Showing: atac-seqreset
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ATAC-seq peak calling with MACS
macs peaks chip-seq atac-seq written 18 months ago by igor5.2k • updated 11 weeks ago by Biostar ♦♦ 20
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DiffBind update warnings and running errors
diffbind dba.count atac-seq written 3 months ago by zhaolin200420080 • updated 3 months ago by Devon Ryan76k
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Set maximum insert size with BWA MEM?
bowtie2 atac-seq bwa written 3 months ago by James Ashmore2.3k • updated 3 months ago by Istvan Albert ♦♦ 75k
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ENCODE ATAC-seq pipeline peak calling
atac-seq written 18 months ago by igor5.2k • updated 3 months ago by Simply Bioinformatics70
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Where are .motif files from homer knownResults?
homer chip-seq atac-seq motifs written 5 months ago by b.nota3.6k • updated 3 months ago by Malcolm.Cook790
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ATACseq with STAR and macs2
macs2 dmrs atac-seq star written 7 months ago by Ice P0 • updated 5 months ago by simon.vanheeringen110
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PeakNarrow ATAC-Seq analysis
atac-seq narrowpeak written 5 months ago by Spacebio160 • updated 5 months ago by igor5.2k
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Genes around open regions
gene genes open atac-seq written 5 months ago by g.sathish.k0 • updated 5 months ago by Alex Reynolds22k
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Identifying peaks of similar enrichment from ChIP-seq?
next-gen chip-seq atac-seq written 5 months ago by umbch0 • updated 5 months ago by jared.andrews07640
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Help understanding MACS2 --extsize and --shift
peak calling macs2 atac-seq written 18 months ago by datascientist28300 • updated 6 months ago by xd_d70
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Comparing open chromatin data to ChromHMM model
chromhmm chip-seq atac-seq written 8 months ago by rbronste160 • updated 6 months ago by Biostar ♦♦ 20
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Duplicates in ATAC-seq data
duplicates picard atac-seq samtools rmdup written 7 months ago by rbronste160 • updated 7 months ago by James Ashmore2.3k
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ATAC data analysis
next-gen atac-seq written 7 months ago by krushnach80270 • updated 7 months ago by Kasthuri220
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Extracting Features That Appear In TSS Regions
chip-seq atac-seq written 8 months ago by armonazizi0 • updated 8 months ago by christacaggiano20
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Normalizing CENTIPEDE footprint plots
R chip-seq atac-seq centipede footprinting written 10 months ago by rbronste160 • updated 9 months ago by Biostar ♦♦ 20
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