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<prev • 214 results • page 1 of 8 • next >
7
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4
answers
7.0k
views
7 follow
4
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Error In Sam To Bam Conversion
next-gen samtools perl rnaseq bioinformatics bioperl written 6.3 years ago by SK • 110 • updated 10 days ago by vivekr • 10
1
vote
0
answers
119
views
0
answers
VelvetOptimiser fails to operate
assembly bioperl written 4 weeks ago by El Niño • 10 • updated 28 days ago by h.mon ♦ 26k
2
votes
2
answers
3.0k
views
2
answers
Genbank To Fasta Conversion
bioperl written 6.2 years ago by shilpy • 10 • updated 28 days ago by Biostar ♦♦ 20
7
votes
3
answers
2.4k
views
6 follow
3
answers
Extract Tree Topology From Ncbi Taxonomy Database
taxonomy bioperl written 6.6 years ago by Lhl • 730 • updated 4 weeks ago by peterlageweg603 • 0
0
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1
answer
2.0k
views
1
answer
BioPerl script getting hung up and running very slowly.
dn/ds bioperl rna-seq written 4.9 years ago by ddusan1 • 50 • updated 3 months ago by Biostar ♦♦ 20
3
votes
1
answer
152
views
1
answer
How to alter the program to a universal format converter
perl bioseq format converter bioperl written 3 months ago by Mimmi Ahlmén • 10 • updated 3 months ago by JC ♦ 7.9k
8
votes
2
answers
2.2k
views
2
answers
Can I Get An All Uppercase Dna Sequence From Bio::Seq Without Uc?
perl bioperl written 8.8 years ago by Flies • 100 • updated 4 months ago by Biostar ♦♦ 20
0
votes
0
answers
339
views
0
answers
How to modify the header of a perl script to use bioperl in the environment?
perlscript bioperl written 8 months ago by saadleeshehreen • 60
5
votes
1
answer
337
views
1
answer
about bioperl script for extracting sequences from a fasta file(get orf output file) with ids which has less than 30 amino acids
python bioperl rna-seq written 8 months ago by yaminivadapally • 0 • updated 8 months ago by Nitin Narwade • 400
4
votes
1
answer
646
views
1
answer
Count the number of sequences in fasta file using perl
perl bioinformatics bioperl fasta written 9 months ago by koushikayaluri • 20 • updated 9 months ago by ivan.antonov • 70
20
votes
2
answers
3.1k
views
2
answers
Perl Script - For 3Rd Codon G Or C ?
perl codon sequence bioperl translation written 9.0 years ago by Ads-Osu • 60 • updated 9 months ago by RamRS ♦ 22k
11
votes
3
answers
4.5k
views
5 follow
3
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How Can I Save Bioperl Sequence Nested Features In Genbank Or Embl Format?
data sequence bioperl written 9.2 years ago by Ryan Thompson • 3.4k • updated 9 months ago by RamRS ♦ 22k
2
votes
1
answer
1.9k
views
1
answer
Ensembl Compara Perl Api Taxon->Classification Error
perl ensembl api bioperl written 9.2 years ago by Cassj • 1.3k • updated 9 months ago by RamRS ♦ 22k
78
votes
10
answers
12k
views
17 follow
10
answers
Perl Or Python For Comparative Genomics?
python bioperl biopython comparative written 8.7 years ago by Dave Lunt • 2.0k • updated 13 months ago by Vijay Lakhujani ♦ 4.2k
0
votes
1
answer
1.5k
views
1
answer
Install bioperl module Bio::DB::Sam on Ubuntu 17.10
software error bioperl written 14 months ago by marongiu.luigi • 380 • updated 14 months ago by h.mon ♦ 26k
0
votes
0
answers
387
views
0
answers
bioperl fasta indexing problem with non model genome sequence
mrna fasta bioperl reference index written 15 months ago by shreyasibiswas88 • 30
6
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3
answers
3.6k
views
3
answers
Find Sequences In Fasta File From List Of Id'S
bioperl biopython written 6.2 years ago by arronslacey • 240 • updated 16 months ago by santhoshhegde278 • 0
2
votes
0
answers
570
views
0
answers
News: Community Feedback - OBF mailing list issues
bioperl biopython biojava news emboss bioruby written 18 months ago by Chris Fields • 2.1k
1
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1
answer
2.9k
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1
answer
[Solved] Exception: Bio::Root::Exception When Using Sma3S For Annotation
annotation bioperl written 6.0 years ago by lzsph • 70 • updated 19 months ago by Biostar ♦♦ 20
2
votes
1
answer
586
views
1
answer
How to change Bioperl's Bio::SeqIO default sequence folding?
fasta fastq bioperl written 22 months ago by predeus • 1.1k • updated 22 months ago by Chris Fields • 2.1k
0
votes
0
answers
540
views
0
answers
Bioperl - how can i print first result of result sequence per iteration?
ncbi protein sequence bioperl query written 23 months ago by Xylanaser • 10 • updated 23 months ago by Neilfws ♦ 48k
0
votes
1
answer
680
views
1
answer
bioperl MapTiling error
bioperl blast written 2.3 years ago by Shyam • 130 • updated 23 months ago by Mark A. Jensen • 0
0
votes
1
answer
784
views
1
answer
Perl script to retrieve species name from Swissprot
swissprot bioperl written 24 months ago by anicet.ebou • 140 • updated 23 months ago by Elisabeth Gasteiger • 1.6k
0
votes
0
answers
595
views
0
answers
Using Bio::SeqIO to write with fasta format
fasta bioperl written 24 months ago by mahmood.nt • 0
1
vote
2
answers
1.1k
views
2
answers
Extracting 100bp flanking sites around aligned sequences from BLAST results using Biopython or Bioperl?
bioperl biopython written 24 months ago by rmartson • 20 • updated 24 months ago by jrj.healey ♦ 12k
2
votes
1
answer
598
views
1
answer
Get number of hits programatically for a advanced query search in UniprotKb
sequence retrieval uniprotkb bioperl biopython written 2.2 years ago by sr_karmarkar • 0 • updated 2.2 years ago by Elisabeth Gasteiger • 1.6k
2
votes
1
answer
660
views
1
answer
bioperl Bio::SeqIO join + complement weirdness
bioperl written 2.2 years ago by Stephane Plaisance • 400
7
votes
1
answer
758
views
5 follow
1
answer
Append two fasta sequences
fasta bioperl biopython written 2.2 years ago by tarakaramji • 10 • updated 2.2 years ago by Pierre Lindenbaum ♦ 121k
2
votes
2
answers
4.4k
views
5 follow
2
answers
How To Write Sequences To Fasta Format With No Linebreaks (Wide Format) Using Bioperl
perl fasta bioperl written 6.3 years ago by angel.roey • 0 • updated 2.2 years ago by Biostar ♦♦ 20
0
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0
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559
views
0
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comparative genomic analysis to obtain current status of each fungal genome existing databases and to analysis and differentiate between pathogen and endophyte in the existing fungal databases
fungi bioperl biopython pathogen endophyte written 2.3 years ago by shivkumar4589 • 10
<prev • 214 results • page 1 of 8 • next >
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