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Course: Applied Statistics and Bioinformatics with R and Bioconductor. (Berlin, 22-26 January 2018)
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Recent Replies
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C: LexWords perl module for ProDeGe software by
kmyers2 • 30
Thank you very much! That's it!
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C: LexWords perl module for ProDeGe software by
Arup Ghosh ♦ 2.1k
I think the module you are looking for is available in this repo: https://bitbucket.org/berkeleyl...
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C: Are there any issues with using sample reads coming from different technologies by
serpalma.v • 30
yes, we just got the new data
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A: how to estimate heterozygosity by sample from a multi-sample vcf file by
trausch • 1.4k
bcftools stats -s - | grep "^PSC"-B 1
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C: Entrez to coordonnates / BED by
Pierre Lindenbaum ♦ 126k
give us some examples please
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C: Blastn command line tab format gives duplicates by
JC ♦ 9.5k
yes, that will show the full alignment in sections, for example, if I modify a little a Ferroxida...
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A: KEGG pathways associated to a gene using BiomaRt by
Asaf ♦ 7.0k
I know it's an old question but wanted to update that `kegg_enzyme` was added to the list of attr...
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A: how to estimate heterozygosity by sample from a multi-sample vcf file by
chrchang523 ♦ 6.5k
`plink2 --vcf --sample-counts cols=hom,het` reports the number of homozygous and heterozygous c...
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C: feature selection using random forest by
dsull • 880
Here's an example: https://topepo.github.io/caret/recursive-feature-elimination.html If you're ...
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C: LexWords perl module for ProDeGe software by
kmyers2 • 30
Thanks. I was afraid of that.
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C: LexWords perl module for ProDeGe software by
ATpoint ♦ 29k
Might be a custom module that the authors developed for that tool. The link in the paper is not e...
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genomax ♦ 78k
What format are you storing your local blast results in? If you add the `-html` option you would ...
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