Showing: bedreset
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CNVkit GRCh38 tumor-normal pair
wes tcga grch38 cnv bed written 16 days ago by plink_985740 • updated 13 days ago by Eric T.1.7k
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GFF3 to 12-column BED
gff3 bed written 10 months ago by New2R10 • updated 18 days ago by t_pod0
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overlap BED files, but account for region name
overlap bed bedtools written 6 weeks ago by igor4.4k • updated 6 weeks ago by Chris Miller18k
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UCSC genome viewer for non-model organism
chip-seq alignment visualization bed written 7 weeks ago by anupriyaverma1408100 • updated 7 weeks ago by Pierre Lindenbaum96k
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How To Sort Bed Format File
bed written 4.4 years ago by lyz10302012260 • updated 8 weeks ago by rjactonspsfcf10
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How to make bed file for existing bim and fam file
fam bed bim plink written 8 weeks ago by Mazza10 • updated 8 weeks ago by Maxime Lamontagne1.8k
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bed format, START always bigger than END, no matter which strand?
bed bowtie written 9 weeks ago by bxia90 • updated 9 weeks ago by Alex Reynolds19k
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Batch Fetching Fasta Sequences From Bed File
fasta bed written 6.3 years ago by Carl80 • updated 11 weeks ago by Maximilian Haeussler1.3k
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Preparing a .bed for Homer annotation
homer annotatepeaks bed written 20 months ago by giroudpaul50 • updated 11 weeks ago by jiab10
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How to extract sequence message from SAM?
bed sam sequencing written 11 weeks ago by Jeason Rad30 • updated 11 weeks ago by Pierre Lindenbaum96k
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Output bed file region sizes as histogram
bedtools bed bedops histogram written 3 months ago by mmmmcandrew60 • updated 3 months ago by Alex Reynolds19k
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Convert cds .fa to bed
fasta ensembl bed cds ucsc written 3 months ago by bioinfo870
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Generate bed file containing regions with no bigwig coverage
bed bigwig written 3 months ago by mmmmcandrew60 • updated 3 months ago by Pierre Lindenbaum96k
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Getting a gene list fom eCLIP bigBED file
bigbed bed eclip galaxy encode written 3 months ago by o.hickman10 • updated 3 months ago by Alex Reynolds19k
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compare peaks in a gene list (coordinates)
gene bed peaks chip-seq written 3 months ago by Lila M 280 • updated 3 months ago by vchris_ngs3.6k
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compute coverage with file.bam and bed : bedtools empty output
bedtools bed bam coverage written 3 months ago by noeD50 • updated 3 months ago by Devon Ryan69k
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convert bed file to fasta file
fasta bed rna-seq conversion written 3.0 years ago by hana140 • updated 3 months ago by Alex Reynolds19k
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Finding minima from bigwig in specific regions from bed file
bed bigwig written 3 months ago by mmmmcandrew60 • updated 3 months ago by Alex Reynolds19k
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