Showing: bcftoolsreset
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VCF file filtration
vcf wgs bcftools vcftools snp written 6 hours ago by jaafari.omid10
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109
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Duplicate variants in same position: bcftools
vcf bcftools written 6 days ago by Mbillah110 • updated 5 days ago by zx87546.5k
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filtering by POS in bcftools
software error bcftools written 7 days ago by 4galaxy7730 • updated 7 days ago by finswimmer9.8k
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Keep variants with 0% missing in VCF
vcf bcftools written 11 days ago by GabrielMontenegro500 • updated 11 days ago by Kevin Blighe37k
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7 follow
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bcftools query missense_variant SNPs from gnomad VCF files
bcftools vep written 17 days ago by Shicheng Guo7.4k • updated 17 days ago by Emily_Ensembl17k
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SNP calling using samtools
rnaseq samtools bcftools snp mpileup written 5 weeks ago by ankit4035hinsu10 • updated 22 days ago by Biostar ♦♦ 20
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How does bcftools isec do the intersection?
bcftools isec written 4 weeks ago by Hadi M10 • updated 4 weeks ago by finswimmer9.8k
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Variant calling by using samtools and bcftools
variant calling samtools bcftools written 4 weeks ago by hasani.iut640 • updated 4 weeks ago by ATpoint13k
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bcftools 1.4.1 call parameters
bcftools call snp written 5 weeks ago by cetin.m20 • updated 5 weeks ago by finswimmer9.8k
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how to filter orphan breakends from a vcf?
vcf bcftools written 6 weeks ago by joannew0 • updated 5 weeks ago by Pierre Lindenbaum116k
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5
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Concat VCFs with some shared samples
vcf concat bcftools written 3 months ago by QVINTVS_FABIVS_MAXIMVS2.2k • updated 7 weeks ago by Juan Manuel Berros80
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Annotate VCF to include dosage
vcf dosages bcftools written 22 months ago by Nicholas Mancuso50 • updated 8 weeks ago by zx87546.5k
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A strange problem with annotation of vcf file
genome annotation vcf bcftools gatk4 written 5 months ago by seta1.1k • updated 8 weeks ago by zx87546.5k
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I16 Info Tag
bcftools snp mpileup sequencing written 9 weeks ago by tbb2110 • updated 9 weeks ago by finswimmer9.8k
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Error in bcftools view -bvcg command
vcf samtools bcftools snp written 11 weeks ago by hafiz.talhamalik40 • updated 11 weeks ago by WouterDeCoster36k
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samtools mpileup to bcftools mpileup
bcftools samtools snp written 11 weeks ago by Ric190 • updated 11 weeks ago by zx87546.5k
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How to extract sample id using bcftools or vcftools
vcf bcftools vcftools snp written 3.8 years ago by xinhui.wang150 • updated 12 weeks ago by zx87546.5k
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Bcftools merge sample order
vcf dna bcftools multisample htslib written 12 weeks ago by Chadi Saad50 • updated 12 weeks ago by paolo002130
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9 follow
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Get genotype GT from multi-sample VCF (per chromosome)
vcf bcftools genotype subset written 12 weeks ago by zx87546.5k • updated 12 weeks ago by Pierre Lindenbaum116k
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Filter multisample vcf for denovo variant
vcf bcftools snp written 16 months ago by finswimmer9.8k • updated 12 weeks ago by Chadi Saad50
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