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<prev • 2,184 results • page 1 of 73 • next >
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Trouble with BLAST using Biopython
ncbi python blast written 6 hours ago by tpaisie • 70
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43
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BLAST qcov equals to 0
blast written 1 day ago by Ming • 20
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42
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1
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nr database "No alias or index file found for protein database"
command line blast written 2 days ago by semans • 0
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1
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202
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5 follow
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comparing an assembly against close relatives
de-novo assembly blast trinity written 14 days ago by Assa Yeroslaviz • 1.2k • updated 5 days ago by colindaven • 1.2k
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94
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How blastn deal with intron and exons?
blast blastn genomics written 6 days ago by flogin • 50
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Repeatmasker Crashes Before End Of Run With "Can'T Fork..."
makeblastdb repeats alignment repeatmasker blast written 7.4 years ago by User 9996 • 800 • updated 6 days ago by Biostar ♦♦ 20
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103
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Limiting the number of hits in a Biopython NCBIWWW Search
python ncbiwww hitlist_size blast biopython written 11 days ago by matthewcgchase • 0
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2
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2
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Combining stats of multiple BLAST queries
sequence alignment blast written 4.7 years ago by vivekraiiitkgp • 50 • updated 12 days ago by Biostar ♦♦ 20
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1
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576
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1
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step by step BlastX against nr using Amazon cloud
annotation cloud blast written 17 months ago by Farbod • 3.2k • updated 13 days ago by Abhishek • 20
2
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0
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126
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Is it possible to print DNA sequences of subject organism in tblastn?
blast alignment tblastn sequence analysis script written 13 days ago by Dineshkumar K • 10
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1
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129
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1
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Extracting the aligned sequence from a BLAST output in a multi-fasta file
blast written 14 days ago by Ming • 20 • updated 14 days ago by flogin • 50
13
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3
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31k
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3
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BLAST Database error: No alias or index file found for nucleotide database
makeblastdb sift blast blastn written 4.5 years ago by arronslacey • 240 • updated 15 days ago by RamRS ♦ 21k
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148
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BLAST Database error: No GIs were found in BLAST database
next-gen blast written 8 weeks ago by anasofiamoreira94 • 30 • updated 15 days ago by Biostar ♦♦ 20
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1
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93
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1
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error installation rmblast
blast repeatmasker written 16 days ago by frida • 0 • updated 16 days ago by ATpoint ♦ 15k
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2
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2
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NCBI Accession Number to Taxonomy ID
ncbi 16s blast written 4 months ago by mrsmith • 10 • updated 18 days ago by Ming • 20
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2
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1.6k
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2
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Can Ncbi Blast Only Search A Special Region In Database For Hits?
ncbi blast written 6.5 years ago by litiancheng.gansu • 10 • updated 23 days ago by vkkodali • 1.1k
22
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3
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6 follow
3
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(solved) I couldn't reproduce the problem of max_target_seqs
blast written 6 months ago by fishgolden • 370 • updated 24 days ago by gb • 610
1
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1
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122
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1
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How to retrieve large among of fasta file from NCBI by GIDs
blast functional annotation written 29 days ago by yhuang690 • 0 • updated 29 days ago by h.mon ♦ 24k
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1
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110
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1
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Check Conservation of a Given Protein Domain
blast written 4 weeks ago by DVA • 510 • updated 4 weeks ago by Bill Pearson • 860
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0
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160
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How to specify/calculate subject coverage of the alignment (alignment of query[protein sequence] and subject[Nucleotide sequence]) in tBLASTn?
bioinformatics alignment tblastn blast written 5 weeks ago by Dineshkumar K • 10
2
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1
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2.6k
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1
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BLASTp in python (solved)
python blastp blast written 3.5 years ago by albert.castella.teruel • 0 • updated 5 weeks ago by sambioinfo2018 • 0
3
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1
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3.1k
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1
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Filter command-line BLAST results by organism
genome alignment taxonomy blast written 4.5 years ago by jdromano2 • 10 • updated 5 weeks ago by Biostar ♦♦ 20
6
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3
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2.0k
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7 follow
3
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How to perform bidirectional BLAST?
bidirectional blast written 22 months ago by Paul • 70 • updated 5 weeks ago by Biostar ♦♦ 20
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196
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Can you use blastn only with one sequence from the database?
alignment blast written 5 weeks ago by Char20773 • 0
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0
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2.1k
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0
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Get ASCII-format PSSM from web PSIBLAST
pssm psiblast blast written 3.6 years ago by fvillanelo • 0 • updated 6 weeks ago by gaiboyan23 • 0
1
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2
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182
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2
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Aligning two DNA sequences with nBLAST
ncbi igb blast written 6 weeks ago by sj93 • 10 • updated 6 weeks ago by pltbiotech_tkarthi • 170
1
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1
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153
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1
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Can I align two DNA sequences using BLAST from command line?
ncbi genome sequence blast snp written 6 weeks ago by sj93 • 10 • updated 6 weeks ago by nsmi8446 • 110
1
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1
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84
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1
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What kind of BLAST to use in Gene Ontology?
alignment protein gene ontology blast written 6 weeks ago by l.souza • 70 • updated 6 weeks ago by Bill Pearson • 860
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1
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94
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1
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How to dissolve blastn alignment result predicted locally
alignment sequence blast written 6 weeks ago by Neu • 10 • updated 6 weeks ago by i.sudbery ♦ 4.3k
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0
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Convert Blast-output fotmat 5 (xml) to tabular format
blast written 2.3 years ago by nut_B • 10 • updated 6 weeks ago by Biostar ♦♦ 20
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