Showing: bcftoolsreset
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3
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50
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How does bcftools isec do the intersection?
bcftools isec written 1 day ago by Hadi M10 • updated 1 day ago by finswimmer8.8k
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1
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93
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1
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Variant calling by using samtools and bcftools
variant calling samtools bcftools written 3 days ago by hasani.iut640 • updated 3 days ago by ATpoint12k
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113
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3
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178
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2
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70
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bcftools 1.4.1 call parameters
bcftools call snp written 9 days ago by cetin.m10 • updated 9 days ago by finswimmer8.8k
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86
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how to filter orphan breakends from a vcf?
vcf bcftools written 13 days ago by joannew0 • updated 11 days ago by Pierre Lindenbaum116k
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100
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5
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201
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1
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Concat VCFs with some shared samples
vcf concat bcftools written 8 weeks ago by QVINTVS_FABIVS_MAXIMVS2.2k • updated 20 days ago by Juan Manuel Berros80
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343
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2
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2
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1
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128
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1
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Annotate VCF to include dosage
vcf dosages bcftools written 21 months ago by Nicholas Mancuso50 • updated 4 weeks ago by zx87546.2k
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392
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1
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A strange problem with annotation of vcf file
genome annotation vcf bcftools gatk4 written 4 months ago by seta1.1k • updated 4 weeks ago by zx87546.2k
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182
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118
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1
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0
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1
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127
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I16 Info Tag
bcftools snp mpileup sequencing written 5 weeks ago by tbb210 • updated 5 weeks ago by finswimmer8.8k
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232
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1
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Error in bcftools view -bvcg command
vcf samtools bcftools snp written 7 weeks ago by hafiz.talhamalik40 • updated 6 weeks ago by WouterDeCoster35k
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158
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1
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1
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162
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samtools mpileup to bcftools mpileup
bcftools samtools snp written 7 weeks ago by Ric190 • updated 7 weeks ago by zx87546.2k
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10k
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How to extract sample id using bcftools or vcftools
vcf bcftools vcftools snp written 3.7 years ago by xinhui.wang150 • updated 8 weeks ago by zx87546.2k
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124
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1
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Bcftools merge sample order
vcf dna bcftools multisample htslib written 8 weeks ago by Chadi Saad50 • updated 8 weeks ago by paolo002100
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5
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182
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9 follow
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Get genotype GT from multi-sample VCF (per chromosome)
vcf bcftools genotype subset written 8 weeks ago by zx87546.2k • updated 8 weeks ago by Pierre Lindenbaum116k
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2
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Filter multisample vcf for denovo variant
vcf bcftools snp written 15 months ago by finswimmer8.8k • updated 8 weeks ago by Chadi Saad50
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148
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6
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256
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335
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6 follow
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1
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118
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bcftools not calling heterozygous sites
bcftools snp written 11 weeks ago by o.pens0 • updated 11 weeks ago by finswimmer8.8k
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146
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3
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153
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speed up bcftools annotate command
next-gen bcftools snp written 3 months ago by fenrir.sivar0 • updated 12 weeks ago by RamRS20k
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Install vcf2bed plugin for bcftools
installation vcf2bed bcftools written 3 months ago by marongiu.luigi350 • updated 3 months ago by John Marshall1.5k
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183
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