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generate a matrix of gene expressions and TFs from bed files
bedtools atac_seq written 4 months ago by el2410 • updated 3 months ago by Biostar ♦♦ 20
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Looping bedtools multicov on paired bam and bed files
bedtools chip-seq written 3 months ago by elb180 • updated 3 months ago by ATpoint36k
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Bedtools Fisher Genome File
bedtools genome fisher overlap chipseq written 4 months ago by megannj10 • updated 4 months ago by Pierre Lindenbaum129k
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bedtools bamtofastq: Segmentation fault (core dumped)
bedtools bamtofastq bam rna-seq written 4 months ago by Rashedul Islam370 • updated 4 months ago by h.mon30k
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Get intersection of files occuring in at least 2 files?
bedtools written 4 months ago by vctrm6710 • updated 4 months ago by Alex Reynolds30k
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How do I find insertions with BEDTools?
genome alignment sequence insertion bedtools written 5 months ago by AXR0 • updated 5 months ago by liorglic320
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Clustering and Bedtools
bedtools bedfile clustering written 3.1 years ago by user_g20 • updated 5 months ago by Biostar ♦♦ 20
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Using ATACseq to do motif analysis in the promoters of a gene set
atacseq bedtools rna-seq written 5 months ago by dljone020 • updated 5 months ago by h.mon30k
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sorting for bedtools genomecov doesn't work properly
bedtools bedpe sort rna-seq bedgraph written 5 months ago by Assa Yeroslaviz1.4k • updated 5 months ago by Kevin Blighe63k
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How to Bedtools intersect two different sorted BED files
bedtools written 5 months ago by caro-ca20 • updated 5 months ago by ATpoint36k
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Extract SNPs from VCF file located in genes or flanking +/- 5Kbp on GFF file
vcf bedtools gff written 6 months ago by User000380 • updated 6 months ago by jared.andrews076.4k
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about bamToBed and the reads that align to multiple genome coordinates
bedtools written 6 months ago by Bogdan1000 • updated 6 months ago by RamRS28k
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Bedtools option suggestion
bedtools coregenes genes written 6 months ago by K.Gee30
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