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<prev • 299 results • page 1 of 10 • next >
3
votes
1
answer
925
views
1
answer
How to annotate positions using biomaRt R package?
R biomart bioinformatics written 2.6 years ago by abc • 30 • updated 1 day ago by RamRS ♦ 17k
1
vote
2
answers
3.3k
views
2
answers
Deseq2 gene name annotation
ensembl biomart gene symbol rna-seq deseq1 written 3.1 years ago by BM • 10 • updated 3 days ago by zx8754 ♦ 5.0k
3
votes
0
answers
65
views
0
answers
ClusterProfiler cannot map any gene
biomart clusterprofiler ensemblids written 4 days ago by nazaninhoseinkhan • 270
2
votes
2
answers
111
views
5 follow
2
answers
Trying to add ensembl_transcript_id using Biomart
rnaseq biomart written 5 days ago by sandKings • 10 • updated 5 days ago by krushnach80 • 370
19
votes
2
answers
1.6k
views
2
answers
Biomart Vs Amigo
gene biomart written 8.1 years ago by Mike Dewar • 1.5k • updated 8 days ago by RamRS ♦ 17k
5
votes
2
answers
880
views
7 follow
2
answers
Difference between GO.db, biomaRt, and org.Hs.eg.db in GO annotations
R biomart go go.db written 9 months ago by lihaone • 10 • updated 11 days ago by Dunja • 10
16
votes
3
answers
4.1k
views
9 follow
3
answers
Gene symbol convert to Entrez ID
R biomart entrez written 15 months ago by landscape95 • 140 • updated 13 days ago by zx8754 ♦ 5.0k
16
votes
2
answers
4.3k
views
2
answers
Biomart Very Slow
R biomart written 8.3 years ago by Chris Miller ♦ 20k • updated 13 days ago by RamRS ♦ 17k
4
votes
1
answer
150
views
1
answer
How to retrieve Gene name from SNP ID using biomaRt
gene R biomart rsid snp written 16 days ago by johnS • 0 • updated 15 days ago by Kevin Blighe ♦ 28k
5
votes
1
answer
133
views
1
answer
GetBM gives controversial results
gene R bioconductor biomart written 16 days ago by lizaveta • 0
5
votes
1
answer
2.2k
views
1
answer
Accessing Cyanobase With The Biomart / Getbm Method
R biomart written 8.5 years ago by John • 750 • updated 16 days ago by RamRS ♦ 17k
27
votes
7
answers
7.2k
views
7 follow
7
answers
How To Detect And Query Poly-Allelic Snps?
biomart allele dbsnp snp written 8.5 years ago by Michael Dondrup ♦ 44k • updated 16 days ago by RamRS ♦ 17k
2
votes
1
answer
155
views
1
answer
What is the difference between this Biomart Code, Org.Hs.Db code and SQL code?
R biomart gene ontology entrez sql written 16 days ago by sinifdosyalari12h • 10 • updated 16 days ago by Jean-Karim Heriche ♦ 16k
18
votes
5
answers
4.7k
views
5 follow
5
answers
Anyone Using "Biomart + Java Web Services" ?
biomart webservice java written 8.5 years ago by Pierre Lindenbaum ♦ 112k • updated 16 days ago by RamRS ♦ 17k
1
vote
1
answer
112
views
1
answer
Biomart package listFilter function with with_mirbase vs other mir information
R biomart written 25 days ago by landscape95 • 140 • updated 25 days ago by Mike Smith • 850
2
votes
1
answer
154
views
1
answer
Transcript biotypes for ncRNA in GRCh37 using biomaRt?
grch37 biomart biotype transcripts ncrna written 5 weeks ago by Sergio Martínez Cuesta • 50 • updated 5 weeks ago by Emily_Ensembl ♦ 15k
4
votes
1
answer
131
views
1
answer
Mapping probe id's to gene symbols
genesymbols annotate biomart mapping probeid written 5 weeks ago by bio94 • 40 • updated 5 weeks ago by Emily_Ensembl ♦ 15k
9
votes
2
answers
269
views
6 follow
2
answers
Mapping Ensembl IDs to Entrez - Merge data frames
biomart rna-seq written 7 weeks ago by rin • 20
4
votes
1
answer
314
views
6 follow
1
answer
Affymetrix Human Genome U133 Plus 2.0 Array - probe annotation with biomaRt
R biomart written 9 weeks ago by sujasubramanian • 30 • updated 8 weeks ago by zx8754 ♦ 5.0k
5
votes
1
answer
195
views
1
answer
biomaRt rnorvegicus_gene_ensembl dataset is not valid!
biomart written 10 weeks ago by biocyberman • 760 • updated 10 weeks ago by Mike Smith • 850
1
vote
1
answer
251
views
1
answer
How to get a nucleotide at a specified position using a GenBank chromosome accession ID with biomaRt?
R biomart bioconductor genbank accession id written 11 weeks ago by foxdie • 0
0
votes
0
answers
192
views
0
answers
Affymetrix Human Genome U133 Plus 2.0 Array
R biomart written 11 weeks ago by sujasubramanian • 30 • updated 11 weeks ago by zx8754 ♦ 5.0k
0
votes
1
answer
162
views
1
answer
Ensembl biomaRt down
ensembl biomart written 11 weeks ago by sergio.artsc • 0 • updated 11 weeks ago by genomax ♦ 55k
3
votes
1
answer
111
views
1
answer
amino acid alteration position for SNPs using biomart
snps locations biomart aminoacids written 12 weeks ago by tarek.mohamed • 180 • updated 12 weeks ago by b.nota ♦ 4.9k
16
votes
3
answers
294
views
6 follow
3
answers
Obtaining rsIDs using BiomaRt or linux
R biomart snps rsid bed written 12 weeks ago by camerond • 10 • updated 12 weeks ago by Pierre Lindenbaum ♦ 112k
2
votes
1
answer
154
views
1
answer
How to avoid annotating multiple genes to a single CpG locus?
tcgabiolinks R biomart dna annotation written 3 months ago by mathias.heydt • 80 • updated 3 months ago by Mike Smith • 850
2
votes
1
answer
879
views
1
answer
BioMart dataset for S pombe
s. pombe R biomart genomicfeatures bioconductor written 20 months ago by cl10101 • 40 • updated 3 months ago by WouterDeCoster ♦ 32k
4
votes
1
answer
1.6k
views
1
answer
How to query sequences from reference genome with R?
latest biomart R written 2.9 years ago by amir.jebelli • 50 • updated 3 months ago by Biostar ♦♦ 20
13
votes
4
answers
5.1k
views
5 follow
4
answers
Annotation Of Affymetrix Human Exon St. 1.0
annotation biomart exon microarray affymetrix written 7.5 years ago by Some • 40 • updated 3 months ago by popantrop • 20
4
votes
1
answer
172
views
1
answer
How to deal with rsIDs that not include in dbSNP
biomart snp written 3 months ago by Huichen03 • 10 • updated 3 months ago by Emily_Ensembl ♦ 15k
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