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<prev • 2,126 results • page 1 of 71 • next >
2
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1
answer
70
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1
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Taxid will not function with other databases (including custom)
blast blast+ linux written 3 days ago by emilychase • 0 • updated 3 hours ago by gb • 480
0
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0
answers
109
views
0
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BLAST against cancer genome
gene genome blast cancer written 2 days ago by mhasa006 • 30
3
votes
1
answer
82
views
1
answer
Converting Blast output to GFF
genome assembly blast written 3 days ago by ahmad mousavi • 310 • updated 3 days ago by h.mon ♦ 21k
1
vote
1
answer
78
views
1
answer
Graphical output of Blast. What are grey and black lines?
gaphical output blast written 4 days ago by english.server • 80 • updated 4 days ago by sangram_keshari • 110
2
votes
0
answers
733
views
0
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Diamond annotation versus Kallisto/Sleuth
R rna-seq blast sequencing written 19 months ago by BioBing • 100 • updated 4 days ago by zx8754 ♦ 5.7k
4
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1
answer
81
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1
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Working backwards - How do I retrieve transcripts from a primer list using sequence and amplicon length?
alignment primer blast transcriptome written 5 days ago by dacotahm • 10 • updated 5 days ago by h.mon ♦ 21k
4
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1
answer
104
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1
answer
How to identify species specific genes?
gene species specific gene blast written 5 days ago by KG • 10
0
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2
answers
687
views
2
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Annotate SNPs called from Trinity transcriptome assembly using annotations from Trinotate pipeline
assembly rna-seq blast written 14 months ago by TrentGenomics • 30 • updated 6 days ago by jfo • 0
3
votes
1
answer
176
views
5 follow
1
answer
BLAST all against all
alignment all against all blast written 11 days ago by hala.elbarbary • 0 • updated 10 days ago by jrj.healey ♦ 8.7k
21
votes
2
answers
685
views
5 follow
2
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(solved) I couldn't reproduce the problem of max_target_seqs
blast written 6 weeks ago by fishgolden • 260
1
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0
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104
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0
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Cluster plasmids of (very) different lengths
sequence clustering blast written 19 days ago by predeus • 690
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0
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1.4k
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0
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tblastx in blast+ gives an error regareding a DB alias but blastall works fine
software error blast written 4.3 years ago by angel • 0 • updated 20 days ago by Biostar ♦♦ 20
37
votes
6
answers
9.5k
views
11 follow
6
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How To Blast A Sequence Against Multiple Databases
blast written 7.1 years ago by Manju • 40 • updated 21 days ago by Biostar ♦♦ 20
0
votes
0
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99
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0
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When will the blast program stops giving out hits if there are too many (for web server and standalone)
blast written 24 days ago by johnnytam100 • 90
0
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0
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86
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0
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Multi Blast NCBIWWW Filtering Human Genome and excluding Models and Uncultured sample sequences
ncbiwww biopython blast written 26 days ago by malj • 10
0
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0
answers
79
views
0
answers
Database not showing when running BLAST+ on Galaxy
galaxy sequence blastx blast written 26 days ago by chrismanuel1993 • 0
3
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2
answers
180
views
2
answers
Blast Multi queries output
biopython blast written 28 days ago by malj • 10
7
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5
answers
11k
views
11 follow
5
answers
how to parse blast output using biopython
biopython blast written 4.6 years ago by camilla.borgonuovo • 10 • updated 28 days ago by malj • 10
0
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0
answers
116
views
0
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Coordinates for Gene in Unannotated Reference FASTA
annotation blast blat written 4 weeks ago by gtasource • 20
1
vote
1
answer
100
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1
answer
how to compare proteomics data?
proteomics proteome protein blast written 4 weeks ago by siinemselvi • 0
4
votes
1
answer
146
views
1
answer
compare two list of nucleotide sequences
mummer sequence blast bowtie written 5 weeks ago by karthic • 90 • updated 5 weeks ago by jrj.healey ♦ 8.7k
0
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0
answers
92
views
0
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Local BLAST - exclude models
blast written 5 weeks ago by benorgi • 0
0
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0
answers
136
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0
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GPU-blast -> write PSI-blast yourself [help me understand the algoritm]
algoritm protein gpu-blast blast psi-blast written 5 weeks ago by Xylanaser • 10
18
votes
4
answers
931
views
6 follow
4
answers
News: Misunderstood parameter of NCBI BLAST
news alignment blast written 7 weeks ago by Farbod • 3.2k
4
votes
0
answers
181
views
0
answers
News: -max_target_seqs 1 in NCBI standalone BLAST does not do what you think it does
software error news blast written 5 weeks ago by 5heikki ♦ 7.8k • updated 5 weeks ago by Devon Ryan ♦ 86k
0
votes
1
answer
129
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1
answer
tblastn cuts querry even when alligment cut be better if extended
ncbi tblastn blast written 11 weeks ago by john • 70 • updated 5 weeks ago by lieven.sterck • 3.1k
7
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3
answers
7.9k
views
8 follow
3
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How To Create A Pssm From Fasta Homologues With Ncbi Blast+ 2.2.23
ncbi pssm blast written 8.1 years ago by Michael Schubert • 6.8k • updated 5 weeks ago by mjavad2012 • 0
1
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1
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123
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1
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Trouble installing and creating database for blast
fasta ubuntu blast written 5 weeks ago by asidhu • 0 • updated 5 weeks ago by Vijay Lakhujani ♦ 3.2k
13
votes
5
answers
2.8k
views
11 follow
5
answers
An Alternative To Blastx With Speed Similar To Bowtie
nucleotide alignment protein blast bowtie written 6.8 years ago by Tianyang Li • 490 • updated 5 weeks ago by h.mon ♦ 21k
11
votes
1
answer
325
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7 follow
1
answer
Missing sequences in local NT database
ncbi nt blast blastdbcmd written 6 weeks ago by Prakki Rama • 2.2k • updated 6 weeks ago by lieven.sterck • 3.1k
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