Showing: bedreset
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4
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12 follow
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Looking For A Way To Count Total Length Of Regions Of Bed File
bed written 6.4 years ago by Yunfei Li290 • updated 4 weeks ago by demolidd7740
8
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1
answer
1.2k
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1
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Consensus of multiple BED files
bedtools bed written 2.9 years ago by bruce.moran620 • updated 6 weeks ago by Biostar ♦♦ 20
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0
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83
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0
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1
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1
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91
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Modify reference fasta using bed file
fasta bed genome written 6 weeks ago by Rubal240 • updated 6 weeks ago by SMK1.8k
2
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1
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119
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1
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Pathogenic Variants in a Genomic interval
bed clinvar pathogenic genomic interval written 6 weeks ago by tylertibetli0 • updated 6 weeks ago by Emily_Ensembl18k
31
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6
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9.0k
views
17 follow
6
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How To Randomly Sample A Subset Of Lines From A Bed File
bed chip-seq written 5.8 years ago by bede.portz490 • updated 7 weeks ago by ATpoint21k
18
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3
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21k
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10 follow
3
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Any Method Of Converting Bigwig File Format Into Bed Format?
bed bigwig written 6.3 years ago by samwise.techno30 • updated 8 weeks ago by Samir170
2
votes
1
answer
160
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1
answer
bedtools slop set start to -1
gtf bed slop bedtools written 8 weeks ago by Medhat8.4k • updated 8 weeks ago by Alex Reynolds28k
3
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1
answer
123
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1
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List of tools that use BED as input
bed written 9 weeks ago by jnjeffrey210 • updated 9 weeks ago by Pierre Lindenbaum122k
2
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1
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132
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1
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1
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1
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178
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Graphing GC Bias in Sequence Capture
bed picard gcbias sequencing written 4 months ago by Jon1710 • updated 12 weeks ago by trausch1.4k
2
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1
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374
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1
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Is it possible to get .bed file of sequenced regions after NGS experiment?
bed ngs written 16 months ago by Adam20 • updated 12 weeks ago by Biostar ♦♦ 20
3
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1
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120
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1
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awk to organize bed file
bed awk written 3 months ago by flogin150 • updated 3 months ago by finswimmer12k
5
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1
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154
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1
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How to find total size of regions NOT in bigWig file
fasta bed genome written 3 months ago by Rubal240 • updated 3 months ago by ATpoint21k
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337
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0
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13
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1
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11k
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5 follow
1
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Converstion of BED with scores into bigWig
bed bigwig conversion scores written 4.1 years ago by Leszek4.0k • updated 3 months ago by msimmer92200
5
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2
answers
207
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2
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How does bedtools bamtobed calculate end position
bedtools bed bam written 3 months ago by timing0 • updated 3 months ago by John Marshall1.7k
3
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1
answer
247
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1
answer
converting Bed to Wig
overlap bed wig bigwig rtracklayer written 3 months ago by rahel1435030 • updated 3 months ago by Alex Reynolds28k
2
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2
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2
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Convert DiffBind output to standard BED or NarrowPeak format
bed diffbind chip-seq narrowpeak written 23 months ago by rbronste260 • updated 4 months ago by corinne_hutfilz0
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2
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248
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2
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Edit score column in bed file
bedtools bed written 4 months ago by fr100 • updated 4 months ago by Alex Reynolds28k
1
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3
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324
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3
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Convert indel list with [-/A] notation to VCF with adjacent base
vcf bed faidx convert written 7 months ago by Chris Miller21k • updated 4 months ago by or.yaacov0
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264
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GC Bias in Sequence Capture - Analysis & Quantification
bed sequence capture picard gcbias sequencing written 5 months ago by jnowacki70 • updated 4 months ago by Biostar ♦♦ 20
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0
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206
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Depth of coverage of Bed file regions?
bedtools bed coverage genome written 5 months ago by Jon1710 • updated 5 months ago by h.mon27k
3
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2
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176
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2
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Modify BED with poliregions
bed bash awk written 5 months ago by v82masae140 • updated 5 months ago by Pierre Lindenbaum122k
5
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1
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250
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7 follow
1
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8
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1
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373
views
7 follow
1
answer
11
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2
answers
4.5k
views
5 follow
2
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How to subset a bed or gtf file to some genes of interest?
gtf bed gene genome written 4.4 years ago by cyril-cros890 • updated 5 months ago by dimitrischat70
6
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1
answer
503
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6 follow
1
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