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<prev • 215 results • page 1 of 8 • next >
3
votes
0
answers
1.4k
views
0
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Bioperl Sirna Design
bioperl written 8.8 years ago by User 3992 • 10 • updated 4 days ago by Biostar ♦♦ 20
3
votes
2
answers
2.5k
views
2
answers
Bioperl Retrieve Fasta Sequence With Colon In Header
perl fasta bioperl written 7.2 years ago by jason.r.gallant • 10 • updated 8 weeks ago by Biostar ♦♦ 20
0
votes
0
answers
108
views
0
answers
Control concatenation order in a fasta file
bioperl written 12 weeks ago by Damian_Civ • 0 • updated 12 weeks ago by RamRS ♦ 25k
7
votes
4
answers
7.5k
views
7 follow
4
answers
Error In Sam To Bam Conversion
next-gen samtools perl rnaseq bioinformatics bioperl written 7.0 years ago by SK • 110 • updated 8 months ago by vivekr • 10
1
vote
0
answers
328
views
0
answers
VelvetOptimiser fails to operate
assembly bioperl written 9 months ago by El Niño • 10 • updated 9 months ago by h.mon ♦ 29k
2
votes
2
answers
3.2k
views
2
answers
Genbank To Fasta Conversion
bioperl written 6.9 years ago by shilpy • 10 • updated 9 months ago by Biostar ♦♦ 20
7
votes
3
answers
2.6k
views
6 follow
3
answers
Extract Tree Topology From Ncbi Taxonomy Database
taxonomy bioperl written 7.3 years ago by Lhl • 730 • updated 9 months ago by peterlageweg603 • 10
0
votes
1
answer
2.2k
views
1
answer
BioPerl script getting hung up and running very slowly.
dn/ds bioperl rna-seq written 5.6 years ago by ddusan1 • 50 • updated 11 months ago by Biostar ♦♦ 20
3
votes
1
answer
314
views
1
answer
How to alter the program to a universal format converter
perl bioseq format converter bioperl written 12 months ago by Mimmi Ahlmén • 10 • updated 12 months ago by JC ♦ 9.5k
8
votes
2
answers
2.4k
views
2
answers
Can I Get An All Uppercase Dna Sequence From Bio::Seq Without Uc?
perl bioperl written 9.4 years ago by Flies • 100 • updated 12 months ago by Biostar ♦♦ 20
0
votes
0
answers
688
views
0
answers
How to modify the header of a perl script to use bioperl in the environment?
perlscript bioperl written 16 months ago by saadleeshehreen • 70
5
votes
1
answer
509
views
1
answer
about bioperl script for extracting sequences from a fasta file(get orf output file) with ids which has less than 30 amino acids
python bioperl rna-seq written 17 months ago by yaminivadapally • 0 • updated 17 months ago by Nitin Narwade • 440
4
votes
1
answer
1.1k
views
1
answer
Count the number of sequences in fasta file using perl
perl bioinformatics bioperl fasta written 17 months ago by koushikayaluri • 20 • updated 17 months ago by ivan.antonov • 80
20
votes
2
answers
3.3k
views
2
answers
Perl Script - For 3Rd Codon G Or C ?
perl codon sequence bioperl translation written 9.6 years ago by Ads-Osu • 60 • updated 17 months ago by RamRS ♦ 25k
11
votes
3
answers
4.9k
views
5 follow
3
answers
How Can I Save Bioperl Sequence Nested Features In Genbank Or Embl Format?
data sequence bioperl written 9.8 years ago by Ryan Thompson • 3.4k • updated 17 months ago by RamRS ♦ 25k
2
votes
1
answer
2.1k
views
1
answer
Ensembl Compara Perl Api Taxon->Classification Error
perl ensembl api bioperl written 9.9 years ago by Cassj • 1.3k • updated 17 months ago by RamRS ♦ 25k
78
votes
10
answers
12k
views
17 follow
10
answers
Perl Or Python For Comparative Genomics?
python bioperl biopython comparative written 9.4 years ago by Dave Lunt • 2.0k • updated 21 months ago by lakhujanivijay ♦ 4.8k
0
votes
1
answer
2.1k
views
1
answer
Install bioperl module Bio::DB::Sam on Ubuntu 17.10
software error bioperl written 22 months ago by marongiu.luigi • 460 • updated 22 months ago by h.mon ♦ 29k
0
votes
0
answers
522
views
0
answers
bioperl fasta indexing problem with non model genome sequence
mrna fasta bioperl reference index written 23 months ago by shreyasibiswas88 • 30
6
votes
3
answers
3.9k
views
3
answers
Find Sequences In Fasta File From List Of Id'S
bioperl biopython written 6.9 years ago by arronslacey • 260 • updated 2.1 years ago by santhoshhegde278 • 0
2
votes
0
answers
699
views
0
answers
News: Community Feedback - OBF mailing list issues
bioperl biopython biojava news emboss bioruby written 2.2 years ago by Chris Fields • 2.1k
1
vote
1
answer
3.2k
views
1
answer
[Solved] Exception: Bio::Root::Exception When Using Sma3S For Annotation
annotation bioperl written 6.7 years ago by lzsph • 70 • updated 2.3 years ago by Biostar ♦♦ 20
2
votes
1
answer
685
views
1
answer
How to change Bioperl's Bio::SeqIO default sequence folding?
fasta fastq bioperl written 2.5 years ago by predeus • 1.3k • updated 2.5 years ago by Chris Fields • 2.1k
0
votes
0
answers
697
views
0
answers
Bioperl - how can i print first result of result sequence per iteration?
ncbi protein sequence bioperl query written 2.6 years ago by Xylanaser • 50 • updated 2.6 years ago by Neilfws ♦ 48k
0
votes
1
answer
821
views
1
answer
bioperl MapTiling error
bioperl blast written 3.0 years ago by Shyam • 130 • updated 2.6 years ago by Mark A. Jensen • 0
0
votes
1
answer
960
views
1
answer
Perl script to retrieve species name from Swissprot
swissprot bioperl written 2.7 years ago by anicet.ebou • 160 • updated 2.6 years ago by Elisabeth Gasteiger • 1.7k
0
votes
0
answers
739
views
0
answers
Using Bio::SeqIO to write with fasta format
fasta bioperl written 2.7 years ago by mahmood.nt • 0
2
votes
2
answers
1.5k
views
2
answers
Extracting 100bp flanking sites around aligned sequences from BLAST results using Biopython or Bioperl?
bioperl biopython written 2.7 years ago by rmartson • 20 • updated 2.7 years ago by Joe ♦ 16k
2
votes
1
answer
686
views
1
answer
Get number of hits programatically for a advanced query search in UniprotKb
sequence retrieval uniprotkb bioperl biopython written 2.9 years ago by sr_karmarkar • 0 • updated 2.9 years ago by Elisabeth Gasteiger • 1.7k
2
votes
1
answer
810
views
1
answer
bioperl Bio::SeqIO join + complement weirdness
bioperl written 2.9 years ago by Stephane Plaisance • 410
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