Showing: bamreset
<prev • 1,054 results • page 1 of 36 • next >
2
votes
2
answers
287
views
6 follow
2
answers
2
votes
1
answer
1.6k
views
1
answer
BLAST geneate Output SAM file , Missing aligned sequences.
blast bam sam output rna-seq written 2.6 years ago by clear.choi30 • updated 3 days ago by RamRS17k
3
votes
1
answer
998
views
1
answer
BAM files for RRBS data in ENCODE Project
encode alignment rrbs bam download written 2.6 years ago by Shicheng Guo6.5k • updated 3 days ago by RamRS17k
4
votes
2
answers
88
views
2
answers
Count 0, 5, 20 covered sites in bam
wgs bam written 6 days ago by DVA480 • updated 6 days ago by Pierre Lindenbaum112k
3
votes
2
answers
117
views
6 follow
2
answers
discrepancy between reads
reads bam igv deletion written 9 days ago by n.mekkes0 • updated 7 days ago by swbarnes24.0k
0
votes
0
answers
62
views
0
answers
2
votes
2
answers
1.7k
views
2
answers
Problem iterating through BAM file using pysam
python sam bam forloop pysam written 2.6 years ago by c9r1y0 • updated 10 days ago by RamRS17k
7
votes
1
answer
1.1k
views
1
answer
Is there an authoritative source for optional BAM tags?
duplicates picard markduplicates bam written 2.6 years ago by John12k • updated 10 days ago by RamRS17k
3
votes
1
answer
1.8k
views
1
answer
Extracting Reads by position
alignment sam bam written 2.6 years ago by michael.madans9410 • updated 11 days ago by RamRS17k
3
votes
1
answer
182
views
1
answer
3
votes
1
answer
158
views
5 follow
1
answer
Extraction of partially mapped reads from BAM
partially mapped reads bam bwa written 22 days ago by nkausthu20 • updated 22 days ago by Pierre Lindenbaum112k
15
votes
0
answers
5.6k
views
0
answers
Extract reads within given region, and their mates
bam samtools written 3.2 years ago by user230613260 • updated 22 days ago by RamRS17k
1
vote
1
answer
100
views
1
answer
4
votes
1
answer
221
views
1
answer
Conversion of sam to bam using samtools
ngs bam samtools sam rna-seq written 8 weeks ago by abhilashreddy4950 • updated 23 days ago by Biostar ♦♦ 20
0
votes
0
answers
190
views
0
answers
Converting Bisulfite-seq BAM files to fastq
tcga methylation bisulfite-seq bam written 9 weeks ago by divyswar010 • updated 26 days ago by Biostar ♦♦ 20
0
votes
0
answers
113
views
0
answers
9
votes
3
answers
2.0k
views
6 follow
3
answers
7
votes
1
answer
168
views
1
answer
Down sampling BAM files for CNV detection
ngs bam dowsampling cnv written 4 weeks ago by Nandini670 • updated 4 weeks ago by WouterDeCoster32k
0
votes
0
answers
437
views
0
answers
7
votes
3
answers
165
views
3
answers
Normalising RNA-seq samples from bam files for UCSC Genome browser visualization
bam bigwig rna-seq ucsc written 5 weeks ago by m9390 • updated 4 weeks ago by Ian5.2k
4
votes
2
answers
161
views
5 follow
2
answers
best way to visualize bam file
visualize bam rna-seq written 5 weeks ago by lkianmehr10 • updated 4 weeks ago by Devon Ryan84k
13
votes
2
answers
181
views
5 follow
2
answers
Comparing reads of multiple BAM files (using getopts for parsing)
bam samtools seqtl getopts written 5 weeks ago by m9390 • updated 5 weeks ago by jrj.healey6.8k
0
votes
0
answers
165
views
0
answers
13
votes
1
answer
1.6k
views
1
answer
the number of reads that have mapped to the each gene
ribo-seq bam toptah2 rna-seq written 3.1 years ago by F3.1k • updated 5 weeks ago by Biostar ♦♦ 20
1
vote
1
answer
191
views
1
answer
3
votes
2
answers
339
views
6 follow
2
answers
Forum: is Amazon Web Services (AWS) useful?
forum bam rna-seq written 9 weeks ago by ahadli.farid20 • updated 6 weeks ago by Friederike2.1k
1
vote
1
answer
144
views
1
answer
Efficient processing of a read and its mate from bam file
htsjdk java bam samtools sam written 6 weeks ago by mhasa00630 • updated 6 weeks ago by finswimmer5.5k
0
votes
1
answer
1.5k
views
1
answer
why i cant have sam, sorted bam or bed by tophat output?
tophat bam written 3.1 years ago by F3.1k • updated 6 weeks ago by WouterDeCoster32k
3
votes
2
answers
520
views
2
answers
Iterating through paired-end reads in samtools / pysam
python bam sam written 6 months ago by olavur60 • updated 6 weeks ago by gizone110
223
votes
11
answers
125k
views
108 follow
11
answers
Tools To Calculate Average Coverage For A Bam File?
bam coverage sequencing written 7.7 years ago by Biomed4.4k • updated 6 weeks ago by WouterDeCoster32k
<prev • 1,054 results • page 1 of 36 • next >

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 1412 users visited in the last hour