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Recent Replies
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A: Turn Off Blast Search On Reverse Complement Strand In Blastn by
jayeshkumarsundaram • 0
I think you should someone take care of the target or subject strandedness as well. You should po...
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C: RNA-Seq heatmap Scaling Problem by
RamRS ♦ 28k
Also, what is `mycol`? What is `mybreaks`? Can you give us a sample heatmap you're seeing now? Gi...
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C: RNA-Seq heatmap Scaling Problem by
akashagri19 • 0
My mistake head(heat) con.1 con.2 test1 test2 ...
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C: efetch by UID list returns more UIDs than requested by
ors9 • 0
I tried both formats using the webservice (see the response above). Both retrieved over 2000 resu...
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C: RNA-Seq heatmap Scaling Problem by
RamRS ♦ 28k
You're showing us `MyFPKM` but using `heat` to plot the heatmap. How do you get `heat` from `MyFP...
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C: RNA-Seq heatmap Scaling Problem by
akashagri19 • 0
Hello Kevin, I have these codes heatmap.2(heat,col = mycol,breaks = myBreaks, ...
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C: efetch by UID list returns more UIDs than requested by
genomax ♦ 87k
Were you requesting XML format? We know you will get that many if you do. If you request fasta fo...
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C: Cleaning/filtering RNA seq reads from novel species by
genomax ♦ 87k
> So what if I map the reads (not the assemblies?) with a tool like > Kraken2 against a dat...
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C: RNA-Seq heatmap Scaling Problem by
akashagri19 • 0
Sorry for the misinformation.
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C: RNA-Seq heatmap Scaling Problem by
RamRS ♦ 28k
You've not shown us a sample of your data or your current heatmap. Please add that in to give mor...
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C: RNA-Seq heatmap Scaling Problem by
RamRS ♦ 28k
Do not add an answer unless you're answering the top level question. This should have been a comm...
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A: How can you determine ploidy of a genome? by
h.mon ♦ 30k
GenomeScope FAQ says it can't be used to estimate ploidy, see the FAQ: > Q: Can GenomeScope b...
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