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<prev • 655 results • page 1 of 22 • next >
3
votes
1
answer
131
views
1
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Muscle and clustal alignment using biopython
clustal biopython muscle written 2 days ago by jerald • 0 • updated 2 days ago by Philipp Bayer ♦ 4.3k
4
votes
3
answers
167
views
5 follow
3
answers
calling a function using glob.glob
python glob.glob biopython written 3 days ago by bio90029 • 0
0
votes
1
answer
107
views
1
answer
Locate for pattern in protein sequence with Biopython
fasta pattern matching biopython written 3 days ago by arunprasanna83 • 10 • updated 3 days ago by WouterDeCoster ♦ 19k
10
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1
answer
152
views
1
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Biopython: work with loops and qualifiers from multiple records
genome python biopython gene software error written 4 days ago by dago • 2.2k • updated 4 days ago by Peter ♦ 5.5k
1
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1
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85
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1
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Biopython: Weird error when adding coordinates of two sets
model python biopython structure written 4 weeks ago by souparnoa91 • 10 • updated 4 days ago by Rodrigo • 30
19
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4
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11k
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8 follow
4
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Efficiently Iterating Over Fastq Records From Python
fasta fastq next-gen biopython python sequencing written 5.6 years ago by User 9996 • 760 • updated 10 days ago by blaise.li__biostars • 30
4
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3
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125
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6 follow
3
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Filter all rRNA sequences when doing ribosomal profiling, using rRNA database or GenBank file?
genome next-gen biopython rna-seq sequencing written 12 days ago by AlicePsyche • 20 • updated 12 days ago by Charles Plessy • 2.0k
1
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0
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111
views
0
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Chaos game representation application using Biopython
gene chaos game representation biopython written 15 days ago by lakshmi.bioinformatics • 20
3
votes
1
answer
102
views
1
answer
kegg biopython error in retrieving enzyme record
gene biopython enzyme kegg written 18 days ago by joanarcxavier • 10 • updated 15 days ago by Felix_Sim • 220
2
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0
answers
96
views
0
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extract list of positions from fasta file biopython
python biopython written 17 days ago by s.i.lipworth • 0
1
vote
1
answer
102
views
1
answer
Any good parser with Python??
fasta python gff biopython written 17 days ago by lessismore • 20 • updated 17 days ago by badribio • 100
0
votes
0
answers
68
views
0
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Retrieving CDS sequence for a protein genbank ID
biopython genbank written 17 days ago by alslonik • 0
1
vote
1
answer
81
views
1
answer
TypeError: 'generator' object is unsubscriptable in biopython
biopython written 18 days ago by bio90029 • 0 • updated 18 days ago by WouterDeCoster ♦ 19k
2
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1
answer
83
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1
answer
Printing features of a specific type only from a Genbank file with Biopython
seq biopython genbank seqio written 23 days ago by Jacob • 0 • updated 22 days ago by a.zielezinski ♦ 7.0k
0
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0
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65
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0
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Extracting a Genomic Region From Nucleotide Accession
gene python biopython written 23 days ago by 13dsc • 0
0
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1
answer
99
views
1
answer
Using efetch(biopython) to get the fasta file of an mRNA, as well as the exon locations
python efetch biopython entrez written 24 days ago by Jacob • 0 • updated 23 days ago by Ben • 40
0
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0
answers
84
views
0
answers
Getting Protein GIs from a Nucleotide Range
gene python biopython blast written 26 days ago by 13dsc • 0
0
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0
answers
95
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0
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Create genbank files by plasmid
biopython genbank written 4 weeks ago by james.ryan.hennessy • 0
10
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1
answer
126
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5 follow
1
answer
[BioPython] Parse blast tabular output
python biopython blast written 4 weeks ago by Roxane Boyer • 220 • updated 4 weeks ago by a.zielezinski ♦ 7.0k
1
vote
1
answer
88
views
1
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Biopython: Retrieving atomic coordinates of a model from a pdb file
models python biopython structure written 4 weeks ago by souparnoa91 • 10 • updated 4 weeks ago by Iñigo Prada • 300
6
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2
answers
178
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5 follow
2
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extracting sequences from a fasta file
python biopython written 5 weeks ago by ashish • 100 • updated 5 weeks ago by Buffo • 460
3
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2
answers
1.8k
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2
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Changing the record id in a FASTA file using BioPython
biopython written 22 months ago by Jeroen Van Goey ♦ 2.1k • updated 5 weeks ago by lakshmi.bioinformatics • 20
1
vote
1
answer
118
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1
answer
python script modifications to get tabular output of blast from DEG(database of essential genes)
python database biopython essential genes script written 5 weeks ago by ppnana • 0 • updated 5 weeks ago by jonasmst • 270
3
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1
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1.9k
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1
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Emboss Needle From Biopython, No Output File
windows biopython written 3.4 years ago by Maria • 140 • updated 5 weeks ago by Biostar ♦♦ 20
0
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0
answers
101
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0
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Trying to count number of beta strands in a barrel using biopython, DSSP
beta-strand beta-barrel pdb biopython dssp written 6 weeks ago by u5582440 • 0
3
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2
answers
154
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2
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Supress/silence warnings from BioPython
biopython written 6 weeks ago by jrj.healey • 1.6k
2
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0
answers
209
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5 follow
0
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Fetching corresponding sequences from a fasta file using coordinates
fasta python biopython written 8 weeks ago by sharadlko1 • 0 • updated 7 weeks ago by Biostar ♦♦ 20
2
votes
1
answer
169
views
1
answer
How to run local BLAST (Standalone NCBI BLAST+) with Python?
python biopython blast written 7 weeks ago by iggakami • 0 • updated 7 weeks ago by Chen • 480
3
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2
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191
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5 follow
2
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make blastdb using python
database biopython blast written 8 weeks ago by luoterolb • 0 • updated 8 weeks ago by jrj.healey • 1.6k
5
votes
1
answer
152
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5 follow
1
answer
BioPython Error Messaging
errormessage python biopython error written 8 weeks ago by chrisgbeldam • 20 • updated 8 weeks ago by Bioaln • 150
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