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<prev • 9 results • page 1 of 1 • next >
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Reads detected/"spill over" on introns after using bamCoverage function from deepTools
bamcoverage intron bigwig deeptools written 14 days ago by kdcastillo • 0 • updated 2 days ago by Biostar ♦♦ 20
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Getting different values from deeptools bamCoverage CPM normalization, and from manually normalizing using samtools mpileup
deeptools bamcoverage atac-seq normalization cpm written 4 months ago by rjd254 • 0 • updated 4 months ago by ATpoint ♦ 44k
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6 follow
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SizeFactors for BAM normalization
deeptools deseq2 sizefactors bamcoverage written 5 months ago by Anand Rao • 350 • updated 5 months ago by Devon Ryan ♦ 98k
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Bamcoverage unique mapping reads
bamcoverage multiplemapping rna-seq written 6 months ago by liang795 • 0 • updated 6 months ago by Pierre Lindenbaum ♦ 133k
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ATAC-seq coverage tracks using bamCoverage from Deeptools
deeptools bigwig atac-seq bamcoverage written 7 months ago by mickey_95 • 30
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what is difference between -i and -ibam in genomCoverage?
bedtools deeptools genomecoverage bamcoverage written 23 months ago by star • 270 • updated 23 months ago by ATpoint ♦ 44k
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5 follow
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From BAM to BAI to BIGWIG
bigwig index samtools bai bamcoverage written 23 months ago by compuTE • 60 • updated 23 months ago by h.mon ♦ 32k
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Read coverage normalization
rnaseq bamcoverage read coverage normalization written 2.0 years ago by iraia.munoa • 100
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Different bigwig file sizes between BedgraphToBigwig and bamCoverage
bamcoverage ucsc bigwig deeptools bedgraphtobigwig written 2.4 years ago by m98 • 280
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