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<prev • 604 results • page 1 of 21 • next >
5
votes
1
answer
153
views
1
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Is lfcShrink only useful only for visualization?
R bioconductor rna-seq dseq2 written 4 days ago by Fawzi Yassine • 0
0
votes
1
answer
90
views
1
answer
Problems with ArrayExpress datasets downloads on Bioconductor
arrayexpress bioconductor written 23 days ago by Davide Chicco • 80 • updated 4 days ago by jorgeklz • 0
15
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4
answers
1.5k
views
10 follow
4
answers
Mapping Ensembl Gene IDs with dot suffix
gene ensembl biomart bioconductor R written 12 months ago by mk • 90 • updated 8 days ago by zx8754 ♦ 6.8k
1
vote
0
answers
54
views
0
answers
error in density plot - methylation EPIC data
R bioconductor written 10 days ago by junehicks0 • 10 • updated 10 days ago by zx8754 ♦ 6.8k
1
vote
0
answers
109
views
0
answers
How to add a specific column from related table
R bioconductor ballgown rna-seq written 17 days ago by Redse • 30
3
votes
1
answer
96
views
1
answer
Assign a genomic region to a window
R bioconductor windows genomicranges written 17 days ago by Ana • 140 • updated 17 days ago by benformatics • 640
0
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0
answers
78
views
0
answers
News: Genomic Data Visualization course
R bioconductor visualization news written 20 days ago by carlopecoraro2 • 910
0
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0
answers
84
views
0
answers
Bioconductor, how to convert an ExpressionFeatureSet to an ExpressionSet?
bioconductor written 22 days ago by Davide Chicco • 80
2
votes
1
answer
113
views
1
answer
Using the Correct Ensembl Organism Database in topGO in R
R bioconductor topgo ensembl written 23 days ago by miles.thorburn • 80 • updated 23 days ago by h.mon ♦ 24k
3
votes
1
answer
148
views
1
answer
How do I extract genes from a KEGG pathway
gene R bioconductor written 26 days ago by ammasakshay • 20
0
votes
0
answers
102
views
0
answers
News: Applied Statistics and Bioinformatics with R and Bioconductor
R bioconductor next-gen news written 29 days ago by carlopecoraro2 • 910
9
votes
1
answer
127
views
1
answer
Filter Fastq file by seq
python ngs bioconductor R written 4 weeks ago by ta_awwad • 200
5
votes
1
answer
150
views
1
answer
Parse raw vcf in R from CollapsedVCF (VariantAnnotation library)
vcf bioconductor variantannotation written 5 weeks ago by ricardoguerreiro2121 • 20
15
votes
0
answers
326
views
7 follow
0
answers
Tool: PCAtools: everything Principal Components Analysis
R bioconductor pca eigenvector tool written 6 weeks ago by Kevin Blighe ♦ 39k • updated 6 weeks ago by prasundutta87 • 330
27
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0
answers
2.0k
views
32 follow
0
answers
Tool: EnhancedVolcano: Publication-ready volcano plots with enhanced colouring and labeling
bioconductor ggplot2 ggrepel tool volcano plot written 6 months ago by Kevin Blighe ♦ 39k
6
votes
2
answers
207
views
2
answers
GenomicDataCommons request timeouts cases() %>% ... %>% results_all()
genomicdatacommons bioconductor R http written 8 weeks ago by mk • 90 • updated 8 weeks ago by Sean Davis ♦ 25k
4
votes
1
answer
239
views
1
answer
Retrieve previous R package
R bioconductor written 4 months ago by rse • 70 • updated 10 weeks ago by h.mon ♦ 24k
3
votes
1
answer
177
views
1
answer
Bioconductor, how to select a subset of samples in an ExpressionSet?
bioconductor expressionset subset written 11 weeks ago by Davide Chicco • 80 • updated 11 weeks ago by Kevin Blighe ♦ 39k
4
votes
1
answer
1.5k
views
1
answer
Iranges Basic Binning
R bioconductor written 7.0 years ago by Zev.Kronenberg ♦ 11k • updated 12 weeks ago by Biostar ♦♦ 20
11
votes
2
answers
6.1k
views
8 follow
2
answers
Work With Dnacopy (Bioconductor) And Varscan Copynumber Results
varscan bioconductor copynumber written 7.6 years ago by Mdeng • 520 • updated 3 months ago by noonbobnoon • 10
5
votes
1
answer
333
views
1
answer
Extracting Flanking Regions across TSS using R scripts
R bioconductor tss coding ensembl written 3 months ago by r.tor • 40 • updated 3 months ago by bernatgel • 1.8k
3
votes
3
answers
299
views
5 follow
3
answers
Is there a GRCh37 equivalent of EnsDb.Hsapiens.v86 or some other method for getting a complete list of genes and their coordinates from GRCh37?
assembly bioconductor genomics R written 3 months ago by SpacemanSpiffo • 10 • updated 3 months ago by toralmanvar • 750
7
votes
1
answer
190
views
1
answer
How do I find the set of a genomicrange? (same as union(gr, gr))
R bioconductor genomicranges written 3 months ago by endrebak852 • 90 • updated 3 months ago by Michael Dondrup ♦ 45k
0
votes
5
answers
221
views
5
answers
Explore objects in R (ChiPseeker)
R bioconductor chipseeker written 3 months ago by lucatucciarone • 50
7
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2
answers
343
views
2
answers
How do I subset a GRanges on chromosome, region and strand?
R bioconductor genomicranges written 3 months ago by endrebak852 • 90 • updated 3 months ago by Bastien Hervé ♦ 3.7k
0
votes
0
answers
126
views
0
answers
CAGEFightR to get CTSS from CAGE error
bioconductor cage-seq written 3 months ago by bharata1803 • 420
1
vote
0
answers
175
views
0
answers
Differential transcript usage StageR error message
R bioconductor stage-r drimseq dtu written 4 months ago by akilabioinfo • 0 • updated 4 months ago by zx8754 ♦ 6.8k
9
votes
3
answers
22k
views
9 follow
3
answers
Obtaining The Snp Rs Number With The Chromosomal Position
R bioconductor snps written 5.9 years ago by Sheila • 290 • updated 4 months ago by hsiaoyi0504 • 40
1
vote
0
answers
160
views
0
answers
Install Elmer 1.4.2
bioconductor elmer written 4 months ago by vahid • 10
1
vote
1
answer
280
views
1
answer
Can't load Bioconductor package genomewidesnp6cdf in R
affymatrix R bioconductor written 4 months ago by andbeonetraveler • 0 • updated 4 months ago by Santosh Anand ♦ 4.6k
<prev • 604 results • page 1 of 21 • next >
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