Showing: bamreset
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Trim Reads From BAM files
bamutil bam trim written 22 hours ago by fusion.slope110 • updated 22 hours ago by genomax222k
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5 follow
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BAM to BIGWIG
bioinformatics github bam bigwig terminal written 2 days ago by robbenstijn0 • updated 2 days ago by EagleEye3.2k
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Necessary to close pysam.AlignmentFile?
python bam pysam written 3 days ago by AlchemistMoz10 • updated 3 days ago by Devon Ryan62k
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Anyone used BAMSurgeon to spike in 1KB insertions/deletions?
genome bam bamsurgeon svs written 17 months ago by sichan40 • updated 5 days ago by lzy0
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samtool flagstat question
bam samtools written 21 months ago by alex130 • updated 5 days ago by Biostar ♦♦ 10
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Tutorial: How to download raw sequence data from GEO/SRA
geo sra fastq tutorial download bam written 2.5 years ago by Obi Griffith14k • updated 8 days ago by al-ash0
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Error with correctGCBias in deepTools
deeptools next-gen bam written 10 days ago by clmin10 • updated 9 days ago by Devon Ryan62k
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Split a BAM within a chromosome without losing read pairs
bam rna-seq written 15 days ago by Ian Fiddes70 • updated 15 days ago by dariober7.3k
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Segmentation fault (core dumped) with Samtools index sorted.bam
bam samtools index written 16 days ago by deepak6430 • updated 16 days ago by Devon Ryan62k
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Help: Read Sam File and find chromosome
genome python bam sam sequence written 23 days ago by thiemo.moellenkamp0 • updated 23 days ago by Helene330
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How to convert extended CIGAR to regular CIGAR
cigar bam sam written 25 days ago by artemd0 • updated 25 days ago by Pierre Lindenbaum89k
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Automated Plotting Of Seq. Reads In A Bam File
viewer bam visualization written 5.6 years ago by sa9730 • updated 28 days ago by aiagutierrezdi0
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5 follow
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plot coverage for WES data
bam coverage plot written 4 weeks ago by koala0 • updated 4 weeks ago by michael.ante1.5k
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What software tools can merge FASTQs and BAMs (SAMs) separately ?
wgs ngs bam fastqs written 4 weeks ago by flight2212110 • updated 4 weeks ago by d-cameron300
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Conversion Of Blat Output To Sam/Bam
conversion format sam bam blat written 6.1 years ago by Michael Dondrup40k • updated 4 weeks ago by Botond Sipos1.5k
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How to start with bamsignals
bamsignal bioconductor bam chip-seq R written 5 weeks ago by Lila M 60 • updated 5 weeks ago by genomax222k
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samtools addreplacerg gives error
alignment samtools bam written 6 weeks ago by penington.j0 • updated 6 weeks ago by John Marshall970
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Contig's coverage and bam files.
contig coverage bam written 3 months ago by Picasa270 • updated 6 weeks ago by Biostar ♦♦ 10
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Weird issue with bam file generated by samtools
samtools bam bwa mem written 6 weeks ago by Vijay Lakhujani560 • updated 6 weeks ago by Devon Ryan62k
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Change signification in bam for duplicates
duplicates bam sam written 6 weeks ago by fedulka50 • updated 6 weeks ago by Devon Ryan62k
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6 follow
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SAM / BAM alignments
bam sam written 7 weeks ago by John10k
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Error sorted paired-end .bam using samtools
paired-end erne samtools bam written 9 weeks ago by holbrookjoanna20 • updated 7 weeks ago by John10k
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