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bedgraph.sorted or wig to .cov files?
bedgraph.sorted wig coverage bedgraph written 4 months ago by arshkhaira10 • updated 4 months ago by Shalu Jhanwar470
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What are these files?
geo bed rnaseq bedgraph written 5 months ago by ebs1524210 • updated 5 months ago by jared.andrews077.9k
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Calculate correlations between ChipSeq data sets
peaks chipseq macs2 correlation bedgraph written 8 months ago by Assa Yeroslaviz1.4k • updated 8 months ago by Rory Stark880
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sorting for bedtools genomecov doesn't work properly
bedtools bedpe sort rna-seq bedgraph written 8 months ago by Assa Yeroslaviz1.4k • updated 8 months ago by Kevin Blighe67k
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variableStep vs fixedStep for range formats
bedgraph ucsc bigwig formats range written 2.2 years ago by m98260 • updated 9 months ago by Biostar ♦♦ 20
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GEO database - how to use their bedgraph files
bedgraph rna-seq written 13 months ago by Suicyte10 • updated 13 months ago by Luis Nassar420
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Overlapping regions in a BedGraph file
gro-seq bedgraph chip-seq deeptools written 4.9 years ago by Sam90 • updated 18 months ago by Simply Bioinformatics170
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Generating a bedgraph from a scored bed file
genome bedtools chip-seq coverage bedgraph written 5.7 years ago by Matt Corley40 • updated 20 months ago by Biostar ♦♦ 20
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Seqmonk: Bedgraph as input ? (EPIC methylation array data)
seqmonk bedgraph probe design methylation written 23 months ago by Ankit150 • updated 21 months ago by Charles Warden7.9k
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Transform Bedgraph counts into Gene Counts (DESeq2 input)
bedgraph gene counts counts written 21 months ago by LuisNagano70 • updated 21 months ago by gocougs20
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Reformating bedGraph files in shell script
bedgraph ucsc bigwig chr awk written 2.2 years ago by m98260 • updated 2.1 years ago by Biostar ♦♦ 20
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BigWig library for Java
bedgraph java bigwig written 6.0 years ago by bow790 • updated 2.1 years ago by holgerbrandl30
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Output bedGraph from genomeCoverageBed is missing "chr"
bedgraph bigwig genomecoveragebed rna-seq ucsc written 2.2 years ago by m98260 • updated 2.2 years ago by RamRS30k
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Stranded RNA-seq data visualization in UCSC
bedgraph visualization rna-seq stranded written 2.3 years ago by marina.v.yurieva520 • updated 2.3 years ago by Rob4.5k
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"olambda_treat_afterfiting_all" output file from MACS
macs bedgraph output written 6.0 years ago by akivab2100 • updated 2.3 years ago by Biostar ♦♦ 20
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How to extrach gene names and peaks from BedGraph or BigWig files
peak bedgraph chip-seq bigwig written 2.6 years ago by hkarakurt100 • updated 2.6 years ago by Devon Ryan97k
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plot a bedgraph
bed bedgraph rna-seq plot written 2.7 years ago by sacha2.0k
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How to merge bedGraph records which are next to each other and have the same score?
bedgraph written 3.3 years ago by James Ashmore3.0k • updated 3.3 years ago by geek_y11k
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