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Recent Replies
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A: How to compare kallisto and stringtie output by
kristoffer.vittingseerup • 810
If you want to compare Kalliso and StringTie you need to quantify the same set of transcripts. Th...
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A: Can remote, but same type, tissue be used as RNA-Seq normal control for tumor st by
kristoffer.vittingseerup • 810
In **principal** yes - you would just have to argue why you would use something else (and you mig...
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C: Error while loading the data structrure in the ballgown tool by
ATpoint ♦ 9.3k
No, please go through the [tximport manual][1] carefully and see if you find the answer there. Th...
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A: Most efficient strategy to convert from Ensembl protein IDs (ENSP) to Entrez Gen by
Emily_Ensembl ♦ 16k
It's very easy using BioMart. You just filter by the list of ENSPs and get the NCBI gene IDs as o...
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C: No mismatch allowed setting in Bowtie2 (-N 0 does not help) by
Ankit • 30
Thank you, Santosh for the important suggestions. > However, I am not sure what you want to a...
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C: Plot lines color change in plotAvgProf2 [ChIPseeker] by
anu014 • 150
Greetings of the day Guangchuang! I tried the below commands , but it gave me error: requir...
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C: Should I specialise in bioinformatics? by
WouterDeCoster ♦ 34k
What is the added value of including that link in your post? Seems like spam to me.
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C: SRA files bulk downloads by
ATpoint ♦ 9.3k
...and? solved it?
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C: Error while loading the data structrure in the ballgown tool by
kristoffer.vittingseerup • 810
Please ask this as a new question - this will enable other people with the same problem to use th...
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C: Python Data Visualization Course. Last 3 spots left by
WouterDeCoster ♦ 34k
Agreed - that would make most sense.
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C: Should I specialise in bioinformatics? by
vaibhavkapoor082 • 0
Thanks for your guidance.
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C: Python Data Visualization Course. Last 3 spots left by
Emily_Ensembl ♦ 16k
My personal preference would be for things like this ("3 spots left") to be a boost on the origin...
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