Showing: bedreset
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5
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1
answer
153
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6 follow
1
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bam to vcf to .bed
vcf bed bam written 5 days ago by genomics Newbie10 • updated 4 days ago by finswimmer3.6k
30
votes
4
answers
21k
views
16 follow
4
answers
Converting Bam To Bedgraph For Viewing On Ucsc?
bedtools bed bam genome-browser ucsc written 5.4 years ago by user770 • updated 8 days ago by ATpoint5.5k
0
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1
answer
117
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1
answer
1
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2
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106
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2
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comparing 2 long BED files in R in an efficient way
vcf bed written 15 days ago by Bogdan530 • updated 15 days ago by Devon Ryan81k
21
votes
5
answers
15k
views
13 follow
5
answers
How Do I Convert Fa Files To Bed Format?
fasta bed written 6.6 years ago by Keziah70 • updated 15 days ago by noahaus10
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0
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105
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0
answers
3
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1
answer
69
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1
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8
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1
answer
981
views
6 follow
1
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Editing Bed file
bed sequence chip-seq alignment written 17 months ago by dimitrischat50 • updated 19 days ago by roberta.cracco0
15
votes
3
answers
191
views
6 follow
3
answers
Obtaining rsIDs using BiomaRt or linux
R biomart snps rsid bed written 20 days ago by camerond10 • updated 20 days ago by Pierre Lindenbaum110k
1
vote
1
answer
118
views
1
answer
4
votes
2
answers
1.9k
views
2
answers
Annotating/Finding "NNNNNN" scaffold gaps in genome assembly
bed ngs scaffolding assembly written 3.0 years ago by Adrian Pelin2.1k • updated 4 weeks ago by michael0
4
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2
answers
181
views
2
answers
Combining multiple bedfiles
bedtools bed written 5 weeks ago by christacaggiano20 • updated 5 weeks ago by finswimmer3.6k
6
votes
1
answer
197
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1
answer
1
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2
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1.6k
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2
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Converting from BED to SAF/GFF
saf bed gff featurecount written 19 months ago by ccag30 • updated 5 weeks ago by ATpoint5.5k
2
votes
1
answer
202
views
1
answer
How do I filter out transcripts with less than two exons
bedtools bed gff galaxy written 6 weeks ago by alex.v.nesta0 • updated 6 weeks ago by cpad01127.6k
0
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0
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178
views
0
answers
3
votes
1
answer
188
views
1
answer
cwlexec and cwltool not interpreting baseCommand the same way
bed cwl written 7 weeks ago by drkennetz270 • updated 7 weeks ago by Michael R. Crusoe1.0k
3
votes
2
answers
700
views
2
answers
How to extend bed intervals to a uniform size?
bedtools bed genome written 11 months ago by bsb43900 • updated 7 weeks ago by Biostar ♦♦ 20
1
vote
0
answers
159
views
0
answers
2
votes
0
answers
227
views
0
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How can I convert from bed to bed12 format?
bed bed12 written 10 weeks ago by Sharon340 • updated 10 weeks ago by Hussain Ather860
5
votes
1
answer
167
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1
answer
32
votes
3
answers
12k
views
15 follow
3
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How Do You Calculate If Two Sets Of Genomic Regions Overlap Significantly?
bed chip-seq coverage statistics written 7.4 years ago by Stew1.4k • updated 11 weeks ago by Hmd10
2
votes
1
answer
156
views
1
answer
add gene names in bed file
bed annotations written 11 weeks ago by Tania120 • updated 11 weeks ago by Alex Reynolds24k
5
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2
answers
148
views
2
answers
Reconstruct bed file out of columns
R bed script columns python written 11 weeks ago by dzisis198620 • updated 11 weeks ago by zx87544.6k
2
votes
1
answer
148
views
1
answer
Is it possible to get .bed file of sequenced regions after NGS experiment?
bed ngs written 12 weeks ago by Adam10 • updated 12 weeks ago by Alex Reynolds24k
0
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119
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0
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4
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2
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222
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2
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3
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1
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4.8k
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1
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Bed File Bedpe Format
bedtools bed bam conversion written 7.0 years ago by Assa Yeroslaviz1.1k • updated 3 months ago by Biostar ♦♦ 20
3
votes
2
answers
293
views
2
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plot a bedgraph
bed bedgraph rna-seq plot written 3 months ago by sacha1.3k
1
vote
1
answer
182
views
1
answer
Excluding intervals with repeats
bed repeats masking written 3 months ago by rbronste170
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