Showing selected topics • reset
0
votes
0
answers
523
views
0
answers
4
votes
1
answer
668
views
1
answer
written 23 months ago by
edoardo.piombo • 20
• updated
23 months ago by
Alex Reynolds ♦ 30k
8
votes
3
answers
3.3k
views
3
answers
written 5.8 years ago by
andrew.j.skelton73 ♦ 6.0k
• updated
2.9 years ago by
robinvanderlee • 10
3
votes
1
answer
1.8k
views
1
answer
written 3.8 years ago by
R.Blues • 120
• updated
3.8 years ago by
Santosh Anand ♦ 5.1k
1
vote
1
answer
985
views
1
answer
written 4.0 years ago by
anshupa.vssut • 50
• updated
4.0 years ago by
Chris Miller ♦ 21k
0
votes
1
answer
1.1k
views
1
answer
written 5.3 years ago by
Saad Khan • 400
• updated
5.3 years ago by
Antonio R. Franco • 4.5k
4
votes
1
answer
1.3k
views
1
answer
written 5.8 years ago by
na.cna30 • 0
• updated
5.6 years ago by
Emily_Ensembl ♦ 21k
Recent Votes
- C: Variant Call Format (.vcf) conversion to .bam
- A: Plotting large file size of bedtools genomecov output
- RNASeq data: STAR low alignment score
- C: ITSx ITS Extraction Software Error
- A: Bacterial genome assembly for comparative genomic analysis
- A: How to deal with high duplication rate in FASTQC ( de novo transcriptom assembly
- Things you wish you knew when entering the bioinformatics field
Recent Locations •
All »
- France/Nantes/Institut du Thorax - INSERM UMR1087, 7 minutes ago
- south africa, 9 minutes ago
- United States, 13 minutes ago
Recent Awards • All »
- Teacher to genomax ♦ 89k
- Appreciated to Kevin Blighe ♦ 65k
- Supporter to camillab. • 20
- Scholar to Kevin Blighe ♦ 65k
- Scholar to ATpoint ♦ 38k
- Scholar to Sam • 3.1k
Recent Replies
-
C: testing set for RNA-seq AML by
Ali • 0
Thanks for your reply I use TCGA data was fine to download and run the analysis where the sampl...
-
C: empty fastq files created by docker bcl2fastq2 v2.20 OSX by
akh22 • 40
The input folder appears to be intact, containing everything original except the samplesheet.csv...
-
C: how to split M3VCF by ID? by
Pierre Lindenbaum ♦ 130k
I had to google for m3vcf: https://genome.sph.umich.edu/wiki/M3VCF_Files > is there an automa...
-
C: Difference in imputation between platforms and RS names by
anamaria • 100
it seems that characteristics of overlapping SNPs is that there is not many of them who have very...
-
C: testing set for RNA-seq AML by
newbio17 • 230
Have you tried [GEO][1] or [cBioPortal][2] to see if they have any dataset you could use? [1]...
-
C: RNASeq data: STAR low alignment score by
newbio17 • 230
If you want another method of checking for rRNA to double check, you can try `split_bam.py` from ...
-
C: Transcriptome analysis of two closely related plant species by
Istvan Albert ♦♦ 84k
yes, you can split a bam file by chromosome, and spawn a separate process with gnu parallel
-
C: Compare transcriptome between different species of Leishmania by
Dunois • 20
`Prokka` with eukaryotes though? Leishmania spp. are eukaryotes.
-
C: Error running cutadapt in multithread mode by
Francesco • 10
Thank you, I created a conda enviroment for cutadapt with python 3.7 and now it's working in mult...
-
C: Difference in imputation between platforms and RS names by
anamaria • 100
I completely understand you. And I already confirmed analysis I did in 2020 in other known GWAS r...
-
C: Difference in imputation between platforms and RS names by
Kevin Blighe ♦ 65k
I could only speculate, to be honest. As I am generally familiar with your experiment, my advice ...
-
C: Variant Call Format (.vcf) conversion to .bam by
RamRS ♦ 30k
How is the second link relevant to this question?
Use of this site constitutes acceptance of our User
Agreement
and Privacy
Policy.
Powered by Biostar
version 2.3.0
Traffic: 1055 users visited in the last hour