Showing: awkreset
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2
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Extract a word from inside the text
R awk regex written 4 days ago by mostafarafiepour60 • updated 4 days ago by cpad011210k
5
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1
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188
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1
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awk and sed in bash script and no output
bash sed awk written 5 days ago by bk1130 • updated 5 days ago by Alex Reynolds26k
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2
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192
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2
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SRA files bulk downloads
wget awk aspera recursive linux written 19 days ago by S AR50
10
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2
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176
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2
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Filter VCF with bash commands
vcf grep awk bash written 15 days ago by ajuiwl30 • updated 15 days ago by dariober9.7k
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166
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Reformating bedGraph files in shell script
bedgraph ucsc bigwig chr awk written 10 weeks ago by m93100 • updated 15 days ago by Biostar ♦♦ 20
3
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1
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144
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1
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Separate fasta file for each locus
fasta radseq awk written 16 days ago by NM0
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557
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13 follow
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Forum: Awk in Bioinformatics
perl forum shell awk written 12 weeks ago by Shicheng Guo7.1k
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3
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212
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3
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compare two file to retrieve common lines
bash awk written 26 days ago by Sam80
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1
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216
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1
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4
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1
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137
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1
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How to separate a strain of MTB drug wise?
python grep sed loop awk written 4 weeks ago by S AR50 • updated 4 weeks ago by rizoic90
12
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1
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219
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1
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Add text in somewhere middle of line using information from the same line in file.
sed unix awk written 5 weeks ago by bk1130 • updated 5 weeks ago by jrj.healey8.8k
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2
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107
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2
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7
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1
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206
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6 follow
1
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Merge two SNP vcf files
vcf snp awk written 6 weeks ago by fufuyou100 • updated 6 weeks ago by zx87545.7k
10
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2
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259
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2
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Compare two genotype data frame and calculate percentage of differences
R linux awk written 7 weeks ago by dorarinyo8820 • updated 7 weeks ago by Pierre Lindenbaum114k
8
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1
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1.9k
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1
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Question: Mean and SD read length from a range of fastq files
fastq awk sed sequencing written 20 months ago by eoin30 • updated 8 weeks ago by savscosta0
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2
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224
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If a string appears twice in column 1, select the higher value in column 2
awk bash written 4 months ago by drkennetz360 • updated 9 weeks ago by zx87545.7k
3
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1
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247
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1
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6
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3
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313
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3
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How to extract certain tag value by key from sam/bam file?
awk linux samtools sam bash written 11 weeks ago by yech199020 • updated 11 weeks ago by Pierre Lindenbaum114k
8
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2
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213
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2
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Struggle with awk command
awk written 3 months ago by Bastien HervĂ©2.4k • updated 3 months ago by dariober9.7k
3
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1
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654
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1
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finding overlapping genes
overlap awk written 24 months ago by Afagh70 • updated 3 months ago by Biostar ♦♦ 20
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326
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1
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2
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1
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227
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Is there a code to find consensus motif
python C shell awk written 3 months ago by vinayjrao110 • updated 3 months ago by Carlo Yague4.3k
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1
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325
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1
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35
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4
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20k
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23 follow
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How To Filter Multi Fasta By Length??
awk written 5.3 years ago by HG1.1k • updated 3 months ago by RamRS19k
1
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238
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1
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Bedtools Slop for Specific Features
bedtools bedtool awk written 4 months ago by gtasource20 • updated 4 months ago by Jeffin Rockey770
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3
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5 follow
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Extract rows present in file1 and not in file 2
gene awk bash written 21 months ago by biostarsb20 • updated 4 months ago by zx87545.7k
4
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2
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271
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2
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Split ordered fasta file by alphabetical group using awk
fasta one-liner awk written 4 months ago by Josh Herr5.6k • updated 4 months ago by cpad011210k
3
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0
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195
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0
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compare two columns in text files
cat awk written 4 months ago by Sam80
10
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4
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469
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7 follow
4
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add header with awk
awk written 4 months ago by Sam80 • updated 4 months ago by toralmanvar660
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