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2
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1
answer
9.4k
views
1
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Coveragebed, Depth/Breadth Of Coverage
bedtools coverage written 9.1 years ago by Newbionf10 • updated 9.1 years ago by Istvan Albert ♦♦ 84k
7
votes
3
answers
8.1k
views
5 follow
3
answers
Convert .Txt Into Bed Files
bedtools comparison written 9.1 years ago by Bioscientist1.7k • updated 9.0 years ago by Swbarnes21.5k
3
votes
1
answer
6.9k
views
1
answer
Bed File Bedpe Format
bedtools bed bam conversion written 9.0 years ago by Assa Yeroslaviz1.4k • updated 2.3 years ago by Biostar ♦♦ 20
7
votes
1
answer
5.5k
views
1
answer
Fastafrombed Problem
bedtools bed conversion fasta written 8.9 years ago by Sara130 • updated 8.9 years ago by Pierre Lindenbaum129k
5
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0
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3.6k
views
0
answers
88
votes
3
answers
51k
views
33 follow
3
answers
Bedtools Compare Multiple Bed Files?
bedtools intersect written 8.8 years ago by Bioscientist1.7k • updated 7.5 years ago by sjneph620
7
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3
answers
5.9k
views
5 follow
3
answers
8
votes
1
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4.5k
views
1
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Bedtools Intersectbed
bedtools intersect coverage written 8.7 years ago by Ian5.7k • updated 8.7 years ago by brentp23k
6
votes
2
answers
3.6k
views
2
answers
Intersectbed Overlap
bedtools overlap intersect written 8.7 years ago by Nicolas Rosewick9.0k • updated 8.7 years ago by Alex Reynolds30k
1
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1
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3.1k
views
1
answer
4
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1
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2.5k
views
1
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Bedtools To Compare A Vcf File From Samtools Mpileup With Dbsnp?
bedtools vcf written 8.7 years ago by Deniz210 • updated 8.7 years ago by Swbarnes21.5k
32
votes
4
answers
14k
views
17 follow
4
answers
Getting Unmapped Reads: Comparing Fastq To Bam
bedtools fastq bam samtools written 8.7 years ago by User 9996810 • updated 8.7 years ago by brentp23k
13
votes
3
answers
8.9k
views
5 follow
3
answers
Multi Thread Bedtools
bedtools parallel written 8.6 years ago by Nicolas Rosewick9.0k • updated 6.1 years ago by Biostar ♦♦ 20
3
votes
2
answers
1.4k
views
2
answers
To Group Items In Bed Files
bedtools merge written 8.6 years ago by Bioscientist1.7k • updated 8.6 years ago by Malachi Griffith18k
4
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1
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3.2k
views
1
answer
25
votes
1
answer
22k
views
6 follow
1
answer
How To Use Bedtools To Extract Promoters From A Mouse Bed File
bedtools bed extraction promoter fasta written 8.5 years ago by Anima Mundi2.7k • updated 8.5 years ago by Aaronquinlan11k
28
votes
3
answers
6.2k
views
7 follow
3
answers
15
votes
1
answer
3.7k
views
1
answer
3
votes
4
answers
9.7k
views
5 follow
4
answers
Genomecoveragebed - Bedtool For Reporting Per Base Genome Coverage
bedtools coverage written 8.5 years ago by Varun Gupta1.1k • updated 6.6 years ago by hygine5550
4
votes
1
answer
1.7k
views
1
answer
Convert Bamtobed Score
bedtools scoring written 8.4 years ago by Stevelor310 • updated 8.3 years ago by Pascal1.5k
11
votes
2
answers
5.4k
views
6 follow
2
answers
Counting The Whole Insert Size From Paired-End Reads As Coverage
bedtools paired written 8.4 years ago by Alastair Kerr5.2k • updated 8.4 years ago by Aaronquinlan11k
8
votes
2
answers
2.9k
views
2
answers
Per Base Coverage
bedtools coverage written 8.4 years ago by Info_Nowise10 • updated 8.4 years ago by Aaronquinlan11k
1
vote
1
answer
1.2k
views
1
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Does Bedtools Intersect -V Consider Unmapped Reads "As Not In B"
bedtools written 8.4 years ago by Jeremy Leipzig19k • updated 8.4 years ago by Ying W4.0k
3
votes
2
answers
2.9k
views
2
answers
Snps Comparison
bedtools gff vcftools snp written 8.4 years ago by Ric160 • updated 8.4 years ago by Occam380
0
votes
1
answer
2.3k
views
1
answer
How To Check Whole Genome With Bigwigsummary ?
bedtools bigwig written 8.4 years ago by Ar Es0 • updated 6.0 years ago by Biostar ♦♦ 20
20
votes
3
answers
3.6k
views
7 follow
3
answers
How To Find The Nearest Gene To A Retrotransposon Insert?
bedtools bed position mouse written 8.4 years ago by Joseph Hughes2.8k • updated 8.4 years ago by Alex Reynolds30k
54
votes
10
answers
7.9k
views
9 follow
10
answers
Tool: Bedtools: Analyzing Genomic Features
bedtools tool written 8.3 years ago by Istvan Albert ♦♦ 84k • updated 5.6 years ago by Aaronquinlan11k
118
votes
8
answers
56k
views
80 follow
8
answers
Tutorial: Piping With Samtools, Bwa And Bedtools
bedtools tutorial samtools unix bwa written 8.3 years ago by Ying W4.0k • updated 4.7 years ago by Yaseen Ladak30
32
votes
3
answers
8.7k
views
13 follow
3
answers
Picking Random Genomic Positions
perl bedtools bash written 8.1 years ago by PoGibas4.8k
5
votes
1
answer
7.9k
views
1
answer
Intersectbed - Overlap Analysis Usign Vcf And Bed Files
bedtools written 8.1 years ago by Khader Shameer18k • updated 8.1 years ago by Sukhdeep Singh10k
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