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<prev • 394 results • page 1 of 14 • next >
3
votes
1
answer
92
views
1
answer
mapping gene type or biotype to ENSEMBL ID
org.hs.eg.db biomart ensembl annotation written 17 days ago by basuanubhav • 10 • updated 17 days ago by rpolicastro ♦ 3.2k
0
votes
1
answer
106
views
1
answer
How to get Affymetrix probe annotation include only specific genes?
biomart affymetrix probesets gse17536 written 4 weeks ago by necla.kayaalp • 0 • updated 4 weeks ago by Alex Reynolds ♦ 31k
0
votes
0
answers
172
views
0
answers
biomaRt not finding all genes
genome assembly biomart alignment id mapping written 6 weeks ago by danielcgingerich • 0
0
votes
1
answer
233
views
1
answer
Accessing local installation of biomart results in "Unexpected format to the list of available marts"
xml biomart mart martconfigurator rna-seq written 7 weeks ago by anhvo711 • 0 • updated 6 weeks ago by Mike Smith • 1.6k
1
vote
1
answer
137
views
1
answer
Fethcing HGNC symbols using R package biomaRt
R biomart rna-seq written 8 weeks ago by omicsnstuff • 0 • updated 8 weeks ago by Kevin Blighe ♦ 69k
1
vote
1
answer
128
views
1
answer
Problem with BiomaRt::useMart function Landscape Genomics
ensembl biomart landcape genomics usamart plant written 8 weeks ago by simone.castellana • 10 • updated 8 weeks ago by Emily_Ensembl ♦ 21k
3
votes
1
answer
135
views
1
answer
biomaRt getSequence results of gene_exon in wrong order
R biomart getsequence order exons written 8 weeks ago by Hematocite • 0 • updated 8 weeks ago by swbarnes2 ♦ 9.4k
2
votes
1
answer
195
views
1
answer
Retrieve 5'UTR sequences for ensembl_transcript_id's with unique start/end positions
ensembl biomart sequence R written 8 weeks ago by omit3333 • 0
1
vote
2
answers
211
views
2
answers
LINK SNPS TO GENES USING BIOMART, KEEPING YOUR INITIAL POSITIONS IN THE RESULTING FILE
snps biomart genes mapping written 12 weeks ago by SGMS • 70 • updated 11 weeks ago by Emily_Ensembl ♦ 21k
3
votes
3
answers
313
views
3
answers
biomaRt error while converting ensembl gene Id to uniprot ID
R biomart uniprot ensembl written 4 months ago by manaswwm • 130
3
votes
1
answer
453
views
1
answer
is there a soln to Error in scan file = file, what = what, sep = sep, quote = quote, dec = dec, line 1 did not have 3 elements
R biomart gene ontology written 3 months ago by peter.berry5 • 20
29
votes
1
answer
1.8k
views
14 follow
1
answer
getBM error while using bioMart
ensembl biomart getbm written 3 months ago by MatStat • 130 • updated 3 months ago by user17394 • 0
1
vote
2
answers
250
views
5 follow
2
answers
Help needed for Ensembl Gene ID conversion for RNA-seq data - biomart / EnsDb.Hsapiens.v86
R bioconductor biomart rna-seq written 3 months ago by yangjianhunt • 10 • updated 3 months ago by sandeep.amberkar18 • 50
0
votes
0
answers
197
views
0
answers
Pybiomart quering Ensembl Variation 101
gene python biomart software error ensembl written 4 months ago by tomaszewskiolaf • 0
0
votes
0
answers
259
views
0
answers
bioMart ENSEMBL_MART_VEGA exists?
gene name vega biomart written 4 months ago by michael.j.apostolides • 10
0
votes
0
answers
180
views
0
answers
Can you do KEGG analysis in R without Entrez I.D.s
R biomart entrez rna-seq kegg written 4 months ago by devarts • 20
0
votes
0
answers
392
views
0
answers
Can getSequence get sequence of coding and its upstream in one entry?
getsquence biomart written 9 months ago by oboeconcerto314 • 0 • updated 4 months ago by Biostar ♦♦ 20
3
votes
1
answer
357
views
1
answer
topGO GO enrichment analysis for common DEGs from multiple pairwise comparisons
ensembl biomart topgo go enrichment written 5 months ago by anikng • 0 • updated 5 months ago by antonioggsousa • 1.9k
1
vote
1
answer
219
views
1
answer
Why bioMart query results in a low coverage of annotations
biomart microarray written 5 months ago by xiaoyonf • 40 • updated 5 months ago by _r_am ♦ 32k
3
votes
1
answer
456
views
1
answer
Converting HGNC to ensembl and entrez id's using biomart
R biomart written 5 months ago by akansha.gitanjali • 20 • updated 5 months ago by Kevin Blighe ♦ 69k
1
vote
1
answer
239
views
1
answer
Geneid between regions of chromosome
ensembl biomart vep geneid written 5 months ago by devarora • 290 • updated 5 months ago by Ben_Ensembl • 1.6k
1
vote
1
answer
223
views
1
answer
biomaRt search for a list of values [dplyr + column(s)]
ensembl biomart written 5 months ago by deepue • 130 • updated 5 months ago by rpolicastro ♦ 3.2k
6
votes
0
answers
354
views
0
answers
Get the location of a promoter from a gene
gene R bioconductor biomart written 6 months ago by Will Yam • 10
2
votes
1
answer
163
views
1
answer
Gene symbol of chinese hamster
R biomart written 6 months ago by rykerklie7 • 10 • updated 6 months ago by Jean-Karim Heriche ♦ 24k
19
votes
3
answers
25k
views
10 follow
3
answers
Biomart Bioconductor - Retrieving All Entrezgenes Of Hsapiens_Gene_Ensembl
R biomart bioconductor written 8.5 years ago by sthait • 100 • updated 6 months ago by Thind amarinder • 110
2
votes
0
answers
236
views
0
answers
How to obtain the chromosomal location for a list of 8M SNPs?
vcf R biomart snp ensembl written 6 months ago by aroso491 • 0
0
votes
0
answers
164
views
0
answers
RDAVIDWebService Package Official Gene Symbol IDs in GO Functional Annotation Charts
R biomart gene ontology rdavidwebservice goterm written 6 months ago by ra711 • 0
2
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0
answers
223
views
0
answers
Finding subcellular localization of genes using biomaRt - filter not found
R biomart written 6 months ago by andyincolorado • 0
0
votes
0
answers
226
views
0
answers
Creating TxDB objects from different sources
genome annotation txdb biomart ensembl written 6 months ago by mickey_95 • 30
0
votes
0
answers
176
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0
answers
Unable to convert GTEx v8 ensemble gene id+version to gene names using biomart
ensembl biomart gtex written 6 months ago by pcmph • 10 • updated 6 months ago by geek_y ♦ 11k
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