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4
votes
1
answer
175
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1
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Retrieve previous R package
R bioconductor written 8 weeks ago by rse • 70 • updated 6 days ago by h.mon ♦ 22k
0
votes
1
answer
77
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1
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Bioconductor, how to select a subset of samples in an ExpressionSet?
bioconductor expressionset subset written 15 days ago by Davide Chicco • 40 • updated 14 days ago by Kevin Blighe ♦ 35k
4
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1
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1.5k
views
1
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Iranges Basic Binning
R bioconductor written 6.8 years ago by Zev.Kronenberg ♦ 11k • updated 19 days ago by Biostar ♦♦ 20
11
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2
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6.0k
views
8 follow
2
answers
Work With Dnacopy (Bioconductor) And Varscan Copynumber Results
varscan bioconductor copynumber written 7.5 years ago by Mdeng • 510 • updated 6 weeks ago by noonbobnoon • 10
5
votes
1
answer
211
views
1
answer
Extracting Flanking Regions across TSS using R scripts
R bioconductor tss coding ensembl written 7 weeks ago by r.tor • 0 • updated 6 weeks ago by bernatgel • 1.5k
23
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0
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1.1k
views
27 follow
0
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Tool: EnhancedVolcano: Publication-ready volcano plots with enhanced colouring and labeling
bioconductor ggplot2 ggrepel tool volcano plot written 4 months ago by Kevin Blighe ♦ 35k
3
votes
3
answers
171
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5 follow
3
answers
Is there a GRCh37 equivalent of EnsDb.Hsapiens.v86 or some other method for getting a complete list of genes and their coordinates from GRCh37?
assembly bioconductor genomics R written 7 weeks ago by SpacemanSpiffo • 10 • updated 7 weeks ago by toralmanvar • 730
7
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1
answer
114
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1
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How do I find the set of a genomicrange? (same as union(gr, gr))
R bioconductor genomicranges written 7 weeks ago by endrebak852 • 90 • updated 7 weeks ago by Michael Dondrup ♦ 45k
0
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5
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169
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5
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Explore objects in R (ChiPseeker)
R bioconductor chipseeker written 7 weeks ago by lucatucciarone • 40
7
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2
answers
156
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2
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How do I subset a GRanges on chromosome, region and strand?
R bioconductor genomicranges written 7 weeks ago by endrebak852 • 90 • updated 7 weeks ago by Bastien Hervé ♦ 2.8k
0
votes
0
answers
74
views
0
answers
CAGEFightR to get CTSS from CAGE error
bioconductor cage-seq written 7 weeks ago by bharata1803 • 390
1
vote
0
answers
118
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0
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Differential transcript usage StageR error message
R bioconductor stage-r drimseq dtu written 8 weeks ago by akilabioinfo • 0 • updated 8 weeks ago by zx8754 ♦ 6.2k
9
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3
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21k
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9 follow
3
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Obtaining The Snp Rs Number With The Chromosomal Position
R bioconductor snps written 5.7 years ago by Sheila • 280 • updated 8 weeks ago by hsiaoyi0504 • 40
1
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0
answers
120
views
0
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Install Elmer 1.4.2
bioconductor elmer written 9 weeks ago by vahid • 10
1
vote
1
answer
182
views
1
answer
Can't load Bioconductor package genomewidesnp6cdf in R
affymatrix R bioconductor written 9 weeks ago by andbeonetraveler • 0 • updated 9 weeks ago by Santosh Anand ♦ 4.4k
0
votes
1
answer
1.8k
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1
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Bioconductor Rankprod Strange Results.
R bioconductor written 6.9 years ago by Iddius • 0 • updated 10 weeks ago by Biostar ♦♦ 20
0
votes
1
answer
238
views
1
answer
How to map Affymetrix probe ID's from a GEO dataset to corresponding gene symbols?
geo R bioconductor written 12 weeks ago by Davide Chicco • 40 • updated 10 weeks ago by Biostar ♦♦ 20
0
votes
1
answer
214
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1
answer
Bioconductor getGEO(), how to convert a single eset of GSE matrix files to a list of esets?
R bioconductor getgeo written 11 weeks ago by Davide Chicco • 40
5
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2
answers
336
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2
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Unable to map genes to KEGG pathway using pathview
R bioconductor oryza sativa kegg clusterprofiler written 3 months ago by rice.researcher • 130 • updated 11 weeks ago by bigmawen • 310
1
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0
answers
142
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0
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Help to interpret plot_network output
R bioconductor written 12 weeks ago by DVR • 20 • updated 12 weeks ago by zx8754 ♦ 6.2k
0
votes
0
answers
146
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0
answers
R bioconductor package `rtracklayer` possible memory leakage
R gff bioconductor memory leakage written 12 weeks ago by Chirag Parsania • 1.3k
2
votes
1
answer
720
views
1
answer
genlist for clusterprofiler
R bioconductor clusterprofiler written 10 months ago by archie • 70 • updated 3 months ago by zx8754 ♦ 6.2k
2
votes
1
answer
217
views
1
answer
Showing more terms in the result of GESA by ClusterProfiler
R bioconductor clusterprofiler written 3 months ago by ytlin610 • 60 • updated 3 months ago by zx8754 ♦ 6.2k
6
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2
answers
5.1k
views
2
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Problem In Installing Biomart For R Version 3.0.2 In Windows
R biomart bioconductor written 5.0 years ago by jack • 420 • updated 3 months ago by zx8754 ♦ 6.2k
4
votes
1
answer
262
views
1
answer
2 peak files in plotAvgProf2 [ChIPseeker]
R bioconductor chip-seq chipseeker written 3 months ago by anu014 • 160 • updated 3 months ago by zx8754 ♦ 6.2k
5
votes
1
answer
243
views
8 follow
1
answer
Reading Clariom D Human CEL files results in missing CDF enviroment error
R bioconductor expression array written 3 months ago by jonifg • 40 • updated 3 months ago by R.Blues • 80
1
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0
answers
251
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0
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maftools - no chromosomal coordinates
R bioconductor snp written 5 months ago by sumithrasank75 • 100 • updated 3 months ago by Biostar ♦♦ 20
1
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0
answers
153
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0
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News: Bioconductor 3.8 Release Schedule
R bioconductor news written 3 months ago by Kevin Blighe ♦ 35k
3
votes
1
answer
533
views
1
answer
Trouble with GenomicFeatures Package
R bioconductor genomicranges genomicfeatures written 10 months ago by MarjoryMollusc • 40 • updated 3 months ago by zx8754 ♦ 6.2k
7
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2
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1.0k
views
2
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Automation of R package loading
R bioconductor written 2.9 years ago by hakimelakhrass • 70 • updated 3 months ago by RamRS ♦ 20k
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