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written 7 months ago by
raquelgarza95 • 40
• updated
7 months ago by
h.mon ♦ 27k
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Recent Replies
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C: How does base quality / mapping quality affect germline calling by
ATpoint ♦ 24k
Just fyi, mappability is something different than you seem to think. Of course the MAPQ is influe...
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C: Is it scientifically feasible to compare two samples of different sizes, while v by
Mensur Dlakic • 1.7k
[**This thread**][1] may be helpful. [1]: https://www.biostars.org/p/397230/
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C: PLINK: missing covariates? by
chrchang523 ♦ 5.6k
Can you post the first 10 lines of the plink.fam and plink.cov files?
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C: Plink --score generates different output for same dataset by
chrchang523 ♦ 5.6k
This is being addressed at https://groups.google.com/forum/#!topic/plink2-users/5sbfhUoj2ms .
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C: parent GO terms by
biofalconch • 380
I'd recommend looking at [this thread][1] ;) [1]: https://www.biostars.org/p/294268/
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C: Assembly and read comparison using kmers by
Corentin • 430
Yes, everything should be linked to the project. Don't forget WouterDeCouster answer, all of the...
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C: How does base quality / mapping quality affect germline calling by
WouterDeCoster ♦ 41k
Please add a link to the question on the GATK forum
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C: How to install bamtofastq utility in my terminal? by
F. Golestan • 20
That helped a lot. Many thanks for your great explanation and guide.
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C: Multiple Sequence Alignment viewers or How to Build a Conservation Plot by
Joe ♦ 14k
My go-to's are usually Jalview, LaTeX (but this requires a bit of work), or, something else you c...
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A: Genome draft sequences by
h.mon ♦ 27k
>I want to align bacterial genome draft to its paired - end reads You should map the reads to...
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C: Phylogenetic tree with 0,1 matrix as the input? by
Shicheng Guo • 7.8k
Great. I will check these two tools. Thanks for the suggestion.
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C: Rename fasta headers using a variable already present in the header? by
RamRS ♦ 24k
Like I said in an earlier comment, > Instead of using awk to replace headers, go for BBUtils.
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