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Subset XStringSet by Sequence Name
bioconductor written 15 hours ago by pedrorodrigues • 10 • updated 8 hours ago by James Ashmore • 2.0k
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News: Course: Applied Statistics and Bioinformatics with R and Bioconductor. (Berlin, 22-26 January 2018)
biostatistics R bioconductor news bioinformatics written 2 days ago by carlopecoraro2 • 510
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Analyzing specific genes in a microarray (RNA expression)
bioconductor limma microarrays written 3 days ago by Pol • 50 • updated 3 days ago by h.mon ♦ 8.7k
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How Do I Convert Fbgn (Flybase Ids) To Gene Symbols In R/Bioconductor?
R bioconductor id conversion written 4.4 years ago by enricoferrero • 720 • updated 6 days ago by aprezvykh • 0
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Tutorial: How to create a mutation landscape (waterfall) plot with GenVisR
R bioconductor graphics tutorial genvisr written 18 months ago by Obi Griffith ♦ 15k
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Retrieving phytozome data using the R bioconductor package biomaRt
phytozome R bioconductor biomart written 17 days ago by Fabio Marroni • 1.4k • updated 17 days ago by Mike Smith • 250
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DMRcate results: How to find out which CpG sites constitute each DMR
R bioconductor methylation dmrcate written 4 weeks ago by c.ryder3 • 10 • updated 4 weeks ago by halo22 • 90
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Too many significant genes?
bioconductor microarray differential expression written 4 weeks ago by ab123 • 0 • updated 4 weeks ago by mforde84 • 900
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194
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How to create a design matrix for Cpg.annotate?
R bioconductor dmrcate cpg.annotate written 5 weeks ago by c.ryder3 • 10 • updated 5 weeks ago by e.rempel • 430
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A workflow for identification of differentially methylated regions, starting with a data frame of beta values?
450k R bioconductor methylation dmrcate written 5 weeks ago by c.ryder3 • 10 • updated 5 weeks ago by halo22 • 90
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convert bam to clustal
R clustal alignment bioconductor bam written 5 weeks ago by bioinfo8 • 90
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Problem with topGO: GO term enrichment analysis
R bioconductor topgo go error written 5 weeks ago by cristian • 80 • updated 5 weeks ago by e.rempel • 430
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Problem installing Rgraphviz in R
R bioconductor rgraphviz graphviz plot written 5 weeks ago by cristian • 80 • updated 5 weeks ago by h.mon ♦ 8.7k
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Problem using biomaRt
ensembl biomart bioconductor error R written 6 weeks ago by cristian • 80
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data set geneList not found, problem in the topGO tutorial
functional genomics bioconductor topgo go all written 6 weeks ago by cristian • 80
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Tutorial: Using Subversion to update /devel branch of Bioconductor package
subversion bioconductor tutorial development written 6 weeks ago by Bohdan Khomtchouk • 300
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176
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How do I draw a heatmap in r with two colors in a cell?
R bioconductor complexheatmap written 9 weeks ago by Tonny • 20 • updated 9 weeks ago by EagleEye • 4.7k
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News: Genomic Data Visualization and Interpretation Workshop
ggplot genvisr news R bioconductor rna-seq written 9 weeks ago by carlopecoraro2 • 510
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News: Course: Applied Statistics and Bioinformatics with R and Bioconductor
R bioconductor metagenomics news statistics written 9 weeks ago by carlopecoraro2 • 510 • updated 9 weeks ago by norman.mayer • 10
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Normalising Affymetrix Human Tiling 2.0R Set arrays for ChIP-chip
bioconductor chip-chip tiling array written 9 weeks ago by Nathan • 0
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News: Bioconductor 2017 Conference, Boston, July 26-28
R bioconductor conference news written 6 months ago by Sean Davis ♦ 23k • updated 10 weeks ago by jinals • 0
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Biomart Bioconductor - Retrieving All Entrezgenes Of Hsapiens_Gene_Ensembl
R biomart bioconductor written 5.2 years ago by sthait • 70 • updated 10 weeks ago by macmath • 110
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Using PAcalls for Clariom chips
R bioconductor microarray written 11 weeks ago by kmvaldez2 • 0 • updated 11 weeks ago by WouterDeCoster ♦ 21k
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edgeR GLM paired samples analysis - advice required
bioconductor edger design rna-seq written 11 weeks ago by Duff • 630
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Expression data missing in a GEO study
geo bioconductor geoquery written 3.0 years ago by William • 3.9k • updated 3 months ago by vegard nygaard • 80
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Bioconductor Graphite package : Cannot retrive pathways
R bioconductor pathways written 3 months ago by eshansharma15 • 10
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RNA-Seq in baySeq - how to interpret a result
bayseq R bioconductor rna-seq written 3 months ago by iza08.ik • 20
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174
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2
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trying to identify all tss' for a mouse genomewide
bioconductor galaxy biomart rna-seq ucsc written 3 months ago by omd • 10 • updated 3 months ago by Charles Plessy • 2.2k
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CoverageView package_Error in 1:nrow(grDF) : argument of length 0
R bioconductor coverageview mclapply written 3 months ago by bioinfo8 • 90
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206
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RNA-Seq in Bioconductor
data sets bioconductor rna-seq R written 3 months ago by iza08.ik • 20
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