Latest
Open
RNA-Seq
ChIP-Seq
SNP
Assembly
Tutorials
Tools
Jobs
Forum
Planet
All »
Home
Log In
Showing selected topics • reset
or   Classic search
<prev • 2,427 results • page 1 of 81 • next >
10
votes
4
answers
8.4k
views
5 follow
4
answers
How Can I Batch Blast Sequences To Identify Them?
rrna sequence blast written 9.6 years ago by John • 770 • updated 3 days ago by Biostar ♦♦ 20
1
vote
0
answers
1.1k
views
0
answers
Creation of Fasta Database of Bacterial Proteins
fasta blast blastp proteins written 3.6 years ago by rlee03 • 0 • updated 3 days ago by Biostar ♦♦ 20
1
vote
0
answers
57
views
0
answers
News: NCBI Web BLAST now offers RefSeq Select databases for faster searches and better results
news blast written 4 days ago by genomax ♦ 91k
0
votes
0
answers
69
views
0
answers
BLAST search with multile fasta sequences and with a single output
genome blast sequence unix blastn written 10 days ago by endretoth • 20
0
votes
1
answer
510
views
1
answer
Filtering for Percentage of identity (sequence identity: pident, %) from tblastn results
sequence pident blast filtering tblastn written 16 months ago by endretoth • 20
0
votes
1
answer
81
views
1
answer
How to specify cutoff parameters in tblastn?
identity tblastn blast coverage written 12 days ago by priyankamowlali • 0 • updated 12 days ago by lieven.sterck ♦ 8.7k
0
votes
1
answer
84
views
1
answer
Access NCBI blast through command line without downloading entire nr database?
ncbi blast written 16 days ago by allison.sharrar • 0 • updated 16 days ago by genomax ♦ 91k
0
votes
0
answers
69
views
0
answers
Implement blast on a database
database custom blast written 18 days ago by felipead66 • 70
0
votes
1
answer
662
views
1
answer
Is it possible to get taxonomy identifiers from diamond output without using --taxonmap during makedb?
alignment taxonomy protein diamond blast written 10 months ago by O.rka • 210 • updated 20 days ago by Sej Modha ♦ 4.7k
0
votes
1
answer
81
views
1
answer
Blast to return only results with at least two hits?
blast written 21 days ago by zhousun21 • 20 • updated 21 days ago by lieven.sterck ♦ 8.7k
0
votes
0
answers
87
views
0
answers
How to generate a Consensus sequence from SRA BLAST output from web server?
consensus sra ngs sequence blast written 22 days ago by lokdeep17 • 0
0
votes
0
answers
87
views
0
answers
How to determine specific gene sequence from a genome sequence and tblastn results
allele assembly sequence tblastn blast written 23 days ago by missTique • 0
3
votes
1
answer
106
views
1
answer
merging overlaping ranges with GenomicRanges
R genomicranges blast range written 24 days ago by Begonia_pavonina • 20 • updated 24 days ago by Jeremy Leipzig ♦ 19k
0
votes
0
answers
86
views
0
answers
Convert Blast result to Kraken style report - error - which TaxDB?
taxdb report kraken convert blast written 24 days ago by krakenmaken • 0
1
vote
0
answers
102
views
0
answers
News: Primer-BLAST can now design primers for a group of related target sequences!
news primer-blast blast written 27 days ago by genomax ♦ 91k
0
votes
0
answers
118
views
0
answers
blastn --remote option skipping sequences
command-line blast written 28 days ago by eli_bayat • 20
0
votes
0
answers
103
views
0
answers
Remote blast with blast v2.10.1 not working
software error blast written 29 days ago by Dunois • 150
15
votes
1
answer
7.6k
views
1
answer
How to remove contamination from the transcriptome assembly
assembly hiseq reads contamination blast rna-seq written 5.0 years ago by seta • 1.4k • updated 4 weeks ago by Biostar ♦♦ 20
96
votes
2
answers
113k
views
48 follow
2
answers
Blast - Formatting Output
format blast output written 6.9 years ago by timjoncooper • 230 • updated 4 weeks ago by apekshasharma7777 • 0
0
votes
0
answers
85
views
0
answers
Finding the right database for blast CLI
blast written 5 weeks ago by cf556 • 10
0
votes
0
answers
134
views
0
answers
How to decompress the nr database from NCBI
ncbi local blast genbank written 5 weeks ago by albagg1396 • 0 • updated 5 weeks ago by genomax ♦ 91k
3
votes
2
answers
2.5k
views
2
answers
Blast thresholds for orthologs search in bacteria
orthologs bacteria blast written 5.7 years ago by ask • 10 • updated 6 weeks ago by Biostar ♦♦ 20
3
votes
0
answers
208
views
0
answers
News: New web BLAST default parameters and search limits are now in place at NCBI
www-blast ncbi news blast written 4 months ago by genomax ♦ 91k
7
votes
2
answers
250
views
2
answers
Blastn raw illumina reads all-against-all and return only non-hits
illumina reads blast blastn written 8 weeks ago by Bwremjoe • 30
1
vote
1
answer
498
views
1
answer
makeblastdb file file size question.
makeblastdb blast written 6 months ago by Julian.dekker • 10 • updated 7 weeks ago by felix • 0
0
votes
0
answers
104
views
0
answers
Blast templates not found in PSI-TM Coffee
t-coffee alignment protein blast written 8 weeks ago by gabrielpoccia • 0
6
votes
0
answers
141
views
0
answers
Having trouble parsing blast tabular output with awk
tabular blast awk written 8 weeks ago by pawhitesell • 30
2
votes
2
answers
229
views
2
answers
Is there a way to extract the gene product name from the CDS of a BLAST hit?
gene alignment genbank blast biopython written 8 weeks ago by didiDeee • 0 • updated 8 weeks ago by genomax ♦ 91k
0
votes
2
answers
2.5k
views
2
answers
stand alone psi-blast
software error alignment sequence blast written 5.9 years ago by crystalrose • 40 • updated 9 weeks ago by Biostar ♦♦ 20
0
votes
0
answers
131
views
0
answers
A piece of advice on subsetting genomes
fasta genome gff annotations blast written 9 weeks ago by Begonia_pavonina • 20
<prev • 2,427 results • page 1 of 81 • next >
Recent Votes
Recent Locations • All »
  • France/Nantes/Institut du Thorax - INSERM UMR1087, just now
  • India, 1 minute ago
  • India, 3 minutes ago
Recent Awards • All »
Recent Replies
Content
Help
Access
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 1715 users visited in the last hour