Showing: bedtoolsreset
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extracting strand information from BAM to BED
bedtools bam files written 4 days ago by amitpande740 • updated 4 days ago by ATpoint22k
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Converting Bam To Bedgraph For Viewing On Ucsc?
bedtools bed bam genome-browser ucsc written 6.6 years ago by user810 • updated 18 days ago by ATpoint22k
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Distribution of mapped reads
bedtools alignment small rnaseq rna-seq mirna written 24 days ago by ilovesuperheroes19930 • updated 24 days ago by Grinch70
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Bedtools fisher result
genome bedtools fisher written 25 days ago by sxf7100
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Paired-end reads that span a position in an assembly
bedtools genome paired-end assembly written 4 weeks ago by saladi130 • updated 4 weeks ago by Pierre Lindenbaum122k
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how to extract unique and the first shared exon in a given gene?
bedtools R groupby linux dyplr written 6 weeks ago by star190 • updated 6 weeks ago by Zhenyu Zhang260
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Genome coverage within specified regions
bedtools genomecov coverage written 6 weeks ago by ilovesuperheroes19930 • updated 6 weeks ago by ATpoint22k
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output of bedtools bamtofastq are empty files
bamtofastq bedtools fastq bam samtools written 4.4 years ago by szuszmok40 • updated 6 weeks ago by gohchengang19940
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Getting different results from bedtools and samtools
bedtools samtools bamfile rna-seq written 7 weeks ago by wstla270 • updated 7 weeks ago by Pierre Lindenbaum122k
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Consensus of multiple BED files
bedtools bed written 3.0 years ago by bruce.moran650 • updated 9 weeks ago by Biostar ♦♦ 20
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Bedtools Intersect related
bedtools chip-seq tool bedfiles written 9 weeks ago by chaudharyc610 • updated 9 weeks ago by 2nelly170
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Matching mutation in bed files to their corresponding bam files
bedtools rna-seq written 10 weeks ago by prernagoel040 • updated 10 weeks ago by bari.ballew190
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bedtools slop set start to -1
gtf bed slop bedtools written 11 weeks ago by Medhat8.4k • updated 11 weeks ago by Alex Reynolds28k
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Bedtools Coverage 1x Max Issue
bedtools exome depth written 2.3 years ago by kerriganblake0 • updated 3 months ago by melissawongukm10
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trouble with bedtools intersect and coverage
software error genome next-gen bedtools sequencing written 3 months ago by bio123456710 • updated 3 months ago by Vitis2.2k
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Bedtools shift in a defined chromosomal position
bedtools written 3 months ago by ste.lu50 • updated 3 months ago by Pierre Lindenbaum122k
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bedtools sort -faidx in CWL
bedtools cwl sort written 3 months ago by dami0
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Combine .bed files and keep columns / headers
bedtools bedops bedmap written 3 months ago by fr100 • updated 3 months ago by ATpoint22k
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bedtools multicov displays only the last BED feature
bedtools multicov written 2.1 years ago by ThePresident130 • updated 3 months ago by rania.hamdy10
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Question about Bedtools intersect: allows for multiple matches?
bedtools pybedtools written 4 months ago by fr100 • updated 4 months ago by jared.andrews073.1k
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How does bedtools bamtobed calculate end position
bedtools bed bam written 4 months ago by timing10 • updated 4 months ago by John Marshall1.7k
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