Showing: bedtoolsreset
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ChIP-Seq density plot of the TSS regions?
bedtools deeptools ase chip-seq igv written 4 months ago by Susmita Mandal40 • updated 4 months ago by i.sudbery4.8k
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Customising bedtools shuffle command
bedtools enhancers shuffle transcription factors written 4 months ago by kdc1530 • updated 4 months ago by geek_y9.7k
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bedtools subtract still overlaps by 1bp?
bedtools subtract slop getfasta written 4 months ago by Anand Rao210 • updated 4 months ago by finswimmer11k
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Merging peak files for unionized set
bedtools next-gen atac-seq written 4 months ago by aam4580 • updated 4 months ago by trausch1.3k
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Find the 3' utrs, 5'utrs and their counts from bam files
bedtools bed bam utr ucsc written 4 months ago by ilovesuperheroes19930 • updated 4 months ago by Gautier Richard280
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Gene coverage from Bam files
bedtools written 5 months ago by David150 • updated 5 months ago by finswimmer11k
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Bedtools Merge .bed file with unique ID column
bedtools .bed written 6 months ago by reece0 • updated 6 months ago by ATpoint18k
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Script for changing genes nomenclature
bedtools scripting rna-seq written 6 months ago by Francisco Muñoz 0 • updated 6 months ago by vkkodali1.1k
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BedtoBam error: Why is this?
bedtools bedtobam rna-seq getfasta written 6 months ago by jaqx00840 • updated 6 months ago by Pierre Lindenbaum120k
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'Error: Unable to open file test1.bed. Exiting' , Bedtools help
bedtools .bed mergebed written 6 months ago by reece0 • updated 6 months ago by ATpoint18k
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bedtools complement error
bedtools written 6 months ago by bk1130 • updated 6 months ago by Alex Reynolds28k
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Pulling out interval adjoining regions
bedtools bed bedops interval written 6 months ago by rbronste240 • updated 6 months ago by Alex Reynolds28k
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Read depth interval comparison
read depth bed bedops bam bedtools written 7 months ago by rbronste240 • updated 7 months ago by Pierre Lindenbaum120k
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Extending BED intervals
bedtools bed bedops interval written 7 months ago by rbronste240 • updated 7 months ago by Alex Reynolds28k
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find coverage of specific exomes from a bam file
bedtools genomecov bam coverage bed written 7 months ago by lait130 • updated 7 months ago by Pierre Lindenbaum120k
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coverage of a SNP site?
bedtools ngs ase coverage snp written 7 months ago by Susmita Mandal40 • updated 7 months ago by Kevin Blighe44k
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Using BedTools to look at unique bed intervals between two files
bedtools written 7 months ago by a.rex190 • updated 7 months ago by Alex Reynolds28k
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