Showing: bbdukreset
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bbduk flags 'tossbrokenreads' and 'nullifybrokenquality'
bbduk bbmap flags written 28 days ago by Anand Rao250 • updated 28 days ago by michael.ante3.5k
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BBDuk does not remove all adapters
trimming bbduk rna-seq truseq adapters written 7 weeks ago by f.dinesh0 • updated 7 weeks ago by genomax74k
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How to hide console output from BBduk
bbduk written 13 months ago by bnorris8230 • updated 7 months ago by hobi0
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Java error message when using BBDuk
genome java bbduk qc bbtools written 8 months ago by c.e.chong20 • updated 8 months ago by genomax74k
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Bulk quality interleaving with bbmap reformat command
reformat loop bbduk bbmap bash written 11 months ago by Longshotx 20 • updated 9 months ago by ross_whetten10
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BBduk ftm parameter
parameters bbduk written 15 months ago by lieven.sterck6.2k
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Metagenomics: rationale behind Q trimming
illumina metagenomics bbduk quality trimming written 16 months ago by f.a.galkin40 • updated 16 months ago by finswimmer12k
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Using BBDuk to trim degenerate primers off of amplicon reads
bbduk written 18 months ago by t89oconnell10 • updated 18 months ago by genomax74k
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Poly A trimming from RNA-seq data by bbduk (bbmap package)
polya trimming bbduk bbmap rna-seq written 18 months ago by seta1.2k • updated 18 months ago by WouterDeCoster42k
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BBDuk output different sized paired end reads
preprocessing bbduk bbmap written 18 months ago by GLFrey20 • updated 18 months ago by h.mon28k
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bbduk for pre-processing
reads pre-processing bbduk bbmap written 24 months ago by deepti1rao30 • updated 24 months ago by genomax74k
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Read trimming with BBDuk
read trimming bbduk bbmap written 2.5 years ago by seta1.2k • updated 2.5 years ago by genomax74k
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BBDuk and qtrim parameter
trimming bbduk written 3.6 years ago by int11ap1380 • updated 3.6 years ago by Brian Bushnell16k
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Faster alternative to Prinseq PE trimming polyN
prinseq bbduk rna-seq written 3.7 years ago by umn_bist330 • updated 3.7 years ago by RamRS24k
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