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<prev • 979 results • page 1 of 33 • next >
6
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7 follow
3
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How To Download Swiss-Prot .Dat File From Uniprot
python biopython uniprot written 7.0 years ago by kevinjspring • 20 • updated 7 hours ago by bazghazia7 • 0
1
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1
answer
107
views
1
answer
Biopython not installed correctly error when trying to call python script from R on a MacOS
biopython written 3 days ago by devarts • 10
6
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2
answers
88
views
2
answers
Biopython - AttributeError: when downloading from genbank
software error biopython written 2 days ago by Wilber0x • 10 • updated 2 days ago by Shred • 230
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0
answers
60
views
0
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Distance matrix based on the whole input alignment
python alignment biopython written 6 days ago by anasjamshed1994 • 20 • updated 5 days ago by ATpoint ♦ 40k
0
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0
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68
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0
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Why cai_for_gene method substracts one from cai_length in biopython
python biopython written 9 days ago by yamasakih • 0 • updated 7 days ago by Biostar ♦♦ 20
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43
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0
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Retrieve / Generate Naive PDB test structures for neighbor search algorithm (Biopython)
python biopython bio.pdb written 8 days ago by jonbroad15 • 0
0
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1
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75
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1
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biopython script to alingn mutiple sequences
python biopython written 10 days ago by anasjamshed1994 • 20 • updated 10 days ago by Istvan Albert ♦♦ 85k
1
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1
answer
81
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1
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Parsing SRA summary using Biopython Entrez
python entrez biopython sra xml written 14 days ago by kmyers2 • 40 • updated 14 days ago by Istvan Albert ♦♦ 85k
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0
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98
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0
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Free PMC Article access through FTP service - NCBI
ncbi entrez biopython pmc pubmed written 17 days ago by vighnesh202 • 0
0
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0
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127
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0
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error while executing panX script (KeyError: 'db_xref').
genome python linux biopython bioinformatics written 8 weeks ago by Dineshkumar K • 40 • updated 18 days ago by Biostar ♦♦ 20
0
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1
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146
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1
answer
Printing for each specific sequence and its residue in msa , every msa position
R sequence biopython alignment written 27 days ago by marin.matic • 0 • updated 27 days ago by a.zielezinski ♦ 9.2k
2
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3
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185
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5 follow
3
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How would I use BioPython to mass download some assemblies from NCBI?
ncbi biopython written 4 weeks ago by Tom • 20 • updated 4 weeks ago by genomax ♦ 91k
0
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0
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114
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0
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Error while running Jupyter script on HPC
jupyter biopython qiime2 written 5 weeks ago by Bioinfonext • 250
1
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1
answer
129
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1
answer
Retrieve Protein Sequences from Uniprot
python sequence biopython uniprot written 5 weeks ago by biohacker_tobe • 40 • updated 5 weeks ago by Shalu Jhanwar • 470
0
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0
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121
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0
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Parsing psiblast xml with BioPython
parse biopython psiblast written 6 weeks ago by effidotpy • 10
0
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0
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167
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0
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Biopython's Esearch for Pubmed does not give the same results as web search
python pubmed esearch biopython python-3.x written 7 weeks ago by zinar.yahac • 0 • updated 7 weeks ago by RamRS ♦ 30k
2
votes
2
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236
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2
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Is there a way to extract the gene product name from the CDS of a BLAST hit?
gene alignment genbank blast biopython written 9 weeks ago by didiDeee • 0 • updated 9 weeks ago by genomax ♦ 91k
0
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1
answer
114
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1
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Multi-records genbank to CDS
cds biopython genbank written 9 weeks ago by hazirliver • 10
9
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1
answer
247
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5 follow
1
answer
Indel coding in python
indel coding biopython written 9 weeks ago by adrian18_07 • 10 • updated 9 weeks ago by zx8754 ♦ 9.7k
4
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1
answer
166
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1
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How to merge exons based on gene ids?
python biopython written 9 weeks ago by akashbala0 • 10 • updated 9 weeks ago by rpolicastro • 2.1k
0
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1
answer
167
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1
answer
SeqIO error: local variable 'qual' referenced before assignment
sanger_sequence biopython seqio written 10 weeks ago by KHP • 0 • updated 10 weeks ago by Peter ♦ 5.8k
0
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0
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276
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0
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Parsing GFF with biopython throws error
gff biopython written 3 months ago by Juliofdiaz • 130 • updated 11 weeks ago by Biostar ♦♦ 20
8
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2
answers
225
views
2
answers
Python: regular expression searching error
python regular expression biopython error seqio written 11 weeks ago by jamie.pike • 60 • updated 11 weeks ago by Joe ♦ 18k
3
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1
answer
163
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1
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Are there wrappers for blastdb_aliastool, blastdbcmd in Biopython Blast module? Any alternatives?
biopython blast written 12 weeks ago by bsmith4133 • 40 • updated 11 weeks ago by Istvan Albert ♦♦ 85k
1
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0
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152
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0
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Concatenating multiple nexus file in a supermatrix using Biopython
nexus concatenation biopython written 12 weeks ago by CUCIO199 • 10
3
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1
answer
216
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1
answer
Changing output format for hamming distance of FASTA sequences (using Biopython)
fasta python hamming_distance biopython sequence written 3 months ago by nameuser • 10 • updated 12 weeks ago by Joe ♦ 18k
0
votes
0
answers
170
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0
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NCT seracchi in PubMed via Entrez (python)
python nct biopython statistics written 3 months ago by federico.nutarelli • 0 • updated 3 months ago by Joe ♦ 18k
1
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0
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316
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0
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How to convert FASTA to NEXUS in Python
fasta nexus biopython convert written 3 months ago by adrian18_07 • 10
0
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0
answers
225
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0
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'blastp' is not recognized as an internal or external command using Bio.Blast.Applications
biopython blast written 3 months ago by perstet • 0
6
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2
answers
179
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2
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Incorrect sequence retrieved by coordinates
fasta python biopython pysam written 3 months ago by Igor Filippov • 0 • updated 3 months ago by Istvan Albert ♦♦ 85k
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