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8
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how to adjust BAM header after extracting only mapped reads from BAM files
bam samtools written 2.6 years ago by Ric290 • updated 1 day ago by liorglic130
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Exclamation mark in Samtools mpileup output
bam samtools mapping mpileup written 2 days ago by pr10 • updated 2 days ago by gb1.5k
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Fixing BAM file generated without .alt index file during BWA
bam bwa written 7 days ago by Hadi M20 • updated 7 days ago by ATpoint29k
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93
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5 follow
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3
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113
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BWA mem bam output name sorted
bam samtools bwa written 11 days ago by User000280 • updated 11 days ago by ATpoint29k
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How convert a fastQ file to a Sam/Bam file
bam sam snp convert written 12 days ago by Adriel Rosa0 • updated 12 days ago by WouterDeCoster43k
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5 follow
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best way to combine RNAseq data from different sequencing batches
bam rna-seq sequencing written 13 days ago by s.l.lee0 • updated 13 days ago by swbarnes27.4k
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7 follow
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BAM files compression
bam written 13 days ago by User000280 • updated 13 days ago by Rm7.9k
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Corrupted bam file
bam samtools bwa written 5.5 years ago by dariober11k • updated 16 days ago by Biostar ♦♦ 20
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2
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86
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Sequencing index information from BAM
fastq bam index written 18 days ago by trodriguez20110 • updated 18 days ago by swbarnes27.4k
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135
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understanding pysam.AlignmentFile output
bam pysam sam written 4 weeks ago by bitpir140 • updated 4 weeks ago by onestop_data160
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122
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5 follow
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Aligning, Sorting and Converting to bam at the same command - possible?
alignment sorting bam written 5 weeks ago by Samuel0 • updated 5 weeks ago by swbarnes27.4k
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BAM file and Bedgraph file don't match after bedtools genomecov?
bam rna-seq written 5 weeks ago by albert.dayuan.yu0 • updated 5 weeks ago by Jorge Amigo11k
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remove primer sequences from BAM file
bam primer written 18 months ago by J.F.Jiang800 • updated 6 weeks ago by hongen.hugo.xu0
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134
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Deduplication using UMItools
duplication picard umitools bam rna-seq written 6 weeks ago by Ati30 • updated 6 weeks ago by Devon Ryan94k
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Extract all BAM reads that intersect a given region using the BAI index
bai tools bam index written 7 weeks ago by bugmaster0 • updated 7 weeks ago by swbarnes27.4k
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19 follow
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Where Can I Download Some Bam Files?
bioinformatics bam rna-seq written 7.8 years ago by snakesgun130 • updated 8 weeks ago by Roman Valls GuimerĂ 530
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223
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197 follow
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Tutorial: How to download raw sequence data from GEO/SRA
geo sra fastq tutorial download bam written 5.5 years ago by Obi Griffith18k • updated 9 weeks ago by Darill40
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6 follow
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Insert Size For Illumina Gaiix Paired-End Library From Sam/Bam File
illumina next-gen sam bam written 7.5 years ago by bioinfo740 • updated 10 weeks ago by Gabriel R.2.7k
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