0
votes
2
replies
56
views
0
votes
2
replies
23
views
updated 31 minutes ago by
lmlukoseviciute
▴
10
•
written 1 hour ago by
shubhamkumbhar420
•
0
0
votes
1
reply
37
views
updated 1 hour ago by
Pierre Lindenbaum
135k
•
written 1 hour ago by
mscpythonstudy
•
0
0
votes
1
reply
47
views
0
votes
1
reply
56
views
updated 25 minutes ago by
4galaxy77
▴
400
•
written 4 hours ago by
GiantSilverSoy
▴
20
580
votes
155
replies
64k
views
89 follow
0
votes
0
replies
61
views
0
votes
0
replies
38
views
6 hours ago by
pandey.gaurav
▴
130
2
votes
3
replies
98
views
updated 6 hours ago by
Zhilong Jia
★
1.7k
•
written 13 hours ago by
1961012
•
0
0
votes
0
replies
26
views
4
votes
4
replies
97
views
updated 8 hours ago by
seidel
7.6k
•
written 11 hours ago by
geneticatt
▴
120
0
votes
0
replies
36
views
11 hours ago by
carlstat123
•
0
0
votes
3
replies
105
views
updated 10 minutes ago by
lieven.sterck
11k
•
written 11 hours ago by
jaqx008
▴
90
1
vote
1
reply
84
views
updated 12 hours ago by
Mensur Dlakic
★
10k
•
written 16 hours ago by
au.rinki.bio
▴
10
21
votes
4
replies
2.2k
views
updated 8 hours ago by
Rob
▴
40
•
written 11 months ago by
Kevin Blighe
72k
3
votes
2
replies
188
views
0
votes
3
replies
184
views
updated 14 hours ago by
lieven.sterck
11k
•
written 26 days ago by
wangh920
•
0
4
votes
1
reply
2.8k
views
updated 14 hours ago by
xiaoyuzhangh
•
0
•
written 5.5 years ago by
jockbanan
▴
390
2
votes
3
replies
95
views
0
votes
0
replies
30
views
15 hours ago by
Mran
•
0
0
votes
11
replies
363
views
updated 13 hours ago by
Alex Reynolds
32k
•
written 16 days ago by
storm1907
•
0
2
votes
1
reply
2.0k
views
updated 16 hours ago by
Carolina Alejandra
•
0
•
written 7.3 years ago by
5heikki
9.7k
0
votes
0
replies
34
views
0
votes
0
replies
29
views
18 hours ago by
Begonia_pavonina
▴
20
1
vote
1
reply
65
views
updated 16 hours ago by
jared.andrews07
9.3k
•
written 18 hours ago by
Lpak
•
0
5
votes
10
replies
162
views
6 follow
0
votes
1
reply
65
views
5
votes
4
replies
95
views
0
votes
0
replies
112
views
2
votes
2
replies
94
views
20 hours ago by
William
★
4.8k
7
votes
7
replies
352
views
6 follow
5 hours ago by
guoxuantong
▴
120
2
votes
6
replies
116
views
23 hours ago by
sumitguptabt
•
0
1
vote
0
replies
43
views
23 hours ago by
Palgrave
▴
30
0
votes
0
replies
35
views
23 hours ago by
Sar
•
0
0
votes
2
replies
87
views
0
votes
0
replies
56
views
23 hours ago by
emilien.hourquet
•
0
1
vote
1
reply
62
views
0
votes
1
reply
55
views
updated 18 hours ago by
Carambakaracho
★
2.4k
•
written 1 day ago by
kilcdincer
▴
10
0
votes
3
replies
77
views
0
votes
1
reply
240
views
updated 1 day ago by
babalyigit
•
0
•
written 9 months ago by
martinaweil
•
0
2
votes
4
replies
217
views
updated 22 hours ago by
Kevin Blighe
72k
•
written 6 days ago by
kilcdincer
▴
10
4
votes
11
replies
178
views
0
votes
0
replies
53
views
23 hours ago by
User000
▴
440
0
votes
1
reply
56
views
updated 22 hours ago by
desouzareis.r
▴
220
•
written 1 day ago by
esimonova.me
▴
10
0
votes
0
replies
39
views
1 day ago by
ashwing.kofficial
•
0
0
votes
0
replies
70
views
0
votes
0
replies
73
views
0
votes
1
reply
92
views
updated 1 day ago by
swbarnes2
9.7k
•
written 1 day ago by
hydrobeanz
•
0
1
vote
1
reply
104
views
updated 1 day ago by
Mensur Dlakic
★
10k
•
written 1 day ago by
cthangav
•
0
Recent Locations •
All
EMBL-EBI, just now
China, just now
Barcelona, just now
India, just now
France/Nantes/Institut du Thorax - INSERM UMR1087, 2 minutes ago
Iran, 4 minutes ago
Frankfurt Am Main, 4 minutes ago
Recent Awards •
All
Teacher to
ahmad mousavi
▴
520
Popular Question to
William
★
4.8k
Commentator to
Nicolas Rosewick
9.3k
Popular Question to
reza
▴
250
Teacher to
Michael Dondrup
48k
Commentator to
ATpoint
48k
Recent Replies
Comment: How can I Extract Transposable element from a new genome assembly?
