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<prev • 217 results • page 1 of 8 • next >
1
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1
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177
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1
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Installing BioPerl and using Bio/SeqIO.pm
ucsc genome browser bioperl seqio written 8 weeks ago by ccpowell • 0
4
votes
1
answer
178
views
1
answer
Attempting to setup snakemake on a compute cluster
wgs bacdist bioperl conda snakemake written 3 months ago by mattisknulst • 20 • updated 3 months ago by malteherold • 60
3
votes
0
answers
1.5k
views
0
answers
Bioperl Sirna Design
bioperl written 9.1 years ago by User 3992 • 10 • updated 4 months ago by Biostar ♦♦ 20
3
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2
answers
2.6k
views
2
answers
Bioperl Retrieve Fasta Sequence With Colon In Header
perl fasta bioperl written 7.6 years ago by jason.r.gallant • 10 • updated 6 months ago by Biostar ♦♦ 20
0
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0
answers
174
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0
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Control concatenation order in a fasta file
bioperl written 7 months ago by Damian_Civ • 0 • updated 7 months ago by RamRS ♦ 27k
7
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4
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7.7k
views
7 follow
4
answers
Error In Sam To Bam Conversion
next-gen samtools perl rnaseq bioinformatics bioperl written 7.4 years ago by SK • 110 • updated 13 months ago by vivekr • 10
1
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0
answers
468
views
0
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VelvetOptimiser fails to operate
assembly bioperl written 13 months ago by El Niño • 10 • updated 13 months ago by h.mon ♦ 30k
2
votes
2
answers
3.4k
views
2
answers
Genbank To Fasta Conversion
bioperl written 7.3 years ago by shilpy • 20 • updated 13 months ago by Biostar ♦♦ 20
7
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3
answers
2.7k
views
6 follow
3
answers
Extract Tree Topology From Ncbi Taxonomy Database
taxonomy bioperl written 7.7 years ago by Lhl • 730 • updated 13 months ago by peterlageweg603 • 10
0
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1
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2.3k
views
1
answer
BioPerl script getting hung up and running very slowly.
dn/ds bioperl rna-seq written 6.0 years ago by ddusan1 • 50 • updated 16 months ago by Biostar ♦♦ 20
3
votes
1
answer
377
views
1
answer
How to alter the program to a universal format converter
perl bioseq format converter bioperl written 16 months ago by Mimmi Ahlmén • 20 • updated 16 months ago by JC ♦ 10k
8
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2
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2.5k
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2
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Can I Get An All Uppercase Dna Sequence From Bio::Seq Without Uc?
perl bioperl written 9.8 years ago by Flies • 100 • updated 16 months ago by Biostar ♦♦ 20
0
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0
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955
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0
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How to modify the header of a perl script to use bioperl in the environment?
perlscript bioperl written 20 months ago by saadleeshehreen • 70
5
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1
answer
575
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1
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about bioperl script for extracting sequences from a fasta file(get orf output file) with ids which has less than 30 amino acids
python bioperl rna-seq written 21 months ago by yaminivadapally • 0 • updated 21 months ago by Nitin Narwade • 450
4
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1
answer
1.4k
views
1
answer
Count the number of sequences in fasta file using perl
perl bioinformatics bioperl fasta written 21 months ago by koushikayaluri • 20 • updated 21 months ago by ivan.antonov • 90
20
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2
answers
3.4k
views
2
answers
Perl Script - For 3Rd Codon G Or C ?
perl codon sequence bioperl translation written 10.0 years ago by Ads-Osu • 60 • updated 22 months ago by RamRS ♦ 27k
11
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3
answers
5.0k
views
5 follow
3
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How Can I Save Bioperl Sequence Nested Features In Genbank Or Embl Format?
data sequence bioperl written 10.2 years ago by Ryan Thompson • 3.4k • updated 22 months ago by RamRS ♦ 27k
2
votes
1
answer
2.2k
views
1
answer
Ensembl Compara Perl Api Taxon->Classification Error
perl ensembl api bioperl written 10.2 years ago by Cassj • 1.3k • updated 22 months ago by RamRS ♦ 27k
78
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10
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12k
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17 follow
10
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Perl Or Python For Comparative Genomics?
python bioperl biopython comparative written 9.8 years ago by Dave Lunt • 2.0k • updated 2.1 years ago by lakhujanivijay ♦ 5.1k
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1
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2.5k
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1
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Install bioperl module Bio::DB::Sam on Ubuntu 17.10
software error bioperl written 2.2 years ago by marongiu.luigi • 520 • updated 2.2 years ago by h.mon ♦ 30k
0
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0
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583
views
0
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bioperl fasta indexing problem with non model genome sequence
mrna fasta bioperl reference index written 2.3 years ago by shreyasibiswas88 • 30
6
votes
3
answers
4.1k
views
3
answers
Find Sequences In Fasta File From List Of Id'S
bioperl biopython written 7.2 years ago by arronslacey • 270 • updated 2.4 years ago by santhoshhegde278 • 0
2
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0
answers
755
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0
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News: Community Feedback - OBF mailing list issues
bioperl biopython biojava news emboss bioruby written 2.6 years ago by Chris Fields • 2.1k
1
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1
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3.3k
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1
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[Solved] Exception: Bio::Root::Exception When Using Sma3S For Annotation
annotation bioperl written 7.0 years ago by lzsph • 70 • updated 2.6 years ago by Biostar ♦♦ 20
2
votes
1
answer
741
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1
answer
How to change Bioperl's Bio::SeqIO default sequence folding?
fasta fastq bioperl written 2.9 years ago by predeus • 1.4k • updated 2.9 years ago by Chris Fields • 2.1k
0
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0
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773
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0
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Bioperl - how can i print first result of result sequence per iteration?
ncbi protein sequence bioperl query written 3.0 years ago by Xylanaser • 60 • updated 3.0 years ago by Neilfws ♦ 48k
0
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1
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889
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1
answer
bioperl MapTiling error
bioperl blast written 3.4 years ago by Shyam • 130 • updated 3.0 years ago by Mark A. Jensen • 0
0
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1
answer
1.0k
views
1
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Perl script to retrieve species name from Swissprot
swissprot bioperl written 3.0 years ago by anicet.ebou • 160 • updated 3.0 years ago by Elisabeth Gasteiger • 1.7k
0
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0
answers
796
views
0
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Using Bio::SeqIO to write with fasta format
fasta bioperl written 3.0 years ago by mahmood.nt • 0
3
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2
answers
1.7k
views
5 follow
2
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Extracting 100bp flanking sites around aligned sequences from BLAST results using Biopython or Bioperl?
bioperl biopython written 3.0 years ago by rmartson • 30 • updated 3.0 years ago by Joe ♦ 17k
<prev • 217 results • page 1 of 8 • next >
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