Showing: bedgraphreset
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Overlapping regions in a BedGraph file
gro-seq bedgraph chip-seq deeptools written 3.6 years ago by Sam70 • updated 7 weeks ago by Simply Bioinformatics150
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Generating a bedgraph from a scored bed file
genome bedtools chip-seq coverage bedgraph written 4.3 years ago by Matt Corley40 • updated 3 months ago by Biostar ♦♦ 20
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Seqmonk: Bedgraph as input ? (EPIC methylation array data)
seqmonk bedgraph probe design methylation written 6 months ago by Ankit110 • updated 5 months ago by Charles Warden7.0k
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Transform Bedgraph counts into Gene Counts (DESeq2 input)
bedgraph gene counts counts written 5 months ago by LuisNagano10 • updated 5 months ago by gocougs20
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Reformating bedGraph files in shell script
bedgraph ucsc bigwig chr awk written 10 months ago by m93150 • updated 8 months ago by Biostar ♦♦ 20
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BigWig library for Java
bedgraph java bigwig written 4.7 years ago by bow790 • updated 9 months ago by holgerbrandl30
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variableStep vs fixedStep for range formats
bedgraph ucsc bigwig formats range written 10 months ago by m93150 • updated 10 months ago by RamRS23k
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Output bedGraph from genomeCoverageBed is missing "chr"
bedgraph bigwig genomecoveragebed rna-seq ucsc written 10 months ago by m93150 • updated 10 months ago by RamRS23k
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Stranded RNA-seq data visualization in UCSC
bedgraph visualization rna-seq stranded written 11 months ago by marina.v.yurieva480 • updated 11 months ago by Rob3.4k
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"olambda_treat_afterfiting_all" output file from MACS
macs bedgraph output written 4.6 years ago by akivab2100 • updated 11 months ago by Biostar ♦♦ 20
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How to extrach gene names and peaks from BedGraph or BigWig files
peak bedgraph chip-seq bigwig written 15 months ago by hkarakurt60 • updated 15 months ago by Devon Ryan91k
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plot a bedgraph
bed bedgraph rna-seq plot written 16 months ago by sacha1.8k
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How to merge bedGraph records which are next to each other and have the same score?
bedgraph written 23 months ago by James Ashmore2.6k • updated 23 months ago by geek_y9.8k
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Visualising BedGraph files on UCSC [custom tracks]
genome bedgraph visualisation ucsc written 2.1 years ago by anu014160 • updated 2.1 years ago by arup1.5k
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Difference between 'bedgraph' and 'bw' files
bedgraph bw written 2.4 years ago by biotech540 • updated 2.4 years ago by igor8.0k
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How to create a bedGraph file for broadPeak peak caller?
bedgraph broadpeak chip-seq peak calling written 3.5 years ago by mrs.hope10 • updated 2.6 years ago by 5694977350
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Relationship of bedGraph to wig.
bedgraph wiggle wig chip-seq written 2.9 years ago by ariel.balter140 • updated 2.9 years ago by Devon Ryan91k
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Two UCSC bedgraph tracks next to each other
custom track ucsc bedgraph written 3.9 years ago by kevin.wyatt.mcmahon0 • updated 3.3 years ago by Chirag Nepal2.2k
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Is there a simple way to get the max coverage of a bedgraph file in python?
python bedgraph written 3.3 years ago by rioualen380 • updated 3.3 years ago by Alex Reynolds28k
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