by
lieven.sterck
11k
Why would you not start from scratch with repeatmasker? It will be the most accurate way to mask repeats in your genome.
Simply mapping …
Answer: Snakemake with bwa_mem2_mem unable to open the ref file and doesn' t work
by
colindaven
★
2.7k
This is a pretty common task. Why not try out the snakemake pipeline put together by the Snakemake authors? Why reinvent the wheel ?
htt…
Comment: Question about methods monitoring the change from dsDNA/RNA to ssRNA/DNA
by
ATpoint
48k
I think you should ask this at a more suitable community that is more wetlab-orientated, such as a suitable SubReddit or ResearchGate. It i…
Comment: Snakemake with bwa_mem2_mem unable to open the ref file and doesn' t work
by
lmlukoseviciute
▴
10
Hello, a few things I see here, not sure if they will solve your problem.
1st your both inputs are the same R1 read, there is no R2.
2nd…
Comment: SHAPEIT2 - ERROR "BAD RECOMBINATION RATE"
by
4galaxy77
▴
400
Btw, shapeit2 is quite outdated now. shapeit4 is much more recent / faster / accurate https://anaconda.org/bioconda/shapeit4
Answer: Extract chromosome 1 - 22 fasta file
by
lmlukoseviciute
▴
10
Hello, you I am not really sure if you want to see only chromosome names or the sequences it self. But as of the example you can try.
`zca…
Comment: Extract chromosome 1 - 22 fasta file
by
shenwei356
5.8k
seqkit grep -i -r -p '^chr[\dXY]+$' h19.fa.gz -o result.fa.gz
Comment: GATK GenomicsDBImport for consolidate GVCF
by
Pierre Lindenbaum
135k
in GATK the option `-L` is designed to define an interval (a bed file, a interval_file, etc..) not , as far as I can see, a list of of "fra…
Comment: R - A bioinformatic analysis programming language for NGS
by
guoxuantong
▴
120
Thank you so much for informing me. I've removed the reference numbers in the body of the article, and I find the platform seems to be unab…
Comment: Finding all instances of a recurring motif in a repeat protein
by
NeuralCode
•
0
Thanks so much! HMMer is great. Now pulling out hundreds of instances of this domain for my big alignment.
Answer: GSEA for RNA_seq dataset
by
Zhilong Jia
★
1.7k
Using all genes with signed P-value to rank genes, where the sign is from LogFC.
and `GSEAPreranked` module in GSEA.
ref: [Gene Ranki…
Comment: How can I Extract Transposable element from a new genome assembly?
by
Philipp Bayer
6.9k
if you can transform the bed to gff (galaxy has tools for that), you could also use liftoff which wraps all of this in a pipeline https://g…
Comment: Hunting invisible characters?
by
seidel
7.6k
Another way to see hidden characters is to pipe them through octal dump: `cat infile | od -c`
this will print out hidden characters, newlin…
Traffic: 2526 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6