Showing: bamreset
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How to find a variant in a particular position in a bam file only using samtools
bam samtools sam written 7 hours ago by tw61730 • updated 7 hours ago by swbarnes25.0k
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Bam file MC tag as integer
mc bam validatesamfile sam written 3 days ago by chariko30 • updated 10 hours ago by John Marshall1.5k
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Convert 2 SE bam to PE bam (alignment BWA mem)
alignment bwa bam written 28 days ago by mynameliuxiang0 • updated 1 day ago by zx87546.8k
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Bam header editing
header bam written 10 days ago by Huynh Nguyen0 • updated 9 days ago by Istvan Albert ♦♦ 79k
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Find common reads between two bam files
reads bam sequencing written 18 days ago by yl201910 • updated 18 days ago by Pierre Lindenbaum118k
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Tutorial: Generating consensus sequence from bam file
fasta consensus tutorial bam written 19 days ago by finswimmer11k • updated 19 days ago by WouterDeCoster37k
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How treat a Bam file with mutiple read groups (RG)
gatk next-gen picard read group bam written 19 days ago by zamani_20120 • updated 19 days ago by Pierre Lindenbaum118k
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RNA-Seq QC for aligned files (bam)
bam qc rna-seq written 20 days ago by genomics Newbie20 • updated 20 days ago by Friederike3.3k
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How to remove bam files that don't contain matching reads
bowtie2 bam samtools written 24 days ago by samlambrechts299130 • updated 24 days ago by Pierre Lindenbaum118k
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Should I remove duplicates?
duplicates next-gen bam written 27 days ago by F3.4k • updated 27 days ago by ATpoint14k
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Bam File With Maq
bam written 7.6 years ago by Sara130 • updated 29 days ago by Biostar ♦♦ 20
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Convert BAM files to paired end FASTQ
fastq bam samtools written 4 weeks ago by berke.toptas0 • updated 4 weeks ago by JC7.6k
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