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How do I map Affymetrix probe IDs to gene symbols in R?
R bioconductor written 5 days ago by a.rider2 • 10 • updated 5 days ago by russhh • 2.2k
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2
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785
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Tool: ReactomePA: an R/Bioconductor package for reactome pathway analysis and visualization
tool pathway R bioconductor reactomepa visualization written 10 months ago by Guangchuang Yu • 1.4k • updated 8 days ago by #### • 90
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0
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72
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Expression data extraction error. Logical result as expression matrix
bioconductor geoquery gse written 17 days ago by hkarakurt • 0
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0
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134
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Expression data preprocess and normalization
geo R bioconductor gse rna-seq written 26 days ago by hkarakurt • 0
0
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0
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131
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Error encountered while running stattest from ballgown package
ballgown stattest bioconductor rna-seq written 29 days ago by Vijay Lakhujani • 670
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2
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121
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5 follow
2
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using biomaRt in R to annotate SNPs to Genes within 1000kb
R biomart bioconductor annotation written 4 weeks ago by Sheila • 170 • updated 4 weeks ago by Emily_Ensembl ♦ 11k
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126
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Heatmap for txt data.frame or matrix
bioconductor oligo microarray heatmap written 4 weeks ago by ab123 • 0
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135
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0
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Installation of Bioconductor package: lpsymphony
bioconductor written 11 weeks ago by haiying.kong • 150 • updated 5 weeks ago by Biostar ♦♦ 20
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2
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142
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2
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Ensembl Biomart Plant database
R bioconductor biomart written 6 weeks ago by #### • 90 • updated 6 weeks ago by Mike Smith • 200
2
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1
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154
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1
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biomaRt getBM() returns 0 result
R biomart bioconductor written 7 weeks ago by xioli2013 • 0
0
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2
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152
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2
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How to exclude probes from affy microarray before normalization?
probes bioconductor affy microarrays written 8 weeks ago by peter pfand • 60 • updated 8 weeks ago by Santosh Anand • 2.2k
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1
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159
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1
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Error in lmfit : row dimension of design doesn't match column dimension of data object
R bioconductor microarray data affymetrix written 8 weeks ago by muhammadzubair777 • 10 • updated 8 weeks ago by genomax ♦ 28k
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138
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News: Bioconductor 2017 Conference, Boston, July 26-28
R bioconductor conference news written 10 weeks ago by Sean Davis ♦ 23k
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147
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How to extract the numerical expression values for plotting time series curves for this NCBI GEO dataset using the GPL19046 Yeast_WG chip / platform?
time-series bioconductor microarray transcription written 10 weeks ago by thomas.f.hahn2 • 90
2
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1
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261
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Deconvolution methods on RNAseq data
R bioconductor next-gen rna-seq sequencing written 3 months ago by Ron • 560 • updated 10 weeks ago by shauty • 0
4
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2
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157
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2
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getGEO and getGEOfile error
geoquery R bioconductor getgeo written 10 weeks ago by pengchy • 330 • updated 10 weeks ago by theobroma22 • 610
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227
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Job: Bioinformatics teaching session with graduate or freelance expert
R bioconductor gene expression job transcriptome written 11 weeks ago by ab123 • 0
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3
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1.2k
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3
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How to install a specific version of R package in Bioconductor?
R bioconductor deseq2 rna-seq version written 12 months ago by xieshaojun0621 • 80 • updated 12 weeks ago by jrj.healey • 1.5k
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136
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Curiosity about DESeq2
bioconductor deseq2 rna-seq written 12 weeks ago by tiago211287 • 720
0
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1
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138
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1
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Problem Annotation Construction with pdInfoBuilder - Microarray Bioconductor
bioconductor nimblegene microarray pdinfobuilder written 12 weeks ago by thyagoleal • 0
1
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1
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234
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1
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Errors when extracting significant genes per GO.id from topgo data
R bioconductor topgo rna-seq written 3 months ago by tiago211287 • 720
24
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4
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3.2k
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5 follow
4
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Homology + Bioconductor
gene R bioconductor homology orthologues written 7.0 years ago by Mike Dewar • 1.5k • updated 3 months ago by Biostar ♦♦ 20
1
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1
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228
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SOLVED: Having trouble installing Bioconductor package GEOquery
R bioconductor written 3 months ago by daisycutter4 • 0
0
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152
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invalid class NChannelSet object: featureNames differ between assayData and featureData
bioconductor microarray biobase nchannelset written 3 months ago by thyagoleal • 0
4
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2
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3.3k
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5 follow
2
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How To Read A Fasta File With The Bio3D Package
fasta R bioconductor written 6.3 years ago by laemtao • 40 • updated 3 months ago by Biostar ♦♦ 20
4
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5
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374
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5 follow
5
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Job: Research advice needed
bioconductor job written 3 months ago by tfhahn • 30
1
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0
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646
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0
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Job: Bioinformatics Research Consultant needed for constructing TFBS and regulatory networks from time series plots
bioconductor network transcription factors job written 3 months ago by tfhahn • 30
17
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4
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4.7k
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9 follow
4
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Peak Detection In Intergenic Regions In Rna-Seq Data
rna bioconductor peak-calling coverage written 6.9 years ago by Michael Dondrup ♦ 41k • updated 3 months ago by Charles Warden ♦ 4.8k
1
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225
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Which Bioconductor packages?
R bioconductor networks written 3 months ago by tfhahn • 30
46
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3
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468
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15 follow
3
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Develop an R package for CRAN vs BioConductor
R bioconductor cran packages written 4 months ago by Helene • 360 • updated 4 months ago by ddiez • 1.6k
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