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Biopython restriction sites
biopython restriction eznymes written 1 day ago by neilgupte7 • 0 • updated 1 day ago by WouterDeCoster ♦ 30k
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Biopython pairwise 2 - can I make it score an existing alignment?
pairwise2 python biopython alignment score written 2 days ago by wolfgang.rumpf • 0
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Bio.Entrez.efetch return all annotated features
biopython written 10 days ago by kksaw • 0
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BioPython local blast different results than blast+ local blast
python blast biopython blast+ written 10 days ago by s.l.rinzema • 0
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10 follow
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Efficiently Iterating Over Fastq Records From Python
fasta fastq next-gen biopython python sequencing written 6.6 years ago by User 9996 • 770 • updated 16 days ago by hurfdurf • 460
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NcbiblastpCommandline , not working properly in python but commands work on console
blast biopython blastp ncbicommandline python 3.0 written 12 weeks ago by New2programming • 0 • updated 23 days ago by Biostar ♦♦ 20
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CAI in python: SeqUtils.CodonUsage vs CAI package
sequtils codon biopython cai written 7 months ago by grassostefan • 0 • updated 27 days ago by benjamindlee • 10
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Retrieve PubMed records based on some genes
gene python biopython pubmed written 28 days ago by willson • 0
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5 follow
1
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Differences in exon number from Biopython Entrez Package and ANNOVAR
annovar entrez package biopython written 29 days ago by gero.knittel • 10 • updated 29 days ago by Kevin Blighe ♦ 24k
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Parsing Swissprot With Biopython
biopython written 5.6 years ago by Stephen • 30 • updated 4 weeks ago by Biostar ♦♦ 20
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1
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BioPython BLAST Records HSP Sequences
ncbi biopython blast sequences written 4 weeks ago by samvanstroud • 0 • updated 4 weeks ago by Gungor Budak • 230
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Compare nucleotides across aligned sequences
identity similarity sequence biopython alignment written 5 weeks ago by brimaloney • 0 • updated 5 weeks ago by zx8754 ♦ 4.7k
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BLAST taxid to complete linage using biopython on a local machine.
taxonomy biopython blast parsng written 3 months ago by lp.vandergouw • 0 • updated 5 weeks ago by Biostar ♦♦ 20
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index of the residue matched using pairwise2 in biopython
pairwise python sequence biopython written 6 weeks ago by akdbharadwajiitkgp • 0 • updated 6 weeks ago by Russ • 300
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Why are some codons containing uncertainties wrongly translated in BioPython?
sequence python translation biopython written 6 weeks ago by Palming • 0
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109
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Esearch results not matching up with online results
esearch biopython entrez written 6 weeks ago by cha27cha • 0
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158
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1
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Create Seq Record(s) Object from my SORTED list!
python biopython seq record written 7 weeks ago by incensefrenzie2006 • 0
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17 follow
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Perl Or Python For Comparative Genomics?
python bioperl biopython comparative written 7.8 years ago by Dave Lunt • 2.0k • updated 7 weeks ago by Vijay Lakhujani ♦ 2.8k
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6 follow
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Handling Ranged Data In Python
python biopython R written 6.3 years ago by Abhi • 1.5k • updated 8 weeks ago by endrebak • 640
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Counting number of reads and bases fastaQ with python
fastaq python biopython written 9 weeks ago by Toto26 • 10 • updated 9 weeks ago by drkennetz • 310
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Using GFF3Writer in Biopython
gff3 ensembl gff biopython written 9 weeks ago by Alice • 230 • updated 9 weeks ago by finswimmer ♦ 3.6k
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Biopython: SeqIO.write () function to write dictionary object to fasta file
sequence biopython written 9 weeks ago by WeepingMeadow • 0
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Multiple Sequence Alignment Python
clustlw multiple sequence alignment biopython written 10 weeks ago by Manu Madhavan • 10
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197
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1
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Need Help Writing Biopython to CSV
csv schoolassignment biopython entrez written 11 weeks ago by pmramos95 • 0 • updated 11 weeks ago by Vimalkumar Velayudhan • 180
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Sequence date of Refseq genomes
genome python ref-seq biopython sequencing written 12 weeks ago by alyosamah • 0 • updated 12 weeks ago by 5heikki ♦ 7.4k
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Passing multiple fasta files to local blast
python blast alignment biopython blastp written 3 months ago by New2programming • 0
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Method for limiting sequence input into blastsearches
biopython blast written 3 months ago by paul.edward.malone • 0
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How do I get full text AND MeSH terms from Entrez on the PMC database in biopython?
python e-utilities pubmed entrez biopython written 3 months ago by Syncrossus • 0
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5 follow
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Different alignment results between Emboss Needle and Biopython pairwise2
needleman–wunsch alignment biopython written 3 months ago by markd • 20 • updated 3 months ago by a.zielezinski ♦ 8.3k
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Select records from fasta file by SeqIO (Biopython)
fasta sequence biopython seqio written 3 months ago by dmitri.ivanovsky • 0 • updated 3 months ago by a.zielezinski ♦ 8.3k
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