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<prev • 104 results • page 1 of 4 • next >
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Bedtools Coverage 1x Max Issue
bedtools exome depth written 2.1 years ago by kerriganblake • 0 • updated 6 days ago by melissawongukm • 10
6
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1
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135
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trouble with bedtools intersect and coverage
software error genome next-gen bedtools sequencing written 8 days ago by bio1234567 • 10 • updated 7 days ago by Vitis • 2.2k
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Bedtools shift in a defined chromosomal position
bedtools written 11 days ago by ste.lu • 40 • updated 11 days ago by Pierre Lindenbaum ♦ 121k
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bedtools sort -faidx in CWL
bedtools cwl sort written 17 days ago by dami • 0
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2
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147
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Combine .bed files and keep columns / headers
bedtools bedops bedmap written 24 days ago by fr • 100 • updated 24 days ago by ATpoint ♦ 18k
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bedtools multicov displays only the last BED feature
bedtools multicov written 23 months ago by ThePresident • 110 • updated 4 weeks ago by rania.hamdy1 • 0
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How to calculate average depth for each Amplicon in targeted amplicon sequencing?
bedtools next-gen written 14 months ago by bioinfo89 • 40 • updated 5 weeks ago by 601435543 • 10
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14 follow
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bedtools coverage gives error received illegal bin number, but that number isn't in my data!
bedtools bin chip-seq coverage error written 2.4 years ago by tara.alpert • 30 • updated 5 weeks ago by iqra • 0
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Question about Bedtools intersect: allows for multiple matches?
bedtools pybedtools written 6 weeks ago by fr • 100 • updated 6 weeks ago by jared.andrews07 • 2.5k
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terminate called after throwing an instance of 'std::bad_alloc?
bedtools data linux written 7 weeks ago by star • 150
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How does bedtools bamtobed calculate end position
bedtools bed bam written 7 weeks ago by 6timings • 0 • updated 7 weeks ago by John Marshall ♦ 1.6k
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how extract our desirable data from two table?
bedtools R intersect genomecoveragebed overlaps written 8 weeks ago by star • 150 • updated 7 weeks ago by archana.bioinfo87 • 120
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142
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pyBedTools.BedTools.intersect() not working on dataframe
bedtools pybedtools written 8 weeks ago by fr • 100
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how to solve this problem in bedtools genomecov?
bedtools genomecov mouse written 9 weeks ago by Lila M • 470 • updated 9 weeks ago by ATpoint ♦ 18k
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Edit score column in bed file
bedtools bed written 9 weeks ago by fr • 100 • updated 9 weeks ago by Alex Reynolds ♦ 28k
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Generating a bedgraph from a scored bed file
genome bedtools chip-seq coverage bedgraph written 4.3 years ago by Matt Corley • 40 • updated 12 weeks ago by Biostar ♦♦ 20
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1
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175
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Can bedtools subtract support multiple files?
bedtools written 3 months ago by msimmer92 • 190
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Get read start site using bedtools from bam file after merging paired end data
bbmerge bedtools alignment samtools rna-seq written 3 months ago by snishtala03 • 10
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Depth of coverage of Bed file regions?
bedtools bed coverage genome written 3 months ago by Jon17 • 10 • updated 3 months ago by h.mon ♦ 26k
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How extract the longest overlap?
bedtools deeptools bedops intersect overlap written 3 months ago by star • 150 • updated 3 months ago by Biostar ♦♦ 20
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326
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7 follow
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How to report genomic intervals essentailly overlapping in all files?
bedtools bed bam written 3 months ago by Vijay Lakhujani ♦ 4.2k
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extract some feature from peak?
bedtools featurecount diffbind macs2 chip-seq written 3 months ago by star • 150
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Plot pileup of reads multiply aligned to repetitive elements
bedtools plotting repmasker written 3 months ago by kevin.stachelek • 0
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10 follow
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How To Extract Scores From Bedgraph File Using Bed Tools
bedtools written 6.4 years ago by biorepine • 1.4k • updated 3 months ago by brianpenghe • 20
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what is difference between -i and -ibam in genomCoverage?
bedtools deeptools genomecoverage bamcoverage written 3 months ago by star • 150 • updated 3 months ago by ATpoint ♦ 18k
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Non Overlaps in bedtools intersect
bedtools intersect iclip nonoverlaps written 4 months ago by CrisMar • 70 • updated 3 months ago by Biostar ♦♦ 20
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Bedtools merge -d option help
bedtools ubuntu rstudio distance bedr written 3 months ago by jantu008 • 0
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199
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Merge the same coordinate in a table?
bedtools merge intersect genomics written 4 months ago by star • 150 • updated 4 months ago by zx8754 ♦ 7.5k
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bedtools intersect error?
bedtools intersect chip-seq written 4 months ago by star • 150
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5 follow
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Detecting expression in intergenic regions
bedtools genome rna-seq written 19 months ago by A. Domingues • 2.1k
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