Latest
Open
RNA-Seq
ChIP-Seq
SNP
Assembly
Tutorials
Tools
Jobs
Forum
Planet
All »
Home
Log In
Showing: blastx • reset
or   Classic search
<prev • 31 results • page 1 of 2 • next >
0
votes
0
answers
110
views
0
answers
finding NCBI protein ID and associated COG ID
nr database blastx cog written 6 weeks ago by bitpir • 30
4
votes
1
answer
250
views
6 follow
1
answer
trying to use gnu parallel and blast
gnu parallel parallel blastx blast optimization written 9 weeks ago by pablo61991 • 30
0
votes
1
answer
155
views
1
answer
Using UniProt's Retrieve/ID mapping service programmatically to retrieve Taxonomy from ACC_ID
taxonomy blastx uniprot written 10 weeks ago by ladypurrsia • 0 • updated 9 weeks ago by Elisabeth Gasteiger • 1.2k
2
votes
1
answer
139
views
1
answer
Retrieving Taxonomy from Uniprot/Swissprot ACC_ID From Blastx Results
taxonomy blastx uniprot written 10 weeks ago by ladypurrsia • 0
3
votes
2
answers
163
views
2
answers
Blastx versus nr?
blastx long_time computing_hours blast written 12 weeks ago by Buffo • 470 • updated 12 weeks ago by Jacob Warner • 370
2
votes
1
answer
204
views
1
answer
Can't grep qseqid (column 1) from blastx outfmt6
fasta blastx outfmt6 written 4 months ago by ladypurrsia • 0 • updated 4 months ago by jrj.healey • 2.1k
2
votes
0
answers
263
views
0
answers
How to convert a database from protein to nucleotide
bioinformatics blastn blastx unix blast written 5 months ago by AJTrunkskun94 • 0 • updated 5 months ago by WouterDeCoster ♦ 21k
1
vote
0
answers
265
views
0
answers
Error in blastx with nr database
nr database blastx attempt to access null pointer written 5 months ago by mirza • 70 • updated 5 months ago by genomax ♦ 32k
2
votes
1
answer
354
views
1
answer
ORFs from blastx results
orf coding sequence blastx rna-seq written 8 months ago by giulia.zancolli • 0 • updated 8 months ago by abascalfederico • 970
1
vote
1
answer
374
views
1
answer
blastx output cut-off for creating gff
gff blastx ngs written 9 months ago by Whoknows • 580
0
votes
2
answers
609
views
2
answers
please share your experience for ORF prediction +blastp instead of doing blastx
blast alignment blastx orf prediction blastp written 23 months ago by seta • 920 • updated 9 months ago by colindaven • 260
0
votes
1
answer
314
views
1
answer
Easier way to filter contaminants based on protein similarity ?
trembl blastx diamond uniprot written 9 months ago by Biogeek • 240 • updated 9 months ago by Elisabeth Gasteiger • 1.2k
1
vote
0
answers
344
views
0
answers
Output blastx top hits as fasta of the original sequences
blastx blast written 11 months ago by bonsalldavid • 0
6
votes
3
answers
407
views
3
answers
Blastx No hit query?
blastx outfmt6 nohit written 13 months ago by Buffo • 470
0
votes
1
answer
351
views
1
answer
blast x results - some making no sense
blastx written 13 months ago by Biogeek • 240 • updated 13 months ago by Chris Fields • 1.7k
2
votes
1
answer
537
views
1
answer
blastx generates empty output file
annotation blastx blast rna-seq written 17 months ago by dovi • 20
0
votes
1
answer
387
views
1
answer
How to get blastx top hit (e-score)
blastx besthit written 17 months ago by Biogeek • 240 • updated 17 months ago by Dan Gaston ♦ 6.8k
0
votes
1
answer
566
views
1
answer
Annotating the transcripts of a de novo plant transcriptome
standalone annotation blastx plant transcriptome written 19 months ago by Biogeek • 240 • updated 18 months ago by JC ♦ 6.1k
0
votes
0
answers
700
views
0
answers
Going from BlastX to GO annotation
annotation blastx go ontology written 18 months ago by Biogeek • 240
1
vote
1
answer
605
views
1
answer
The most popular GO annotation tool
transcriptome assembly gene ontology blastx written 18 months ago by seta • 920 • updated 18 months ago by Juke-34 • 960
2
votes
1
answer
1.0k
views
1
answer
OID not found
oid blastx blast blastdbcmd written 20 months ago by arashrostamiazar • 0 • updated 20 months ago by Ahill • 900
0
votes
1
answer
664
views
1
answer
Why there is some discrepancy between blastx and blastp outputs?
transdecoder alignment blastx blastp written 22 months ago by seta • 920 • updated 22 months ago by Michael Dondrup ♦ 42k
0
votes
0
answers
752
views
0
answers
How to compare contigs with an existing protein from a species ?
contig sequence blastx dna written 2.5 years ago by carerjose • 0 • updated 2.3 years ago by Biostar ♦♦ 20
0
votes
0
answers
859
views
0
answers
Annotation of miRNA targets
blastx mirna written 2.3 years ago by The Last Word • 100
1
vote
1
answer
1.4k
views
1
answer
how to extract blastxed sequences' corresponding amino acid sequences
sequence blastx blast written 2.4 years ago by Kurban • 160 • updated 2.4 years ago by mxs • 510
1
vote
0
answers
942
views
0
answers
Convert BlastX -m 6 output to -m 7 output for MEGAN
blastx megan written 2.7 years ago by niu2rseq • 70 • updated 2.5 years ago by 5heikki ♦ 6.5k
3
votes
1
answer
1.2k
views
1
answer
Standalone blast results wrong
blastx blast written 2.9 years ago by biobio • 30 • updated 2.8 years ago by Michael Dondrup ♦ 42k
0
votes
0
answers
2.0k
views
0
answers
Is there a way to run ncbi blastx so that its result will contain GO (gene ontology) terms for each hit?
gene ontology blastx blast go rna-seq written 3.0 years ago by whatup • 30
1
vote
0
answers
1.6k
views
0
answers
Remote blast+ skipping query sequences
blastx blast written 3.1 years ago by biobio • 30 • updated 3.0 years ago by Biostar ♦♦ 20
2
votes
1
answer
983
views
1
answer
Find the best hit of heterologous protein in blastx results
hit blastx heterologous proteins written 3.1 years ago by arronar • 50 • updated 3.1 years ago by Pierre Lindenbaum ♦ 96k
<prev • 31 results • page 1 of 2 • next >
Recent Votes
Recent Locations • All »
  • Finland, just now
  • United States, 2 minutes ago
  • Japan, 3 minutes ago
  • Germany, 3 minutes ago
Recent Awards • All »
Recent Replies
Content
Help
Access
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 1254 users visited in the last hour