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<prev • 618 results • page 2 of 21 • next >
1
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1
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183
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1
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Bedtools to make a bed file for promoter
bedtools written 4 months ago by pixie@bioinfo • 1.4k • updated 4 months ago by seidel ♦ 7.4k
2
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2
answers
2.2k
views
2
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problem with bedtools complement: how to extract strand information?
bedtools written 6.3 years ago by biolab • 1.2k • updated 5 months ago by deepali.kundnani • 0
2
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1
answer
204
views
1
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Does bedtools intersect output overlaps with isoforms?
bedtools isoforms written 5 months ago by kmkdesilva • 90 • updated 5 months ago by Kevin Blighe ♦ 71k
0
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1
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159
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1
answer
Extract non-repetitive DNA sequence
bedtools written 5 months ago by huiyus97 • 0 • updated 5 months ago by JC ♦ 12k
4
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3
answers
254
views
5 follow
3
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bedtools sort doesn't properly sort
bedtools written 5 months ago by vctrm67 • 20 • updated 5 months ago by Jorge Amigo ♦ 12k
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2
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193
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2
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Bedtools merge messing chromosome start - end points
genome bedtools merge merge bedtools written 5 months ago by nitinra • 10 • updated 5 months ago by Jorge Amigo ♦ 12k
8
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1
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5.0k
views
1
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Bedtools Intersectbed
bedtools intersect coverage written 9.3 years ago by Ian ♦ 5.7k • updated 5 months ago by Biostar ♦♦ 20
3
votes
1
answer
266
views
1
answer
Plotting large file size of bedtools genomecov output
bedtools genomecov genome coverage depth written 5 months ago by nitinra • 10 • updated 5 months ago by Pierre Lindenbaum ♦ 134k
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0
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164
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0
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bedtools closest default?
bedtools written 5 months ago by vctrm67 • 20
1
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1
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236
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1
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Bedtools - can I operate two operations same time, and on the same database?
bedtools written 5 months ago by Waly • 0 • updated 5 months ago by Alex Reynolds ♦ 31k
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0
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252
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0
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How can I add sequences to my BED file?
bedtools bed written 6 months ago by saygingulec • 0
0
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2
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253
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2
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Comparing peaks between multiple samples
bedtools chip-seq written 6 months ago by emilyprice16 • 20 • updated 6 months ago by Rory Stark • 920
0
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0
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534
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0
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About calculating the GC content in a sliding window
bedtools gccontent written 6 months ago by jon.brate • 250
2
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2
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243
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2
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Extract exact match from bed files
bedtools bed bedops written 6 months ago by brown.annaleigh • 10 • updated 6 months ago by Alex Reynolds ♦ 31k
1
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222
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0
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How to get similar naming protein seqs and gff from downloaded genome files
genome bedtools gff unix written 6 months ago by T_18 • 40
3
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0
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340
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0
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Tutorial: Real World BEDtools. Practical Examples for Variant Filtering and Gene Annotations
bedtools bed tutorial lesson video written 7 months ago by sdsubaru33 • 30
0
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0
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291
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0
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To remove variants that encode for PE-PPE proteins from .vcf file
bedtools annovar vcftools written 7 months ago by kumari.indu31 • 0
0
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2
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2.1k
views
2
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Filtering reads aligned to specific chromosome
bamtofastq bedtools bam sam snp written 5.0 years ago by signauncreal • 0 • updated 7 months ago by Biostar ♦♦ 20
0
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0
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311
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0
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intersection of two GFFs
bedtools gff intersect written 8 months ago by BioDH • 0 • updated 7 months ago by Biostar ♦♦ 20
1
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0
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171
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0
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Intersecting unbalanced BED files, normalizing for one
bedtools bedops written 7 months ago by LacquerHed • 0
0
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0
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175
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0
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Understanding BEDtools summary output
bedtools bed summary man written 7 months ago by brismiller • 40
0
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0
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219
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0
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find co-ordinates of overlapping fasta sequences
bedtools fasta micrornas written 8 months ago by sg197 • 20
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0
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220
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0
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Creating a bed file from a de novo fasta file
bedtools assembly metagenomics written 8 months ago by c.e.chong • 40
0
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0
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210
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0
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Question about the parameter -fs in bedtools.
bedtools written 8 months ago by Spencer • 20
0
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2
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1.6k
views
2
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bedtools closest - result for only the first query
bedtools software error closest bed written 3.0 years ago by yjyj • 0 • updated 8 months ago by Biostar ♦♦ 20
0
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1
answer
780
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1
answer
Bedtools intersect with header file
bedtools written 15 months ago by irfanwustl • 20 • updated 8 months ago by Alex Reynolds ♦ 31k
4
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3
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390
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3
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Bedtools intersect not reporting all overlaps
bedtools bedtools intersect gff artemis bed written 8 months ago by jamie.pike • 60
1
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1
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252
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1
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compute genome coverage from specific bam contig
bedtools samtools written 8 months ago by regue.hadrien • 30
0
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0
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434
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0
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Putting bedtools in the path
bedtools bedops samtools written 8 months ago by A • 3.9k
11
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3
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2.9k
views
5 follow
3
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Find consensus overlap between many bed files
genome bedtools intersect overlap written 2.7 years ago by goodez • 490 • updated 8 months ago by Biostar ♦♦ 20
<prev • 618 results • page 2 of 21 • next >
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