Showing: atac-seqreset
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Using featureCounts and DESeq2 to look at differences between ATAC-seq conditions.
R next-gen atac-seq written 13 hours ago by a.rex150 • updated 13 hours ago by ATpoint8.1k
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Acceptable duplication levels in ATAC-Seq data
sequencing atac-seq pcr duplicates written 7 days ago by bowwow0 • updated 6 days ago by Devon Ryan85k
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Finding differences in motif enrichment between ATAC peak samples?
homer atac-seq written 8 days ago by a.rex150 • updated 8 days ago by James Ashmore2.5k
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How can I find motifs under individual ATAC-peaks?
atac-seq written 12 days ago by a.rex150 • updated 12 days ago by jared.andrews071.3k
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Can be merged biological replicates?
chip-seq macs2 peak-calling atac-seq rna-seq written 8 weeks ago by star60 • updated 25 days ago by ZZzzzzhong110
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FRIP score ATAC-seq
frip atac-seq written 5 weeks ago by Lucy0 • updated 4 weeks ago by chaton0
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mitochondrial blacklists ATAC-Seq
atac-seq written 2.7 years ago by simonjean43450 • updated 5 weeks ago by RamRS18k
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ATAC-seq fragment length distribution
atac-seq written 9 weeks ago by Grinch20
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The problem of atac-seq analysis process steps with macs2
chip-seq atac-seq written 10 weeks ago by 110651827130 • updated 10 weeks ago by Devon Ryan85k
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6 follow
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Problem with the installation of Zinba(peak caller) on R
peak-calling atac-seq sequencing written 8 months ago by anais139620 • updated 3 months ago by Young0
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how can I transfer this different steps bedgraph format into 1bp file?
atac-seq linux written 3 months ago by 110651827130 • updated 3 months ago by cpad01129.4k
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How to compare bigwig tracks of two ATAC libraries.
atac-seq written 3 months ago by a.rex150 • updated 3 months ago by ATpoint8.1k
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How can I look at find 'open chromatin' from ATAC-seq data using MACS2
macs2 atac-seq written 3 months ago by a.rex150 • updated 3 months ago by ATpoint8.1k
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How can I map reads only of a certain length?
atac-seq bwa sequencing written 3 months ago by a.rex150 • updated 3 months ago by Pierre Lindenbaum113k
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ATAC-seq: differential peaks using macs2 bdgdiff yields strange results
macs2 atac-seq written 8 months ago by stephenz10 • updated 3 months ago by Alternative220
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Picard MarkDuplicates flag vs remove issue
duplicates picard atac-seq markduplicates written 4 months ago by s146906010 • updated 4 months ago by prakash510
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ATAC-seq DE analysis
atac-seq differential expression written 4 months ago by collmerr10 • updated 4 months ago by trausch1.1k
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ATAC-seq macs2 peak calling bampe mode extension shift
macs peaks chip-seq atac-seq written 4 months ago by nanoide10 • updated 4 months ago by Ricardo D'O. Albanus70
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Differential Peak Expression in ATAC-seq data
peak calling atac-seq differential expression written 22 months ago by ccag30 • updated 4 months ago by phosphodiester_bond20
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