Latest
News
Jobs
Tutorials
Forum
Tags
About
FAQ
Community
Planet
New Post
Log In
New Post
Latest
News
Jobs
Tutorials
Forum
Tags
Planet
Users
Log In
Sign Up
About
Limit : all time
all time
today
this week
this month
this year
0 results • Page
1 of 1
Sort: Rank
Rank
Views
Votes
Replies
Topic does not exist.
No posts found.
0 results • Page
1 of 1
Recent Votes
Answer: Can too high of a ChIPQC RiP% be indicative of insufficient stringency in peak c
Comment: RNAseq
Answer: Is Biopython a Package or Library?
Answer: Is Biopython a Package or Library?
A: Storing a gene expression matrix in a matrix.mtx
Comment: Clustering of short peptide sequences
Answer: Is anticancer action of HDAC inhibitors - cancer cells specific or it may cause
Recent Locations •
All
United States,
1 minute ago
United States,
1 minute ago
United States,
1 minute ago
United States,
2 minutes ago
Hungary,
3 minutes ago
Frankrike,
3 minutes ago
Germany,
5 minutes ago
Recent Awards •
All
Scholar
to
Renesh
★ 2.0k
Popular Question
to
halo22
▴ 250
Popular Question
to
bsmith030465
▴ 190
Teacher
to
Michael Dondrup
48k
Scholar
to
Jean-Karim Heriche
24k
Scholar
to
jared.andrews07
9.3k
Scholar
to
Bastien Hervé
4.9k
Recent Replies
Comment: htseq-count Error '_StepVector_Iterator_obj' object has no attribute 'next'
by
lieven.sterck
11k
I see, should be OK then I assume. I remember that we needed to use the version that was installed in the python libs of a specific python…
Comment: RNAseq
by
Kevin Blighe
72k
De nada amigo. No hay de que.
Comment: htseq-count Error '_StepVector_Iterator_obj' object has no attribute 'next'
by
Sara
• 0
I am using Python 3.7 (htseq-count specifies Python >=3.6)
Comment: Split fasta based on symbol and numeric position in header
by
Nick Scales
• 0
If possible in one step that would be great but I have already worked out how to do the second part of that with bedtools, for this I just …
Comment: Split fasta based on symbol and numeric position in header
by
Nick Scales
• 0
Okay this is super helpful thank you. My only need for the database is for it to have a fasta entry for each CAZyme so I can blast metageno…
Comment: RNAseq
by
mtavakoli4030
▴ 10
Thanks my friend
Comment: htseq-count Error '_StepVector_Iterator_obj' object has no attribute 'next'
by
lieven.sterck
11k
are you using the correct python version?
Comment: Split fasta based on symbol and numeric position in header
by
GenoMax
100k
Just to clarify you want it to keep track of the aa number and then create a new record for each ID separated by `+` by taking into account…
Comment: Split fasta based on symbol and numeric position in header
by
heskett
• 0
You need to explain what functions you want the database to have. if you use GTF format than this will be readable by alignment programs su…
Comment: Looking for a Whole Genome Sequencing GrCH38 Control group of roughly 250 sample
by
heskett
• 0
As mentioned, raw sequencing data of humans is privacy protected by law because it is identifiable. You need to either use a high-level sum…
Comment: Split fasta based on symbol and numeric position in header
by
Nick Scales
• 0
Thanks for the response - I tried this and it looks like it gives me the same output as the biopython script, which is the sequence and the…
Answer: Rare cell population in single cell ATAC-Seq
by
heskett
• 0
Yes this is possible. There's now likely hundreds of research papers that use single cell ATAC seq to do exactly this task, if you read may…
Answer: How to get GSE data into IGV
by
heskett
• 0
I'm not super familiar with GSE, but you should realize that IGV will readily accept BAMs, BEDs, and VCFs. If you want to view ChiP-seq pea…
Comment: Split fasta based on symbol and numeric position in header
by
Nick Scales
• 0
Thanks for getting back to me - I could see why that would be advantageous. Is there a tool that I could use if I went back a step and put …
Comment: Split fasta based on symbol and numeric position in header
by
GenoMax
100k
You may be able to do $ cut -d "+" -f1 your_file.fa >NZ_LR732827.1_2243__GH81(350-867) WGDWNVSWRMPQDGPGGQYMDVTSVQGSPY
Traffic: 2446 users visited in the last hour
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6