Showing: bedtoolsreset
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Bedtools Flank Unexpected Behavior
bedtools written 8 days ago by gtasource10 • updated 8 days ago by ATpoint5.5k
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16 follow
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Converting Bam To Bedgraph For Viewing On Ucsc?
bedtools bed bam genome-browser ucsc written 5.4 years ago by user770 • updated 8 days ago by ATpoint5.5k
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Combining two databases in gtf file, bedtools gives wierd result
bedtools gtf noncode written 17 days ago by marina.v.yurieva430 • updated 9 days ago by Biostar ♦♦ 20
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How to filter/edit some BED lines.
bedtools linux written 18 days ago by star60 • updated 18 days ago by Pierre Lindenbaum110k
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nonamecheck not working in bedtools coverage
bedtools written 19 days ago by roalva170 • updated 19 days ago by Ram15k
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137
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Find consensus overlap between many bed files
genome bedtools intersect overlap written 20 days ago by goodez240 • updated 19 days ago by Alex Reynolds24k
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205
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6 follow
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Expanding Genomic Coordinates Using Bedtools
bedtools bed tools genomc bed file written 4 weeks ago by gtasource10 • updated 20 days ago by Aaronquinlan10k
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Intersect counts with fragment regions
bedtools R intersect ranges readcounts written 27 days ago by dzisis198620 • updated 26 days ago by Alex Reynolds24k
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Combining multiple bedfiles
bedtools bed written 5 weeks ago by christacaggiano20 • updated 5 weeks ago by finswimmer3.6k
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Bedtools intersect with index
bedtools written 5 weeks ago by landscape95130 • updated 5 weeks ago by Alex Reynolds24k
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149
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130
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Mimic input file with string
bedtools written 6 weeks ago by Bastien HervĂ©1.5k • updated 6 weeks ago by Pierre Lindenbaum110k
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How do I filter out transcripts with less than two exons
bedtools bed gff galaxy written 6 weeks ago by alex.v.nesta0 • updated 6 weeks ago by cpad01127.6k
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Difference in chromosome numbering
bedtools R next-gen fasta written 7 weeks ago by banerjeeshayantan50 • updated 7 weeks ago by zx87544.6k
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How to extend bed intervals to a uniform size?
bedtools bed genome written 11 months ago by bsb43900 • updated 7 weeks ago by Biostar ♦♦ 20
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167
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5 follow
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getting a combination of all predicted genes
bedtools gff written 8 weeks ago by bitpir70 • updated 7 weeks ago by Alex Reynolds24k
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Unable to intersect BAM file with bedtools
bedtools written 10 weeks ago by nicola.licheri0 • updated 10 weeks ago by Alex Reynolds24k
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203
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5 follow
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Query Genes within regions
bedtools R biomart query written 10 weeks ago by v82masae60 • updated 10 weeks ago by Mike Smith820
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167
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bedcoverage output while looking for missing genes
bedtools written 3 months ago by David80 • updated 3 months ago by Kevin Blighe24k
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