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bedgraph.sorted or wig to .cov files?
bedgraph.sorted wig coverage bedgraph written 7 months ago by arshkhaira10 • updated 7 months ago by Shalu Jhanwar490
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What are these files?
geo bed rnaseq bedgraph written 8 months ago by ebs1524210 • updated 8 months ago by jared.andrews078.7k
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Calculate correlations between ChipSeq data sets
peaks chipseq macs2 correlation bedgraph written 12 months ago by Assa Yeroslaviz1.4k • updated 12 months ago by Rory Stark920
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sorting for bedtools genomecov doesn't work properly
bedtools bedpe sort rna-seq bedgraph written 12 months ago by Assa Yeroslaviz1.4k • updated 12 months ago by Kevin Blighe71k
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variableStep vs fixedStep for range formats
bedgraph ucsc bigwig formats range written 2.5 years ago by m98290 • updated 13 months ago by Biostar ♦♦ 20
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GEO database - how to use their bedgraph files
bedgraph rna-seq written 16 months ago by Suicyte10 • updated 16 months ago by Luis Nassar420
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Overlapping regions in a BedGraph file
gro-seq bedgraph chip-seq deeptools written 5.2 years ago by Sam90 • updated 21 months ago by Simply Bioinformatics180
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Generating a bedgraph from a scored bed file
genome bedtools chip-seq coverage bedgraph written 6.0 years ago by Matt Corley40 • updated 23 months ago by Biostar ♦♦ 20
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Seqmonk: Bedgraph as input ? (EPIC methylation array data)
seqmonk bedgraph probe design methylation written 2.2 years ago by Ankit170 • updated 2.1 years ago by Charles Warden8.0k
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Transform Bedgraph counts into Gene Counts (DESeq2 input)
bedgraph gene counts counts written 2.1 years ago by LuisNagano80 • updated 2.1 years ago by gocougs20
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Reformating bedGraph files in shell script
bedgraph ucsc bigwig chr awk written 2.5 years ago by m98290 • updated 2.3 years ago by Biostar ♦♦ 20
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BigWig library for Java
bedgraph java bigwig written 6.3 years ago by bow790 • updated 2.4 years ago by holgerbrandl30
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Output bedGraph from genomeCoverageBed is missing "chr"
bedgraph bigwig genomecoveragebed rna-seq ucsc written 2.5 years ago by m98290 • updated 2.5 years ago by Ram32k
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Stranded RNA-seq data visualization in UCSC
bedgraph visualization rna-seq stranded written 2.6 years ago by marina.v.yurieva550 • updated 2.6 years ago by Rob4.6k
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"olambda_treat_afterfiting_all" output file from MACS
macs bedgraph output written 6.3 years ago by akivab2100 • updated 2.6 years ago by Biostar ♦♦ 20
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How to extrach gene names and peaks from BedGraph or BigWig files
peak bedgraph chip-seq bigwig written 2.9 years ago by hkarakurt110 • updated 2.9 years ago by Devon Ryan98k
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