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<prev • 212 results • page 1 of 8 • next >
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How to modify the header of a perl script to use bioperl in the environment?
perlscript bioperl written 26 days ago by saadleeshehreen • 40
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about bioperl script for extracting sequences from a fasta file(get orf output file) with ids which has less than 30 amino acids
python bioperl rna-seq written 7 weeks ago by yaminivadapally • 0 • updated 7 weeks ago by Nitin Narwade • 320
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Count the number of sequences in fasta file using perl
perl bioinformatics bioperl fasta written 9 weeks ago by koushikayaluri • 10 • updated 9 weeks ago by ivan.antonov • 50
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Perl Script - For 3Rd Codon G Or C ?
perl codon sequence bioperl translation written 8.4 years ago by Ads-Osu • 60 • updated 10 weeks ago by RamRS ♦ 19k
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How Can I Save Bioperl Sequence Nested Features In Genbank Or Embl Format?
data sequence bioperl written 8.6 years ago by Ryan Thompson • 3.4k • updated 10 weeks ago by RamRS ♦ 19k
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1
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Ensembl Compara Perl Api Taxon->Classification Error
perl ensembl api bioperl written 8.6 years ago by Cassj • 1.3k • updated 10 weeks ago by RamRS ♦ 19k
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17 follow
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Perl Or Python For Comparative Genomics?
python bioperl biopython comparative written 8.1 years ago by Dave Lunt • 2.0k • updated 5 months ago by Vijay Lakhujani ♦ 3.2k
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Install bioperl module Bio::DB::Sam on Ubuntu 17.10
software error bioperl written 7 months ago by marongiu.luigi • 340 • updated 7 months ago by h.mon ♦ 21k
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bioperl fasta indexing problem with non model genome sequence
mrna fasta bioperl reference index written 8 months ago by shreyasibiswas88 • 30
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Find Sequences In Fasta File From List Of Id'S
bioperl biopython written 5.6 years ago by arronslacey • 230 • updated 9 months ago by santhoshhegde278 • 0
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News: Community Feedback - OBF mailing list issues
bioperl biopython biojava news emboss bioruby written 11 months ago by Chris Fields • 1.9k
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[Solved] Exception: Bio::Root::Exception When Using Sma3S For Annotation
annotation bioperl written 5.4 years ago by lzsph • 70 • updated 12 months ago by Biostar ♦♦ 20
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How to change Bioperl's Bio::SeqIO default sequence folding?
fasta fastq bioperl written 14 months ago by predeus • 690 • updated 14 months ago by Chris Fields • 1.9k
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1
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Extract Tree Topology From Ncbi Taxonomy Database
taxonomy bioperl written 6.0 years ago by Lhl • 730 • updated 15 months ago by Biostar ♦♦ 20
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Bioperl - how can i print first result of result sequence per iteration?
ncbi protein sequence bioperl query written 16 months ago by Xylanaser • 10 • updated 16 months ago by Neilfws ♦ 48k
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bioperl MapTiling error
bioperl blast written 21 months ago by Shyam • 120 • updated 16 months ago by Mark A. Jensen • 0
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Perl script to retrieve species name from Swissprot
swissprot bioperl written 16 months ago by anicet.ebou • 130 • updated 16 months ago by Elisabeth Gasteiger • 1.5k
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Using Bio::SeqIO to write with fasta format
fasta bioperl written 16 months ago by mahmood.nt • 0
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Extracting 100bp flanking sites around aligned sequences from BLAST results using Biopython or Bioperl?
bioperl biopython written 16 months ago by rmartson • 10 • updated 16 months ago by jrj.healey ♦ 8.8k
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Get number of hits programatically for a advanced query search in UniprotKb
sequence retrieval uniprotkb bioperl biopython written 19 months ago by sr_karmarkar • 0 • updated 19 months ago by Elisabeth Gasteiger • 1.5k
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bioperl Bio::SeqIO join + complement weirdness
bioperl written 19 months ago by Stephane Plaisance • 370
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5 follow
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Append two fasta sequences
fasta bioperl biopython written 20 months ago by tarakaramji • 10 • updated 20 months ago by Pierre Lindenbaum ♦ 114k
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How To Write Sequences To Fasta Format With No Linebreaks (Wide Format) Using Bioperl
perl fasta bioperl written 5.7 years ago by angel.roey • 0 • updated 20 months ago by Biostar ♦♦ 20
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comparative genomic analysis to obtain current status of each fungal genome existing databases and to analysis and differentiate between pathogen and endophyte in the existing fungal databases
fungi bioperl biopython pathogen endophyte written 20 months ago by shivkumar4589 • 10
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How to get ambiguous sequence from ABIF file with perl ?
perl sequence bioperl abif ambiguous written 21 months ago by jawhar.saks • 10 • updated 20 months ago by Callum Humphreys • 0
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Bio::Tools::Run::RemoteBlast Error: 403 Forbidden
bioperl written 24 months ago by rplana6 • 0 • updated 21 months ago by jyotilakhanimgsu • 10
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Align a position weight matrix against a sequence by using bioperl
position weight matrix pwm alignment bioperl written 2.0 years ago by francisco.abad • 0
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How do I get Genbank files by using wiki gene ids in bioperl?
bioperl genbank written 3.5 years ago by anp375 • 140 • updated 2.0 years ago by Biostar ♦♦ 20
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Tutorial: How To Install BioPerl Without Root Privileges in Ubuntu/Linxu
tutorial bioperl written 2.5 years ago by Shicheng Guo • 7.1k
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bio::db::sam installation error
bioperl samtools written 2.2 years ago by ramesh.8v • 200 • updated 2.2 years ago by Charles Plessy • 2.6k
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