Showing: bcftoolsreset
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Best visual and interactive genotype matrix (VCF) exploration tool
vcf interactive bcftools visual written 16 days ago by William3.6k • updated 7 hours ago by willgilks130
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add undefined annotations from vcf files
bcftools written 9 hours ago by cmccabe100 • updated 9 hours ago by Pierre Lindenbaum89k
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How to filter vcf file on minimum genotype depth and quality for each sample
vcf bcftools written 7 months ago by William3.6k • updated 1 day ago by DragonDNA0
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43
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Error in plot-vcfstats
samtools bcftools written 5 days ago by bharata1803170
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Why is it absolutely necessary to filter a VCF?
vcf bcftools samtools vcftools filtering written 5 weeks ago by beausoleilmo60 • updated 5 weeks ago by mforde84440
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Bcftools equivalent of vcf-merge R?
vcf variation bcftools genotype written 10 months ago by CuriousGuy20 • updated 6 weeks ago by Biostar ♦♦ 10
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Update 'ID' column in VCF file using BCFtools annotate
bcftools vcftools written 10 weeks ago by mrxcm310 • updated 10 weeks ago by William3.6k
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bcftools isec: weird number of output file
vcf intersection bcftools result written 12 weeks ago by pingEde0 • updated 12 weeks ago by Dan Gaston6.5k
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bcftools soft filters (-s)
filters bcftools written 3 months ago by blur30 • updated 3 months ago by Pierre Lindenbaum89k
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181
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Bcftools magic string
bcftools written 3 months ago by blur30 • updated 3 months ago by Jorge Amigo9.4k
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How heterozygous GTs were defined in SNP calling vcf result
vcf wgs bcftools samtools snp written 3 months ago by bill-zt20 • updated 3 months ago by Gabriel R.1.8k
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No qual scores in VCF
vcf samtools bcftools written 3 months ago by Jon Binkley140
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194
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bcftools filter or bcftools isec to EXCLUDE dbSNP snps
filter bcftools vcftools isec dbsnp written 4 months ago by bgold040 • updated 4 months ago by harold.smith.tarheel3.5k
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News: Samtools/htslib/bcftools 1-3 released
samtools news bcftools htslib written 14 months ago by Devon Ryan62k • updated 5 months ago by xing0
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How to do consensus calling from bam files
samtools snps bcftools consensus calling written 5 months ago by AW250 • updated 5 months ago by Brice Sarver2.3k
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Optimizing sample extraction and concatenation from vcf files
genome vcf bcftools snp written 5 months ago by Theo10 • updated 5 months ago by Pierre Lindenbaum89k
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How to filter out duplicate records in a vcf with bcftools?
vcf bcftools written 5 months ago by vitor.aguiar10 • updated 5 months ago by Brice Sarver2.3k
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direct call of indels/snps with bcftools?
bcftools snp written 6 months ago by cristina_sabiers30 • updated 5 months ago by Biostar ♦♦ 10
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Converting Thousand genome BCF file into VCF with BCFtools
bcftools written 8 months ago by always_learning710 • updated 8 months ago by Jorge Amigo9.4k
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