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<prev • 2,224 results • page 1 of 75 • next >
2
votes
0
answers
95
views
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Working with redundant information on BLAST output
filter python blast dictionary written 2 days ago by flogin • 140
0
votes
1
answer
68
views
1
answer
error when running blastn
alignment blast blastn written 1 day ago by stephaniepierson83 • 20 • updated 23 hours ago by brian.fristensky • 40
1
vote
0
answers
54
views
0
answers
Cluster query for BLAST
alignment blast written 1 day ago by vini.guerra87 • 0
2
votes
1
answer
71
views
1
answer
Help making a blast database with longer sequence IDs
mkblastdb fasta sequence protein blast written 2 days ago by ravila • 0
0
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0
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44
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0
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Blastn against multiple fna files --neither makeblastdb nor for loop works
ncbi fasta blast fna blastn written 3 days ago by Metaxo • 0
0
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55
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Filtering tblastn results
genome gene alignment tblastn blast written 4 days ago by juan.crescente • 20
0
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0
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104
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0
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BLAST: find short complementary between two sequences
alignment blast written 8 days ago by QYSunny • 0
15
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0
answers
3.9k
views
9 follow
0
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Tool: BBSketch - A Tool for Rapid Sequence Comparison
minhash sketch bbmap tool blast written 2.5 years ago by Brian Bushnell ♦ 16k • updated 9 days ago by silas.kieser • 0
3
votes
2
answers
599
views
2
answers
Blastx versus nr?
blastx long_time computing_hours blast written 2.1 years ago by Buffo • 1.6k • updated 9 days ago by Biostar ♦♦ 20
6
votes
1
answer
144
views
1
answer
How to download the complete database Nucleotide collection (nr/nt)?
nr/nt collection blast download written 17 days ago by marongiu.luigi • 380 • updated 17 days ago by Fabio Marroni • 2.3k
7
votes
2
answers
148
views
2
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What is the difference between blastx and tblastn?
ncbi bioinformatics sequence blast assembly written 4 weeks ago by Dineshkumar K • 10 • updated 19 days ago by tim.nollan25 • 0
11
votes
1
answer
5.4k
views
1
answer
What Is The Lowest E-Value In Blast When Ncbi Rounds It Down To 0 (Zero)?
blast written 7.2 years ago by a.zielezinski ♦ 8.7k
1
vote
1
answer
160
views
5 follow
1
answer
blastn not returning all the expected results
alignment blast written 29 days ago by selarch • 0 • updated 29 days ago by Michael Dondrup ♦ 46k
0
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0
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65
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0
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Understanding a blast output
xml blast written 29 days ago by carolina.santiago.t • 0 • updated 29 days ago by lakhujanivijay ♦ 4.2k
0
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0
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93
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0
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Filtering for Percentage of identity (sequence identity: pident, %) from tblastn results
sequence pident blast filtering tblastn written 4 weeks ago by endretoth • 0
2
votes
1
answer
96
views
1
answer
Alternative to tblastn in which one can define a custom genetic code
mitochondria alignment genetic code blast written 4 weeks ago by Charles Plessy • 2.7k
1
vote
1
answer
82
views
1
answer
Calculating relative abundance of taxonomies from BLAST output
blast written 4 weeks ago by Ming • 30 • updated 4 weeks ago by 5heikki ♦ 8.4k
0
votes
0
answers
276
views
0
answers
blast makedb database creation error
database blast written 10 weeks ago by menten • 0 • updated 4 weeks ago by Biostar ♦♦ 20
1
vote
1
answer
112
views
1
answer
NCBI BLAST - downloads to only include taxa (no alignments)
blast written 5 weeks ago by genomics Newbie • 20
1
vote
0
answers
115
views
0
answers
Blasting one gene/protein against all complete genomes from bacteria and archaea
genome blast written 5 weeks ago by kilikun • 0
0
votes
1
answer
140
views
1
answer
Local Blast Discrepancies
blast written 5 weeks ago by jturner2 • 0
2
votes
2
answers
361
views
2
answers
Generating Web BLAST output from local BLAST
blast written 14 months ago by dylan.lawrence • 10 • updated 5 weeks ago by Yannick Wurm • 2.3k
20
votes
4
answers
23k
views
4
answers
Idenity, e value or bitscore ?
annotation blast written 3.3 years ago by Leo • 20 • updated 5 weeks ago by alslonik • 100
0
votes
0
answers
105
views
0
answers
Local blastp option -qcov_hsp_perc
genome blast written 5 weeks ago by fec2 • 20
1
vote
0
answers
124
views
0
answers
fast protein search
blast written 5 weeks ago by nheb1977 • 0 • updated 5 weeks ago by darbinator • 190
1
vote
0
answers
103
views
0
answers
sorting blast results by sseq coverage
blast written 5 weeks ago by nheb1977 • 0
4
votes
1
answer
141
views
1
answer
BLAST qcov equals to 0
blast written 3 months ago by Ming • 30 • updated 6 weeks ago by h.mon ♦ 26k
4
votes
1
answer
133
views
1
answer
Diamond results non-specific compared to NCBI Web
ncbi blast diamond blastp written 7 weeks ago by gwrathe • 0 • updated 7 weeks ago by buchfink • 140
1
vote
0
answers
126
views
0
answers
Bin blast results into hit vs. no-hit
blast written 7 weeks ago by jaydu • 0
2
votes
0
answers
1.1k
views
7 follow
0
answers
remote blast requires installation of taxdb database
blast written 21 months ago by hfan22 • 30 • updated 7 weeks ago by Varshney • 20
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