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<prev • 212 results • page 1 of 8 • next >
8
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2
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Can I Get An All Uppercase Dna Sequence From Bio::Seq Without Uc?
perl bioperl written 8.4 years ago by Flies • 100 • updated 3 days ago by Biostar ♦♦ 20
0
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0
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194
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0
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How to modify the header of a perl script to use bioperl in the environment?
perlscript bioperl written 3 months ago by saadleeshehreen • 60
5
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1
answer
222
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1
answer
about bioperl script for extracting sequences from a fasta file(get orf output file) with ids which has less than 30 amino acids
python bioperl rna-seq written 4 months ago by yaminivadapally • 0 • updated 4 months ago by Nitin Narwade • 380
2
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1
answer
350
views
1
answer
Count the number of sequences in fasta file using perl
perl bioinformatics bioperl fasta written 5 months ago by koushikayaluri • 20 • updated 5 months ago by ivan.antonov • 50
20
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2
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3.0k
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2
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Perl Script - For 3Rd Codon G Or C ?
perl codon sequence bioperl translation written 8.6 years ago by Ads-Osu • 60 • updated 5 months ago by RamRS ♦ 20k
11
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3
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5 follow
3
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How Can I Save Bioperl Sequence Nested Features In Genbank Or Embl Format?
data sequence bioperl written 8.8 years ago by Ryan Thompson • 3.4k • updated 5 months ago by RamRS ♦ 20k
2
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1
answer
1.8k
views
1
answer
Ensembl Compara Perl Api Taxon->Classification Error
perl ensembl api bioperl written 8.8 years ago by Cassj • 1.3k • updated 5 months ago by RamRS ♦ 20k
78
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10
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17 follow
10
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Perl Or Python For Comparative Genomics?
python bioperl biopython comparative written 8.4 years ago by Dave Lunt • 2.0k • updated 8 months ago by biokoala ♦ 3.6k
0
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1
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1.1k
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1
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Install bioperl module Bio::DB::Sam on Ubuntu 17.10
software error bioperl written 10 months ago by marongiu.luigi • 360 • updated 10 months ago by h.mon ♦ 23k
0
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0
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312
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0
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bioperl fasta indexing problem with non model genome sequence
mrna fasta bioperl reference index written 11 months ago by shreyasibiswas88 • 30
6
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3
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3.3k
views
3
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Find Sequences In Fasta File From List Of Id'S
bioperl biopython written 5.9 years ago by arronslacey • 230 • updated 12 months ago by santhoshhegde278 • 0
2
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0
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489
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0
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News: Community Feedback - OBF mailing list issues
bioperl biopython biojava news emboss bioruby written 14 months ago by Chris Fields • 2.0k
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1
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2.8k
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1
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[Solved] Exception: Bio::Root::Exception When Using Sma3S For Annotation
annotation bioperl written 5.6 years ago by lzsph • 70 • updated 15 months ago by Biostar ♦♦ 20
2
votes
1
answer
511
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1
answer
How to change Bioperl's Bio::SeqIO default sequence folding?
fasta fastq bioperl written 17 months ago by predeus • 820 • updated 17 months ago by Chris Fields • 2.0k
4
votes
1
answer
2.3k
views
1
answer
Extract Tree Topology From Ncbi Taxonomy Database
taxonomy bioperl written 6.3 years ago by Lhl • 730 • updated 18 months ago by Biostar ♦♦ 20
0
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0
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448
views
0
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Bioperl - how can i print first result of result sequence per iteration?
ncbi protein sequence bioperl query written 19 months ago by Xylanaser • 10 • updated 19 months ago by Neilfws ♦ 48k
0
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1
answer
623
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1
answer
bioperl MapTiling error
bioperl blast written 2.0 years ago by Shyam • 130 • updated 19 months ago by Mark A. Jensen • 0
0
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1
answer
679
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1
answer
Perl script to retrieve species name from Swissprot
swissprot bioperl written 19 months ago by anicet.ebou • 140 • updated 19 months ago by Elisabeth Gasteiger • 1.5k
0
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0
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499
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0
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Using Bio::SeqIO to write with fasta format
fasta bioperl written 19 months ago by mahmood.nt • 0
1
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2
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2
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Extracting 100bp flanking sites around aligned sequences from BLAST results using Biopython or Bioperl?
bioperl biopython written 19 months ago by rmartson • 10 • updated 19 months ago by jrj.healey ♦ 10k
2
votes
1
answer
551
views
1
answer
Get number of hits programatically for a advanced query search in UniprotKb
sequence retrieval uniprotkb bioperl biopython written 22 months ago by sr_karmarkar • 0 • updated 22 months ago by Elisabeth Gasteiger • 1.5k
2
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1
answer
579
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1
answer
bioperl Bio::SeqIO join + complement weirdness
bioperl written 22 months ago by Stephane Plaisance • 380
7
votes
1
answer
655
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5 follow
1
answer
Append two fasta sequences
fasta bioperl biopython written 23 months ago by tarakaramji • 10 • updated 23 months ago by Pierre Lindenbaum ♦ 116k
2
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2
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4.1k
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5 follow
2
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How To Write Sequences To Fasta Format With No Linebreaks (Wide Format) Using Bioperl
perl fasta bioperl written 6.0 years ago by angel.roey • 0 • updated 23 months ago by Biostar ♦♦ 20
0
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0
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495
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comparative genomic analysis to obtain current status of each fungal genome existing databases and to analysis and differentiate between pathogen and endophyte in the existing fungal databases
fungi bioperl biopython pathogen endophyte written 23 months ago by shivkumar4589 • 10
6
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1
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1
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How to get ambiguous sequence from ABIF file with perl ?
perl sequence bioperl abif ambiguous written 23 months ago by jawhar.saks • 10 • updated 23 months ago by Callum Humphreys • 0
1
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1
answer
981
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1
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Bio::Tools::Run::RemoteBlast Error: 403 Forbidden
bioperl written 2.2 years ago by rplana6 • 0 • updated 24 months ago by jyotilakhanimgsu • 10
0
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2
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872
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2
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Align a position weight matrix against a sequence by using bioperl
position weight matrix pwm alignment bioperl written 2.3 years ago by francisco.abad • 0
0
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0
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1.1k
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0
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How do I get Genbank files by using wiki gene ids in bioperl?
bioperl genbank written 3.7 years ago by anp375 • 140 • updated 2.3 years ago by Biostar ♦♦ 20
12
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1
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3.9k
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1
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Tutorial: How To Install BioPerl Without Root Privileges in Ubuntu/Linxu
tutorial bioperl written 2.7 years ago by Shicheng Guo • 7.4k
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