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<prev • 856 results • page 1 of 29 • next >
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Error during parsing PDB using Biopython.
pdb biopython written 1 day ago by reddymanvitha97 • 10 • updated 1 day ago by jrj.healey ♦ 13k
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Biopython PRANK Alignment
prank biopython written 10 days ago by catarina.tserrano • 0 • updated 10 days ago by RamRS ♦ 23k
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1
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Trying to separate different chains of a PDB file into separate files. Biopython gives an error
python biopython written 3 months ago by westin.kosater • 10 • updated 26 days ago by gabriel.flores • 0
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I Wonder Why It Is So Important To Use Seq Objects In Stead Of Plain Ol' Strings In Biopyton?
python tutorial biopython seq written 9.3 years ago by Vlinxify • 120 • updated 4 weeks ago by Biostar ♦♦ 20
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biological formats format converter script
biojava format converter sequence biopython written 4 weeks ago by shizatooba.gul • 0 • updated 4 weeks ago by Pierre Lindenbaum ♦ 122k
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How to find identity percentage of two genomes sequences stored in two variable by carrying using BLAST in biopython
gene python alignment biopython written 5 weeks ago by prittam32 • 0 • updated 5 weeks ago by ATpoint ♦ 21k
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1
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Extracting blocks features by their coordinates in a genome (using BioPython)?
biopython written 7 weeks ago by little_more • 10 • updated 6 weeks ago by vkkodali • 1.1k
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2
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Retrieve genome in fasta format from ncbi
genome ncbi biopython written 11 months ago by tim.ivanov.92 • 10 • updated 6 weeks ago by atiestorage • 0
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Error with frame/translation in BioPython?
python biopython written 6 weeks ago by alsxm9608220073 • 0 • updated 6 weeks ago by jrj.healey ♦ 13k
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SeqIO.index does not contain all records downloaded from NCBI
ncbi sequence biopython genbank written 7 weeks ago by stueckmann.daniel • 0
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123
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Mal-formed sequence line error in Bio.SeqIO
python biopython genbank written 7 weeks ago by stueckmann.daniel • 0
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187
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1
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How to apply BioPython function to every row of CSV
python csv alignment biopython written 8 weeks ago by ishackm • 70 • updated 8 weeks ago by Asaf ♦ 6.1k
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Sorting and Counting Deep-Seq reads
python next-gen biopython sequencing written 8 weeks ago by Allie J • 0
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Queries in PubMed and MEDLINE with Entrez
mesh entrez biopython medline pubmed written 9 weeks ago by pl640 • 0
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173
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1
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HTTP 400: Bad request error in Biopython Entrez.efetch
ncbi python biopython entrez sequences written 9 weeks ago by Solowars • 50
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128
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Biopython chromosome drawing with coloring
biopython written 9 weeks ago by yh362 • 30
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Creating text file as a temporary file in python
python biopython written 8 months ago by mdsiddra • 30 • updated 9 weeks ago by Biostar ♦♦ 20
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1
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1
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Clustal Omega and Biopython
phylogenetic tree biopython clustal omega msa written 10 weeks ago by oonatoyou • 10 • updated 10 weeks ago by Carambakaracho • 1.4k
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R or Biopython for Natural Product Research?
natural products biopython rstudio written 11 weeks ago by dicenhour • 0 • updated 11 weeks ago by Jean-Karim Heriche ♦ 20k
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1
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1
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ValueError("End of file without quality information.") when using SeqIO
python fastq seqio fastqgeneraliterator biopython written 11 weeks ago by Arko • 20 • updated 11 weeks ago by RamRS ♦ 23k
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1
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Fasta with multiple sequences to alignment object which can by used to build a phylogenetic tree
fasta clustal alignment biopython phylo written 12 weeks ago by mac03pat • 10 • updated 12 weeks ago by jrj.healey ♦ 13k
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1
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230
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1
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How to extract nucleotide sequence of select genes from a text file with Genbank-like format
nucleotide parse antismash biopython genbank written 12 weeks ago by mac03pat • 10 • updated 12 weeks ago by SMK • 1.8k
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How can I obtain specimen_voucher information for each accession number in a python dictionary prepared with biopython?
py genbank record biopython python written 17 months ago by sw.knudsen • 0 • updated 12 weeks ago by SMK • 1.8k
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1
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170
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1
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Biopython problem again
biopython written 12 weeks ago by psschlogl • 20 • updated 12 weeks ago by SMK • 1.8k
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1
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171
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1
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Trying to run clustalw with biopython on jupyter notebook
custalw biopython written 12 weeks ago by psschlogl • 20
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1
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306
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1
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Why can't import Biopython module when I run my scripts located in /usr/lib/cgi-bin?
biopython written 3 months ago by lhernanj • 0
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Protein Loop Rmsd Calculations
bioinformatics biopython written 5.4 years ago by mario.messih • 30 • updated 3 months ago by Biostar ♦♦ 20
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Is there a Pyinstaller hook for Biopython imports? How to package a Biopython script into executable?
python pyinstaller hook biopython import written 3 months ago by A. Kozubik • 0
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1
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185
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1
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Trying to parse the SwissProt keywlist.txt with biopython
biopython written 3 months ago by schlogl • 10
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1
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179
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1
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Did Biopython's NCBIWWW qblast suddenly stopped supporting entrez_query parameter?
entrez_query qblast biopython blast ncbiwww written 3 months ago by A. Kozubik • 0 • updated 3 months ago by zx8754 ♦ 7.9k
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