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bedgraph.sorted or wig to .cov files?
bedgraph.sorted wig coverage bedgraph written 4 weeks ago by arshkhaira10 • updated 4 weeks ago by Shalu Jhanwar400
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What are these files?
geo bed rnaseq bedgraph written 7 weeks ago by ebs1524210 • updated 7 weeks ago by jared.andrews076.4k
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Calculate correlations between ChipSeq data sets
peaks chipseq macs2 correlation bedgraph written 5 months ago by Assa Yeroslaviz1.4k • updated 5 months ago by Rory Stark730
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sorting for bedtools genomecov doesn't work properly
bedtools bedpe sort rna-seq bedgraph written 5 months ago by Assa Yeroslaviz1.4k • updated 5 months ago by Kevin Blighe63k
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variableStep vs fixedStep for range formats
bedgraph ucsc bigwig formats range written 23 months ago by m93240 • updated 6 months ago by Biostar ♦♦ 20
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GEO database - how to use their bedgraph files
bedgraph rna-seq written 9 months ago by Suicyte10 • updated 9 months ago by Luis Nassar390
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Overlapping regions in a BedGraph file
gro-seq bedgraph chip-seq deeptools written 4.6 years ago by Sam90 • updated 14 months ago by Simply Bioinformatics170
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Generating a bedgraph from a scored bed file
genome bedtools chip-seq coverage bedgraph written 5.4 years ago by Matt Corley40 • updated 16 months ago by Biostar ♦♦ 20
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Seqmonk: Bedgraph as input ? (EPIC methylation array data)
seqmonk bedgraph probe design methylation written 19 months ago by Ankit140 • updated 18 months ago by Charles Warden7.8k
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Transform Bedgraph counts into Gene Counts (DESeq2 input)
bedgraph gene counts counts written 18 months ago by LuisNagano40 • updated 18 months ago by gocougs20
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Reformating bedGraph files in shell script
bedgraph ucsc bigwig chr awk written 23 months ago by m93240 • updated 21 months ago by Biostar ♦♦ 20
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BigWig library for Java
bedgraph java bigwig written 5.8 years ago by bow790 • updated 22 months ago by holgerbrandl30
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Output bedGraph from genomeCoverageBed is missing "chr"
bedgraph bigwig genomecoveragebed rna-seq ucsc written 23 months ago by m93240 • updated 23 months ago by RamRS28k
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Stranded RNA-seq data visualization in UCSC
bedgraph visualization rna-seq stranded written 2.0 years ago by marina.v.yurieva520 • updated 2.0 years ago by Rob4.1k
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"olambda_treat_afterfiting_all" output file from MACS
macs bedgraph output written 5.7 years ago by akivab2100 • updated 2.0 years ago by Biostar ♦♦ 20
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How to extrach gene names and peaks from BedGraph or BigWig files
peak bedgraph chip-seq bigwig written 2.3 years ago by hkarakurt100 • updated 2.3 years ago by Devon Ryan96k
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plot a bedgraph
bed bedgraph rna-seq plot written 2.4 years ago by sacha1.9k
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How to merge bedGraph records which are next to each other and have the same score?
bedgraph written 3.0 years ago by James Ashmore3.0k • updated 3.0 years ago by geek_y11k
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Visualising BedGraph files on UCSC [custom tracks]
genome bedgraph visualisation ucsc written 3.2 years ago by anu014180 • updated 3.2 years ago by Arup Ghosh2.7k
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