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Is read trimming needed for WGBS (bisulfite) data?

wgbs alignment trimming bisufite written 3 months ago by Chris Miller ♦ 21k • updated 3 months ago by Devon Ryan ♦ 94k

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1. I have also ran into this. I generally scale data **only for the RNA assay** after integration...
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Sure. Are peaks not called from normalized read pileups? When looking at both a bedGraph and narr...
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possibly here now https://drive5.com/usearch/manual/chimeras.html
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As an aside, are you sure a BED file would even work? I recall running into an issue a few years ...

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