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<prev • 922 results • page 1 of 31 • next >
7
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0
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88
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0
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Biopython Pairwise Alignment output
needleman biopython global alignment written 1 day ago by tommaso.green • 0
1
vote
0
answers
73
views
0
answers
Error when using blastn in biopython
biopython blastn written 1 day ago by Hood • 0
1
vote
0
answers
67
views
0
answers
Failure to extract CDS from embl file using BioPython
biopython written 6 days ago by rjqmantaring • 0
5
votes
2
answers
1.4k
views
2
answers
Update Biopython in Mac OS
biopython written 3.9 years ago by lxu2011ct • 20 • updated 6 days ago by Biostar ♦♦ 20
0
votes
0
answers
47
views
0
answers
Has someone experience with the KOBAS (v. 3) standalone enrichment software?
standalone enrichment biopython kobas kegg written 8 days ago by t.bergmann • 0
0
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0
answers
68
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0
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How to parse Genbank features "/coded_by="
biopython genbank written 9 days ago by RNAeye • 60
1
vote
0
answers
64
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0
answers
Find and Download GenBank File for Whole Genome using Entrez
ncbi python entrez genbank biopython written 11 days ago by kmyers2 • 40
0
votes
0
answers
130
views
0
answers
Trouble Finding ORFs in DNA Sequence
python biopython written 16 days ago by kmussar • 0
0
votes
0
answers
43
views
0
answers
creating genebank file using own record entries
genebank biopython seqio written 18 days ago by APJ • 30
3
votes
1
answer
59
views
1
answer
Get real model numbers from PDB using BioPython
biopython structure python2 proteins written 19 days ago by NPalopoli • 290 • updated 19 days ago by jgreener • 200
0
votes
0
answers
71
views
0
answers
design primers across the target sequence
biopython primer3 ncbi primer design seqio written 19 days ago by APJ • 30
0
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0
answers
131
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0
answers
How can I parse GFF3 using BCBio?
biopython written 8 weeks ago by radha.jg • 0 • updated 25 days ago by Biostar ♦♦ 20
0
votes
1
answer
84
views
1
answer
Question about pairwise2 in Biopython
pairwise2 biopython written 29 days ago by KHP • 0
0
votes
0
answers
129
views
0
answers
How to find positions in the alignments at which the target sequence is not identical to the consensus.
python biopython written 4 weeks ago by iCosmoso • 0
1
vote
0
answers
63
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0
answers
Sequence Extraction from MSA
alignment msa clustal omega biopython written 4 weeks ago by farheenjn • 0
0
votes
1
answer
77
views
1
answer
Biopython PairwiseAligner sorting on scores
score sequence biopython alignment written 4 weeks ago by stefan_verweij • 0 • updated 4 weeks ago by zorbax • 40
0
votes
0
answers
57
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0
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Biopyhton installation and BiasAway
biopython written 5 weeks ago by aleemu11 • 0
1
vote
0
answers
84
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0
answers
Get duplicate GO ids
biopython genbank parsing written 5 weeks ago by iCosmoso • 0
4
votes
1
answer
121
views
1
answer
Biopython gives ValueError: Sequences must all be the same length even though sequences are of the same length
phylogenetics biopython written 5 weeks ago by KHP • 0 • updated 5 weeks ago by a.zielezinski ♦ 9.1k
2
votes
1
answer
157
views
1
answer
AttributeError: 'list' object has no attribute 'SeqRecord' - Slice multiple sequences with Biopython>SeqIO from fasta file
python sequence biopython seqio written 6 weeks ago by coyot001 • 10
0
votes
0
answers
121
views
0
answers
No output when trying to obtain protein sequence from PDB file
pdb biopython written 7 weeks ago by sayaneshome.rsg • 0 • updated 7 weeks ago by genomax ♦ 80k
6
votes
3
answers
107
views
5 follow
3
answers
How to download from ncbi not a whole FASTA file, but only a certain interval?
fasta R biopython genbank written 7 weeks ago by hazirliver • 10 • updated 7 weeks ago by genomax ♦ 80k
2
votes
1
answer
151
views
1
answer
Download all peptide sequences from NCBI in fasta format?
biopython written 3 months ago by Tom • 30 • updated 7 weeks ago by Biostar ♦♦ 20
2
votes
0
answers
138
views
0
answers
How to remove features from GBK files with biopython ?
biopython written 7 weeks ago by hugo.avila • 10
3
votes
3
answers
279
views
3
answers
Fetching Genbank Assembly IDs with protein
python biopython entrez written 9 weeks ago by anabaena • 0 • updated 8 weeks ago by vkkodali • 1.8k
3
votes
1
answer
88
views
1
answer
Is it possible to pull Genbank ID from RefSeq?
entrez biopython written 8 weeks ago by anabaena • 0 • updated 8 weeks ago by genomax ♦ 80k
1
vote
1
answer
144
views
1
answer
assembly id from protein accession via entrez?
assembly biopython entrez written 8 weeks ago by anabaena • 0
0
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0
answers
100
views
0
answers
Biopython HTTPError when Fetching more than 1400 Entries from NCBI
ncbi biopython eutils written 8 weeks ago by tobias.kraft-blank • 0
1
vote
0
answers
98
views
0
answers
Remove sequence by coordinates with Biopython
fasta biopython written 8 weeks ago by Darill • 40
1
vote
1
answer
1.3k
views
1
answer
TypeError: 'generator' object is unsubscriptable in biopython
biopython written 2.8 years ago by bio90029 • 10 • updated 8 weeks ago by Biostar ♦♦ 20
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