Showing: bedtoolsreset
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Read depth interval comparison
read depth bed bedops bam bedtools written 6 days ago by rbronste200 • updated 6 days ago by Pierre Lindenbaum114k
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Extending BED intervals
bedtools bed bedops interval written 8 days ago by rbronste200 • updated 8 days ago by Alex Reynolds26k
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find coverage of specific exomes from a bam file
bedtools genomecov bam coverage bed written 13 days ago by lait120 • updated 13 days ago by Pierre Lindenbaum114k
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coverage of a SNP site?
bedtools ngs ase coverage snp written 16 days ago by Susmita Mandal0 • updated 16 days ago by Kevin Blighe32k
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Using BedTools to look at unique bed intervals between two files
bedtools written 22 days ago by a.rex170 • updated 22 days ago by Alex Reynolds26k
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overlap BED files, but account for region name
overlap bed bedtools written 17 months ago by igor7.0k • updated 25 days ago by Biostar ♦♦ 20
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Extracting Flanking Regions using Biopython
bedtools biopython written 5 weeks ago by LindoNkambule0 • updated 5 weeks ago by jrj.healey8.8k
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Bedtools intersect alternatives available
bedtools written 5 weeks ago by Jeffin Rockey770 • updated 5 weeks ago by Alex Reynolds26k
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Error using bedtools "intersect" command
software error bedtools written 5 weeks ago by hila0 • updated 5 weeks ago by Pierre Lindenbaum114k
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How to get regions with mapped reads
bedtools bed file rna-seq bam file written 6 weeks ago by nanoide10 • updated 6 weeks ago by RamRS19k
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Bedtools Intersect with files containing some alternative information
bedtools written 3.6 years ago by christylynn0020 • updated 6 weeks ago by Biostar ♦♦ 20
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Extract Only Paired-End Reads That Map A Specific Interval
bedtools extraction written 6.2 years ago by Nicolas Rosewick6.9k • updated 6 weeks ago by pnatsidis0
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Bedtools Genomecoveragebed Usage : How To Create A Genome File?
bedtools written 5.6 years ago by komal.rathi3.3k • updated 7 weeks ago by Medhat8.0k
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Is BED file generated by bametobed sorted ?
bedtools ngs bamtobed coverage sequencing written 7 weeks ago by pacman50 • updated 7 weeks ago by Alex Reynolds26k
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Single Cell Sequencing Quality
bedtools samtools single cell written 7 weeks ago by hshah20 • updated 7 weeks ago by RamRS19k
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i cant sort bed file. Error in bedtools merge.
bedtools next-gen written 2.8 years ago by unique37950 • updated 8 weeks ago by RamRS19k
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bedtools intersect issue
bedtools intersect bed file written 11 weeks ago by elisheva70 • updated 10 weeks ago by Biostar ♦♦ 20
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Merge intervals between but NOT within 2 BED files
bedtools overlap merge bedops written 10 weeks ago by Anand Rao160 • updated 10 weeks ago by Alex Reynolds26k
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bedtools closest - result for only the first query
bedtools software error closest bed written 8 months ago by yjyj0 • updated 11 weeks ago by Biostar ♦♦ 20
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5 follow
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