 dmrs atac-seq star written 7 weeks ago by Ice P • 0 • updated 49 minutes ago by simon.vanheeringen • 20
0
votes
1
answer
118
views
1
answer
PeakNarrow ATAC-Seq analysis
atac-seq narrowpeak written 6 days ago by Spacebio • 80 • updated 5 days ago by igor • 4.5k
5
votes
2
answers
141
views
2
answers
Genes around open regions
gene genes open atac-seq written 7 days ago by g.sathish.k • 0 • updated 7 days ago by Alex Reynolds ♦ 20k
0
votes
1
answer
110
views
1
answer
Identifying peaks of similar enrichment from ChIP-seq?
next-gen chip-seq atac-seq written 9 days ago by umbch • 0 • updated 9 days ago by jared.andrews07 • 80
0
votes
0
answers
101
views
0
answers
Metrics for comparing Hi-C and ATAC-seq
hi-c peaks metrics atac-seq written 15 days ago by iMorbit • 0
1
vote
0
answers
114
views
0
answers
Masking repeats in ATAC-seq data
repeats atac-seq deseq written 15 days ago by rbronste • 140
0
votes
0
answers
131
views
0
answers
Where are .motif files from homer knownResults?
homer chip-seq atac-seq motifs written 22 days ago by b.nota • 3.5k
6
votes
2
answers
2.2k
views
2
answers
Help understanding MACS2 --extsize and --shift
peak calling macs2 atac-seq written 13 months ago by datascientist28 • 290 • updated 6 weeks ago by xd_d • 60
1
vote
1
answer
280
views
1
answer
Comparing open chromatin data to ChromHMM model
chromhmm chip-seq atac-seq written 12 weeks ago by rbronste • 140 • updated 6 weeks ago by Biostar ♦♦ 20
0
votes
0
answers
240
views
0
answers
Job: Postdoctoral Research Associate - Computational Genomics, University of Virginia, Charlottesville, VA, USA
job chip-seq atac-seq genomics rna-seq written 7 weeks ago by clintm • 0
2
votes
0
answers
227
views
0
answers
Does read counts for ATAC-seq differential detection make sense?
atac-seq edger differential accessibility written 8 weeks ago by datascientist28 • 290
2
votes
2
answers
221
views
2
answers
Duplicates in ATAC-seq data
duplicates picard atac-seq samtools rmdup written 9 weeks ago by rbronste • 140 • updated 9 weeks ago by James Ashmore • 2.0k
1
vote
1
answer
258
views
1
answer
ATAC data analysis
next-gen atac-seq written 10 weeks ago by krushnach80 • 160 • updated 10 weeks ago by Kasthuri • 220
2
votes
0
answers
409
views
0
answers
Job: Fully funded PhD scholarship in bioinformatics, Joint PhD Programme in Molecular Biology (JUMBO), Italy
hi-c eqtl job rna-seq atac-seq written 11 weeks ago by Fabio Marroni • 1.4k • updated 11 weeks ago by Giovanni M Dall'Olio ♦ 25k
2
votes
2
answers
210
views
2
answers
Extracting Features That Appear In TSS Regions
chip-seq atac-seq written 3 months ago by armonazizi • 0 • updated 3 months ago by christacaggiano • 20
1
vote
1
answer
399
views
1
answer
Job: Core Bioinformatician (Research Associate) x2 : Cambridge, United Kingdom
next-gen chip-seq atac-seq rna-seq job written 3 months ago by alexsossick • 10 • updated 3 months ago by Bioinformatics_NewComer • 200
1
vote
0
answers
201
views
0
answers
How to deal with low-depth ChIP-seq / ATAC-seq samples
normalization chip-seq atac-seq low depth written 3 months ago by Vanilla • 30
0
votes
0
answers
192
views
0
answers
Normalizing CENTIPEDE footprint plots
R chip-seq atac-seq centipede footprinting written 5 months ago by rbronste • 140 • updated 4 months ago by Biostar ♦♦ 20
0
votes
0
answers
233
views
0
answers
Can I run nucleoatac with a consensus peak file?
atac nucleoatac atac-seq written 5 months ago by kennethcondon2007 • 820
1
vote
1
answer
290
views
1
answer
Nucleoatac - extending broadPeak regions
nucleoatac atac-seq written 5 months ago by kennethcondon2007 • 820 • updated 5 months ago by igor • 4.5k
5
votes
2
answers
743
views
2
answers
nucleosome positioning using ATAC-seq
nucleosome atac-seq written 8 months ago by igor • 4.5k • updated 5 months ago by kennethcondon2007 • 820
0
votes
0
answers
184
views
0
answers
CENTIPEDE data export question
R chip-seq footprinting centipede atac-seq written 5 months ago by rbronste • 140
6
votes
2
answers
1.3k
views
2
answers
mitochondrial blacklists ATAC-Seq
atac-seq written 19 months ago by simonjean434 • 50 • updated 6 months ago by kennethcondon2007 • 820
1
vote
0
answers
929
views
0
answers
Calling differential peaks on ATAC-seq data
peak calling macs2 atac-seq thor written 6 months ago by ldyer2006 • 0
0
votes
1
answer
491
views
1
answer
Signal-to-Noise Plots for NGS Data; Selection of Background Regions
ngs chip-seq atac-seq written 9 months ago by ATPoint • 1.1k
0
votes
0
answers
292
views
0
answers
Homer findMotifsGenome.pl error
homer chip-seq atac-seq motifs written 7 months ago by lvande • 40
5
votes
0
answers
542
views
0
answers
Tool: Control data for cross-contaminations on C1 ATAC-seq.
single-cell data atac-seq tool written 7 months ago by Charles Plessy • 2.2k
18
votes
2
answers
3.7k
views
7 follow
2
answers
Understanding ATAC-seq data
peak calling atac-seq sequencing written 7 months ago by Friederike • 420 • updated 7 months ago by Charles Plessy • 2.2k
2
votes
0
answers
362
views
0
answers
Should I be aligning to the Masked or Unmasked genome for ATAC-seq samples?
genome alignment atac-seq written 8 months ago by datascientist28 • 290
2
votes
1
answer
442
views
6 follow
1
answer
Cycling detection in ATAC-seq data
cycling metacycle atac-seq written 8 months ago by ccag • 20 • updated 8 months ago by Czh3 • 140
<prev • 45 results • page 1 of 2 • next >
Recent Votes
Recent Locations • All »
  • United States, just now
  • United States, just now
  • Newcastle Upon Tyne, just now
  • United Kingdom, 1 minute ago
  • United States, 1 minute ago
Recent Awards • All »
Recent Replies
Content
Help
Access
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 1676 users visited in the last hour