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<prev • 49 results • page 1 of 2 • next >
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Assemble A1 and A2 reads using Trinity before running blastx on them
assembly blastx trinity written 21 days ago by kmkdesilva • 80
1
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1
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154
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1
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Question about blastx output
assembly blastx rna-seq trinity written 4 months ago by yinbinqiu • 0
2
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2
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188
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6 follow
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How to get 1 top hit only for each query in blastx
blastx blast rna-seq written 4 months ago by 2822462298 • 50 • updated 4 months ago by Fatima • 590
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177
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BlastX Database: output search is empty
blastx database search error written 5 months ago by marongiu.luigi • 520
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0
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165
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B2G missing GO terms
blastx go b2g written 7 months ago by mgoldste • 0
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251
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1
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mpiblast returning an error with a specific FASTA file - Unable to open files
blastx mpiblast blast written 11 months ago by Light92 • 20
3
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2
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779
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2
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Blastx versus nr?
blastx long_time computing_hours blast written 3.1 years ago by Buffo • 1.8k • updated 12 months ago by Biostar ♦♦ 20
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325
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RepeatExplorer error during blastx parsing
R blastx repeatexplorer written 13 months ago by kaleb.gatto • 0
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395
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Getting protein fasta from RNAseq BAM file (human) paying attention on repeats
fasta repeats bam blastx rna-seq written 18 months ago by pauli.pauli • 0 • updated 18 months ago by RamRS ♦ 27k
2
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1
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310
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1
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blastx to compute complete, partial or missing genes
gene blastx blast written 18 months ago by Mbillah • 110 • updated 18 months ago by lieven.sterck ♦ 8.0k
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1
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8 follow
1
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trying to use gnu parallel and blast
gnu parallel parallel blastx blast optimization written 3.1 years ago by pablo61991 • 70 • updated 19 months ago by Giuseppe • 0
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1
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411
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1
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mRNA / Protein Annotation questions - etiquette and consensus
genome out-dated blastx re-annotation blastp written 19 months ago by Biogeek • 400 • updated 19 months ago by lieven.sterck ♦ 8.0k
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385
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Database not showing when running BLAST+ on Galaxy
galaxy sequence blastx blast written 20 months ago by chrismanuel1993 • 0
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1.9k
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Going from BlastX to GO annotation
annotation blastx go ontology written 4.4 years ago by Biogeek • 400 • updated 21 months ago by RamRS ♦ 27k
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1
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How to specify organism taxa in biopythons remote blast cmd?
biopyhon blastx written 22 months ago by tim.ivanov.92 • 10
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987
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5 follow
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local blastx output
blastx written 23 months ago by agata88 • 800
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0
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655
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How to extract the sequences of the best orf in blastx?
blastx written 2.4 years ago by danielconejera • 0
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741
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How to retain transcripts from blastx output at a given coverage?
assembly blastx rna-seq trinity written 2.4 years ago by unawaz • 50
2
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1
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975
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1
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blastx results: small letters with gray color?
blastx written 2.6 years ago by madiha_shabbir46 • 0
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1
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692
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1
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what happens when blast is run with default query "-"?
blastx blast written 2.7 years ago by chefarov • 130
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1.0k
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No. of blast hits uploaded in Blast2GO does not match with the actual number of hits in the diamond output xml file
blast2go blastx .xml diamond written 2.8 years ago by MSM55 • 130
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1.1k
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finding NCBI protein ID and associated COG ID
nr database blastx cog written 3.0 years ago by bitpir • 180
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1
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1.9k
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1
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Using UniProt's Retrieve/ID mapping service programmatically to retrieve Taxonomy from ACC_ID
taxonomy blastx uniprot written 3.1 years ago by ladypurrsia • 40 • updated 3.1 years ago by Elisabeth Gasteiger • 1.7k
2
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1
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1.2k
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1
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Retrieving Taxonomy from Uniprot/Swissprot ACC_ID From Blastx Results
taxonomy blastx uniprot written 3.1 years ago by ladypurrsia • 40
2
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1
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1.3k
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1
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Can't grep qseqid (column 1) from blastx outfmt6
fasta blastx outfmt6 written 3.2 years ago by ladypurrsia • 40 • updated 3.2 years ago by Joe ♦ 17k
2
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0
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1.5k
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How to convert a database from protein to nucleotide
bioinformatics blastn blastx unix blast written 3.3 years ago by AJTrunkskun94 • 0 • updated 3.3 years ago by WouterDeCoster ♦ 44k
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1.7k
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Error in blastx with nr database
nr database blastx attempt to access null pointer written 3.3 years ago by mirza • 110 • updated 3.3 years ago by genomax ♦ 85k
2
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1
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1.3k
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1
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ORFs from blastx results
orf coding sequence blastx rna-seq written 3.6 years ago by giulia.zancolli • 0 • updated 3.6 years ago by abascalfederico • 1.1k
1
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1
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1.2k
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1
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blastx output cut-off for creating gff
gff blastx ngs written 3.6 years ago by Whoknows • 800
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2
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1.3k
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2
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please share your experience for ORF prediction +blastp instead of doing blastx
blast alignment blastx orf prediction blastp written 4.8 years ago by seta • 1.3k • updated 3.6 years ago by colindaven • 2.3k
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